Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013244A_C01 KMC013244A_c01
(595 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM64933.1| photolyase/blue-light receptor PHR2 [Arabidopsis ... 192 3e-48
ref|NP_182281.1| photolyase/blue-light receptor (PHR2); protein ... 192 3e-48
prf||1604369A sulfated surface glycoprotein SSG185 74 1e-12
sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185)... 74 1e-12
emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox... 73 3e-12
>gb|AAM64933.1| photolyase/blue-light receptor PHR2 [Arabidopsis thaliana]
Length = 447
Score = 192 bits (488), Expect = 3e-48
Identities = 104/181 (57%), Positives = 131/181 (71%), Gaps = 4/181 (2%)
Frame = +3
Query: 63 MESNSQVPPPSSEKDNNVDQKPLPSEPSPFAVASLSLSLSTILPFVQPKFPSSSSPQQ-- 236
M+S++ + E + +Q PL S +ASLSL+L FPSS+ +
Sbjct: 1 MDSSNVEENLNPETKSAEEQNPLAIFHSSLPIASLSLTL----------FPSSTQFLKLF 50
Query: 237 --QPNKVKVPTQASTLTHLSLSTTTSPSPPKSSFKSTLSANPLRAPHSLGPRRPLEPSSA 410
PNKVK+PTQAS+LTHLSLS+ + + SFKST++ANPL++P S+ PRRP++PSSA
Sbjct: 51 AHHPNKVKIPTQASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSA 110
Query: 411 AALRRASIVWFRNDLRVRDNETLNTANNESVSVLPVYCFDPADYGKSSSGFDKTGPYRAA 590
AALRRA++VWFRNDLRV DNE LN+AN+E VSVLPVYCFDP DYGKSSSGFDKTGP+RA
Sbjct: 111 AALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQ 170
Query: 591 F 593
F
Sbjct: 171 F 171
>ref|NP_182281.1| photolyase/blue-light receptor (PHR2); protein id: At2g47590.1,
supported by cDNA: 34800., supported by cDNA: gi_3319287
[Arabidopsis thaliana] gi|7484906|pir||T00425
photolyase/blue-light receptor (PHR2) [imported] -
Arabidopsis thaliana gi|2529668|gb|AAC62851.1|
photolyase/blue-light receptor (PHR2) [Arabidopsis
thaliana] gi|3319288|gb|AAC26199.1| photolyase/blue
light photoreceptor PHR2 [Arabidopsis thaliana]
Length = 447
Score = 192 bits (488), Expect = 3e-48
Identities = 104/181 (57%), Positives = 131/181 (71%), Gaps = 4/181 (2%)
Frame = +3
Query: 63 MESNSQVPPPSSEKDNNVDQKPLPSEPSPFAVASLSLSLSTILPFVQPKFPSSSSPQQ-- 236
M+S++ + E + +Q PL S +ASLSL+L FPSS+ +
Sbjct: 1 MDSSNVEENLNPETKSAEEQNPLAIFHSSLPIASLSLTL----------FPSSTQFLKLF 50
Query: 237 --QPNKVKVPTQASTLTHLSLSTTTSPSPPKSSFKSTLSANPLRAPHSLGPRRPLEPSSA 410
PNKVK+PTQAS+LTHLSLS+ + + SFKST++ANPL++P S+ PRRP++PSSA
Sbjct: 51 AHHPNKVKIPTQASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSA 110
Query: 411 AALRRASIVWFRNDLRVRDNETLNTANNESVSVLPVYCFDPADYGKSSSGFDKTGPYRAA 590
AALRRA++VWFRNDLRV DNE LN+AN+E VSVLPVYCFDP DYGKSSSGFDKTGP+RA
Sbjct: 111 AALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQ 170
Query: 591 F 593
F
Sbjct: 171 F 171
>prf||1604369A sulfated surface glycoprotein SSG185
Length = 453
Score = 73.9 bits (180), Expect = 1e-12
Identities = 41/106 (38%), Positives = 48/106 (44%), Gaps = 4/106 (3%)
Frame = +1
Query: 187 SSPSSNP----NSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSPPT 354
S P+ NP ++ LP + PT S P PPPSP SPPPP P P PP PP PP
Sbjct: 213 SGPNVNPIGPAPNNSPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPP 272
Query: 355 PSAPLTP*APAAPSSLPAPPHSGAPPSSGSATTSAFATTRLSTPPT 492
P P P P P P PP PPS + + PP+
