Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013159A_C01 KMC013159A_c01
(709 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T13458 hypothetical protein T19F6.90 - Arabidopsis thaliana... 356 2e-97
ref|NP_