Sbjct: 273 PPPPSPPPPPPPP---PPPPPPPPPPSPSPPRKPPSPSPPVPPPPS 315
Score = 69.3 bits (168), Expect = 3e-11
Identities = 40/105 (38%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = +1
Query: 175 HSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSPPT 354
++ P PS P + P R S P P PSP PPPP P P PPS PP PP
Sbjct: 225 NNSPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPP 284
Query: 355 PSAPLTP*APAAPSSLPAPPHSG----APPSSGSATTSAFATTRL 477
P P P P +PS PP PPS + T S A R+
Sbjct: 285 PPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSPSAVTISGGAGERV 329
Score = 62.4 bits (150), Expect = 4e-09
Identities = 37/93 (39%), Positives = 43/93 (45%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P +P+ P P P PPPSP PPPP PP PP P
Sbjct: 246 PSPRPPSPPPPSPS-----PPPPPPPPPPPPPPPPPSPPPPPPPPP------PPPPPPPP 294
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPPSSGSA 447
P+PS P P +P+ P +P PP A SG A
Sbjct: 295 PSPSPPRKPPSPSPP--VPPPPSPSAVTISGGA 325
Score = 52.8 bits (125), Expect = 3e-06
Identities = 31/79 (39%), Positives = 36/79 (45%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPS 345
SP P PS +P P P S P PPP P PPPP P P+PP PPS
Sbjct: 247 SPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPPP-PPPPPPPPSPSPPRKPPS 305
Query: 346 PPTPSAPLTP*APAAPSSL 402
P P P P +PS++
Sbjct: 306 PSPPVPP-----PPSPSAV 319
>sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185) gi|99441|pir||A33647
sulfated surface glycoprotein 185 - Volvox carteri
gi|1405821|emb|CAA35953.1| SULFATED SURFACE GLYCOPROTEIN
185 [Volvox carteri]
Length = 485
Score = 73.9 bits (180), Expect = 1e-12
Identities = 41/106 (38%), Positives = 48/106 (44%), Gaps = 4/106 (3%)
Frame = +1
Query: 187 SSPSSNP----NSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSPPT 354
S P+ NP ++ LP + PT S P PPPSP SPPPP P P PP PP PP
Sbjct: 213 SGPNVNPIGPAPNNSPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPP 272
Query: 355 PSAPLTP*APAAPSSLPAPPHSGAPPSSGSATTSAFATTRLSTPPT 492
P P P P P P PP PPS + + PP+
Sbjct: 273 PPPPSPPPPPPPP---PPPPPPPPPPSPSPPRKPPSPSPPVPPPPS 315
Score = 68.2 bits (165), Expect = 8e-11
Identities = 45/132 (34%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 175 HSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSPPT 354
++ P PS P + P R S P P PSP PPPP P P PPS PP PP
Sbjct: 225 NNSPLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPP 284
Query: 355 PSAPLTP*APAAPS--------SLPAPPHSGAPPSSGSATTSAFATTRLSTPPTTNRSQF 510
P P P P +PS S P PP +PPS A T +S P++ +
Sbjct: 285 PPPPPPPPPPPSPSPPRKPPSPSPPVPP-PPSPPSVLPAATGFPFCECVSRSPSSYPWRV 343
Query: 511 YLSTASTLRITG 546
++ S + I+G
Sbjct: 344 TVANVSAVTISG 355
Score = 57.4 bits (137), Expect = 1e-07
Identities = 36/83 (43%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHP-RRPNPPSNPP- 342
P PPS P +P+ P P P PPPSP PPPP P P PPS P
Sbjct: 246 PSPRPPSPPPPSPS-----PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPP 300
Query: 343 -SPPTPSAPLTP*APAAPSSLPA 408
PP+PS P+ P P+ PS LPA
Sbjct: 301 RKPPSPSPPVPP-PPSPPSVLPA 322
>emb|CAB62280.1| hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f.
nagariensis]
Length = 409
Score = 72.8 bits (177), Expect = 3e-12
Identities = 41/108 (37%), Positives = 47/108 (42%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P H PP P P LP + +P P PPP P PPPP P PP PP P
Sbjct: 63 PEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPP 122
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPPSSGSATTSAFATTRLSTPPT 492
P+P P P P P+ P PP PP S S S + S PP+
Sbjct: 123 PSPPPPPPPPPPPPPNPPPPPP---PPPPSPSPPPSPPPSPPPSPPPS 167
Score = 70.5 bits (171), Expect = 2e-11
Identities = 41/93 (44%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNP-- 339
SP SPP SP P P P+ S P+PPP PP P P RP PP+ P
Sbjct: 195 SPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPRPPPPAPPPP 254
Query: 340 -PSPPTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
P PP+P PL P P+ P LP PP S PPS
Sbjct: 255 RPPPPSPPPPLPP-PPSPPPPLPPPP-SPPPPS 285
Score = 68.6 bits (166), Expect = 6e-11
Identities = 37/89 (41%), Positives = 38/89 (42%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P SPP P P P S P PPP P SPPPP P P PP NPP P
Sbjct: 83 PSPSPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPP 142
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
P P P P+ P S P P PPS
Sbjct: 143 PPPPPPSPSPPPSPPPSPPPSPPPSPPPS 171
Score = 68.6 bits (166), Expect = 6e-11
Identities = 42/99 (42%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPK----PPPSPTSHSPPPPHPR--RPNP 327
SP SPP P +PN P + +P + P+ PPPSP PPPP P RP P
Sbjct: 199 SPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPRPPPPAPPPPRPPP 258
Query: 328 PSNP---PSPPTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
PS P P PP+P PL P P +P PP S PPS
Sbjct: 259 PSPPPPLPPPPSPPPPLPP--PPSPPPPSPPPPSPLPPS 295
Score = 67.0 bits (162), Expect = 2e-10
Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P +P P +P + PPP+P PPPP P P PP PPSP
Sbjct: 279 PSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPP--PPSP 336
Query: 349 PTP-SAPLTP*APAAPSSLPAPPHSGAPPS 435
P P P +P P P P+PP PPS
Sbjct: 337 PPPRPPPPSPNPPRPPPPSPSPPKPPPPPS 366
Score = 65.9 bits (159), Expect = 4e-10
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPH-PRRPNPPSNPPS 345
P PP P P+ P P QP PPSP+ PPPP P P PP PP
Sbjct: 48 PGTPPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVPPPPPPPPPPPP 107
Query: 346 PPTPSAPLTP*APAAPSSLPAPPHSGAPP 432
PP+P P P P PS P PP PP
Sbjct: 108 PPSPPPPPPPPPPPPPSPPPPPPPPPPPP 136
Score = 65.9 bits (159), Expect = 4e-10
Identities = 39/103 (37%), Positives = 45/103 (42%)
Frame = +1
Query: 181 PPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSPPTPS 360
PP SP P P + P P PPP P PPPP P P+PP +PP P PS
Sbjct: 107 PPPSPPPPPPPPPPPPPSPPPP---PPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSPPPS 163
Query: 361 APLTP*APAAPSSLPAPPHSGAPPSSGSATTSAFATTRLSTPP 489
P +P PS P+PP S P S S + S PP
Sbjct: 164 PPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPPP 206
Score = 65.5 bits (158), Expect = 5e-10
Identities = 43/112 (38%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRP--NPPSN- 336
SP PP P P P P+ P PPP P S PPPP P P NPP
Sbjct: 84 SPSPPPPPPPPVPPPPPPPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPP 143
Query: 337 PPSPPTPSAPLTP*APAAPSSLPAPPHSGAPPSSGSATTSAFATTRLSTPPT 492
PP PP+PS P +P PS P+PP S P S S S PP+
Sbjct: 144 PPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPS 195
Score = 65.1 bits (157), Expect = 6e-10
Identities = 34/88 (38%), Positives = 42/88 (47%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P +P LP + P + P P P +PPPP P P+P NPP P
Sbjct: 274 PLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSP--NPPRP 331
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPP 432
P PS P P +P+ PP S +PP
Sbjct: 332 PPPSPPPPRPPPPSPNPPRPPPPSPSPP 359
Score = 64.3 bits (155), Expect = 1e-09
Identities = 40/87 (45%), Positives = 45/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 181 PPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPN--PPSNPPSPPT 354
PP SPS P+ P + P+ P PPPSP PP P PR P PPS PPSPP
Sbjct: 146 PPPSPSPPPSPPPSPPPSPPPS---PPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPP 202
Query: 355 PSAPLTP*APAAPSSLPAPPHSGAPPS 435
P P +P PS P PP S +PPS
Sbjct: 203 SPPPRPPPSPNPPS--PRPP-SPSPPS 226
Score = 63.9 bits (154), Expect = 1e-09
Identities = 39/94 (41%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSP--PPPHPRRPNPPSNPP 342
P PP P P + P P P PPPSP P PPP P PPS PP
Sbjct: 123 PSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPPPSPPPSPPPSPPP 182
Query: 343 SP---PTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
SP P PS P +P PS P PP S PPS
Sbjct: 183 SPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPS 216
Score = 63.9 bits (154), Expect = 1e-09
Identities = 41/88 (46%), Positives = 42/88 (47%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P S P S P + P R P PPPSP SPPP P RP P NPPSP
Sbjct: 161 PPSPPPSPPPSPPPSPPPSPPPSPPPR--PPPSPPPSPPP-SPPPSPPPRPPPSPNPPSP 217
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPP 432
PS P P P P PP S PP
Sbjct: 218 RPPS-PSPPSPRPPPRRPPFPPPSPPPP 244
Score = 63.5 bits (153), Expect = 2e-09
Identities = 38/87 (43%), Positives = 41/87 (46%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P SPPS P P P + P R PPP P SPPPP P P+PP PP P
Sbjct: 220 PSPSPPS-PRPPPRRPPFPPPSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPP--PPLP 276
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAP 429
P PS P P +P PS LP P P
Sbjct: 277 PPPSPP--PPSPPPPSPLPPSPRPPKP 301
Score = 63.5 bits (153), Expect = 2e-09
Identities = 38/89 (42%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPP-PSPTSHSPPPPHPRRPNPPSNPPS 345
P PP P S P S P + P R P PP P P S SPP P P PP PPS
Sbjct: 181 PPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPS 240
Query: 346 PPTPSAPLTP*APAAPSSLPAPPHSGAPP 432
PP P P P AP P P P PP
Sbjct: 241 PPPPRPP--PPAPPPPRPPPPSPPPPLPP 267
Score = 62.8 bits (151), Expect = 3e-09
Identities = 39/93 (41%), Positives = 42/93 (44%), Gaps = 5/93 (5%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPP----PSPTSHSPPPPHPRRPNPPSN 336
P PPS P S P S P + P R P PP PSP+ SP PP R P PP +
Sbjct: 185 PPRPPPSPPPSPPPS----PPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPFPPPS 240
Query: 337 PPSP-PTPSAPLTP*APAAPSSLPAPPHSGAPP 432
PP P P P AP P P P PP PP
Sbjct: 241 PPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPPP 273
Score = 62.0 bits (149), Expect = 5e-09
Identities = 34/91 (37%), Positives = 38/91 (41%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P SPP++P P + P P PPPSP PPPP P P PP PPSP
Sbjct: 299 PKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPSPNPPRPP--PPSP 356
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPPSSG 441
P P P P P P P P + G
Sbjct: 357 SPPKPPPPPSPPPRPPRRPPRPPRRPPTAPG 387
Score = 62.0 bits (149), Expect = 5e-09
Identities = 34/88 (38%), Positives = 39/88 (43%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS +P P NN R PPP P SP PP P P+PP P P
Sbjct: 284 PSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPP 343
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPP 432
P+P+ P P P +PS PP PP
Sbjct: 344 PSPNPPRPP--PPSPSPPKPPPPPSPPP 369
Score = 61.6 bits (148), Expect = 7e-09
Identities = 38/113 (33%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Frame = +1
Query: 181 PPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRP-------NPPSNP 339
PP P P+ P P S P PPP P +PPPP P P +PP +P
Sbjct: 101 PPPPPPPPPSPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSP 160
Query: 340 PSPPTPSAPLTP*APAAPSSLPAPPHSGAPPSSGSATTSAFATTRLSTPPTTN 498
P P PS P +P PS P+PP P S S + PP+ N
Sbjct: 161 PPSPPPSPPPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPN 213
Score = 61.2 bits (147), Expect = 9e-09
Identities = 38/90 (42%), Positives = 44/90 (48%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P S P S P + P P+PPPSP SPPP P P+PP PP
Sbjct: 157 PPSPPPSPPPSPPPSPPPSPPPSPPP--SPPPRPPPSPPP-SPPPSPP--PSPPPRPPPS 211
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPPSS 438
P P +P P +P+ PS P P PP S
Sbjct: 212 PNPPSPRPP-SPSPPSPRPPPRRPPFPPPS 240
Score = 61.2 bits (147), Expect = 9e-09
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPN-PPSNPPS 345
P PPS P P S P + P +P P P+P S PP P P P PP PP
Sbjct: 177 PPSPPPSPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPSPRPPPRRPPF 236
Query: 346 PPTPSAPLTP*APAAPSSLPAPPHSGAPP 432
PP P P PA P P PP S PP
Sbjct: 237 PPPSPPPPRPPPPAPPPPRPPPP-SPPPP 264
Score = 60.1 bits (144), Expect = 2e-08
Identities = 39/95 (41%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSP--PPPHPRRPNPPSNP 339
SP PP P P+ P P + P PPP P+ P PPP P PPS P
Sbjct: 110 SPPPPPPPPPPPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPPPSPPPSPPPSPP 169
Query: 340 PSP---PTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
PSP P PS P +P PS P+PP S PPS
Sbjct: 170 PSPPPSPPPSPPPSPPPRPPPSPPPSPPPS-PPPS 203
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/94 (40%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPP---PPHPRRPNPPSNP 339
P PPS P S P S P + P P PPPSP PP PP PR P+P
Sbjct: 169 PPSPPPSPPPSPPPSPPPRPPPSPPP--SPPPSPPPSPPPRPPPSPNPPSPRPPSPSPPS 226
Query: 340 PSPPTPSAPLTP*APAAP-SSLPAPPHSGAPPSS 438
P PP P P +P P PAPP PP S
Sbjct: 227 PRPPPRRPPFPPPSPPPPRPPPPAPPPPRPPPPS 260
Score = 59.3 bits (142), Expect = 4e-08
Identities = 32/91 (35%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSN--P 339
+P PP SP + P + P PPP P P PP P P PP P
Sbjct: 37 TPAAPPPGSPPPGTPPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPPPPPVP 96
Query: 340 PSPPTPSAPLTP*APAAPSSLPAPPHSGAPP 432
P PP P P P +P P P PP PP
Sbjct: 97 PPPPPPPPPPPPPSPPPPPPPPPPPPPSPPP 127
Score = 59.3 bits (142), Expect = 4e-08
Identities = 39/90 (43%), Positives = 45/90 (49%), Gaps = 1/90 (1%)
Frame = +1
Query: 166 SPFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQP-KPPPSPTSHSPPPPHPRRPNPPSNPP 342
SP SPP SP +P P + P+ S P PPPSP PP P P P PPS PP
Sbjct: 151 SPPPSPPPSPPPSP------PPSPPPSPPPSPPPSPPPSPPPRPPPSP-PPSP-PPSPPP 202
Query: 343 SPPTPSAPLTP*APAAPSSLPAPPHSGAPP 432
SPP P P +P P+ P+PP PP
Sbjct: 203 SPP-PRPPPSPNPPSPRPPSPSPPSPRPPP 231
Score = 59.3 bits (142), Expect = 4e-08
Identities = 29/70 (41%), Positives = 34/70 (48%)
Frame = +1
Query: 226 PHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSPPTPSAPLTP*APAAPSSLP 405
P + P + PPP+P+ PPP P P PP PP PP+PS P P P P P
Sbjct: 42 PPGSPPPGTPPPGVPPPTPSGPEHPPPPPPPPPPPPQPPLPPSPSPPPPP-PPPVPPPPP 100
Query: 406 APPHSGAPPS 435
PP PPS
Sbjct: 101 PPPPPPPPPS 110
Score = 58.9 bits (141), Expect = 5e-08
Identities = 38/87 (43%), Positives = 43/87 (48%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P P P P R PPP P SPPPP P P+PP PPSP
Sbjct: 234 PPFPPPSPPPPRPP-----PPAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPP--PPSP 286
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAP 429
P PS PL P +P P P+PP++ P
Sbjct: 287 PPPS-PLPP-SPRPPK--PSPPNNPFP 309
Score = 57.4 bits (137), Expect = 1e-07
Identities = 35/92 (38%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 166 SPFHSP-PSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPP 342
SP ++P P P NP P + NP R PPP P SP PP P P+P +PP
Sbjct: 302 SPPNNPFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPSPNPPRPPPPSP--SPP 359
Query: 343 SPPTPSAPLTP*APAAPSSLPAPPHSGAPPSS 438
PP P +P P P P PP PP++
Sbjct: 360 KPPPPPSP----PPRPPRRPPRPPR--RPPTA 385
Score = 57.0 bits (136), Expect = 2e-07
Identities = 34/88 (38%), Positives = 36/88 (40%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PPS P P P P PPPSP SP PP P PN P P P
Sbjct: 254 PRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPP 313
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPP 432
P P P P P +P+ PP S PP
Sbjct: 314 PNPPPPRPP--PPSPNPPRPPPPSPPPP 339
Score = 56.6 bits (135), Expect = 2e-07
Identities = 35/97 (36%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPR--RPNPPSNP- 339
P PP P +P P + P PPPSP SP PP PR +P+PP+NP
Sbjct: 249 PAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPF 308
Query: 340 -----PSPPTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
P+PP P P P P PP PPS
Sbjct: 309 PRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPPS 345
Score = 56.2 bits (134), Expect = 3e-07
Identities = 34/89 (38%), Positives = 36/89 (40%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PP P P P + P PPP P SPPPP P P+P P P
Sbjct: 239 PSPPPPRPPPPAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSPRP 298
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPPS 435
P PS P P P P P PP PPS
Sbjct: 299 PKPSPPNNP-FPRPPPPNPPPPRP-PPPS 325
Score = 55.8 bits (133), Expect = 4e-07
Identities = 35/93 (37%), Positives = 40/93 (42%), Gaps = 6/93 (6%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKP-PPSPTSHSPPPPH-----PRRPNPP 330
P PPS P P P + P S P P PPSP P PP+ P PNPP
Sbjct: 264 PLPPPPSPPPPLP------PPPSPPPPSPPPPSPLPPSPRPPKPSPPNNPFPRPPPPNPP 317
Query: 331 SNPPSPPTPSAPLTP*APAAPSSLPAPPHSGAP 429
P PP+P+ P P P+ P P PP P
Sbjct: 318 PPRPPPPSPNPPRPP-PPSPPPPRPPPPSPNPP 349
Score = 53.5 bits (127), Expect = 2e-06
Identities = 32/88 (36%), Positives = 35/88 (39%)
Frame = +1
Query: 169 PFHSPPSSPSSNPNSHHLLPHNNNPTRSKSQPKPPPSPTSHSPPPPHPRRPNPPSNPPSP 348
P PP+ P P P P PPPSP SPPPP P P+P PP P
Sbjct: 244 PRPPPPAPPPPRPPPPSPPPPLPPPPSPPPPLPPPPSPPPPSPPPPSPLPPSP--RPPKP 301
Query: 349 PTPSAPLTP*APAAPSSLPAPPHSGAPP 432
P+ P P P PP S PP
Sbjct: 302 SPPNNPFPRPPPPNPPPPRPPPPSPNPP 329
Score = 43.9 bits (102), Expect = 0.002
Identities = 29/65 (44%), Positives = 30/65 (45%), Gaps = 8/65 (12%)
Frame = +1
Query: 265 KPPP--SP------TSHSPPPPHPRRPNPPSNPPSPPTPSAPLTP*APAAPSSLPAPPHS 420
KPPP SP T +PPP P PP P PPTPS P P P P P PP
Sbjct: 23 KPPPRRSPVVALVETPAAPPPGSPPPGTPPPGVP-PPTPSGPEHP--PPPPPPPPPPPQP 79
Query: 421 GAPPS 435
PPS
Sbjct: 80 PLPPS 84
Score = 36.6 bits (83), Expect = 0.25
Identities = 32/97 (32%), Positives = 35/97 (35%), Gaps = 1/97 (1%)
Frame = +2
Query: 170 PFTLHHPPLRPTQIPIIFFPTTTTQQGQSPNPSLHPHPPLTLHHHLTLAAQILLQIHPLR 349
PF PP P P P SP P P P +P R
Sbjct: 307 PFPRPPPPNPPPPRPPPPSPNPPRPPPPSPPPPRPPPP----------------SPNPPR 350
Query: 350 QPPPRPSLLRPPPPPRAFQRR-RTPARLHRLVPQRPP 457
PPP PS +PPPPP R R P R P+RPP
Sbjct: 351 PPPPSPSPPKPPPPPSPPPRPPRRPPRP----PRRPP 383
Score = 33.9 bits (76), Expect = 1.6
Identities = 27/93 (29%), Positives = 33/93 (35%)
Frame = +2
Query: 188 PPLRPTQIPIIFFPTTTTQQGQSPNPSLHPHPPLTLHHHLTLAAQILLQIHPLRQPPPRP 367
PP P P P+ + SP PS P PP + P +PPP P
Sbjct: 169 PPSPPPSPPPSPPPSPPPRPPPSPPPSPPPSPPPS----------------PPPRPPPSP 212
Query: 368 SLLRPPPPPRAFQRRRTPARLHRLVPQRPPRSR 466
+ P PP + R P R P PP R
Sbjct: 213 NPPSPRPPSPSPPSPRPPPRRPPFPPPSPPPPR 245
Score = 33.5 bits (75), Expect = 2.1
Identities = 34/116 (29%), Positives = 36/116 (30%)
Frame = +3
Query: 57 PKMESNSQVPPPSSEKDNNVDQKPLPSEPSPFAVASLSLSLSTILPFVQPKFPSSSSPQQ 236
P S PPP N P P PSP S P P P S P
Sbjct: 120 PPPPSPPPPPPPPPPPPPNPPPPPPPPPPSPSPPPSPP-------PSPPPSPPPSPPPSP 172
Query: 237 QPNKVKVPTQASTLTHLSLSTTTSPSPPKSSFKSTLSANPLRAPHSLGPRRPLEPS 404
P+ P S PSPP S S + P R P S P P PS
Sbjct: 173 PPSPPPSPPP-------SPPPRPPPSPPPSPPPSPPPSPPPRPPPSPNPPSPRPPS 221
Score = 33.1 bits (74), Expect = 2.7
Identities = 31/118 (26%), Positives = 41/118 (34%)
Frame = +3
Query: 57 PKMESNSQVPPPSSEKDNNVDQKPLPSEPSPFAVASLSLSLSTILPFVQPKFPSSSSPQQ 236
P + PPPS + + P P +PSP P +P PS + P+
Sbjct: 273 PPLPPPPSPPPPSPPPPSPLPPSPRPPKPSP-PNNPFPRPPPPNPPPPRPPPPSPNPPRP 331
Query: 237 QPNKVKVPTQASTLTHLSLSTTTSPSPPKSSFKSTLSANPLRAPHSLGPRRPLEPSSA 410
P P + SPSPPK + P R P PR P P +A
Sbjct: 332 PPPSPPPPRPPPPSPNPPRPPPPSPSPPKPPPPPSPPPRPPRRP----PRPPRRPPTA 385
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.315 0.129 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 681,255,261
Number of Sequences: 1393205
Number of extensions: 22597401
Number of successful extensions: 663412
Number of sequences better than 10.0: 17063
Number of HSP's better than 10.0 without gapping: 138590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355348
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
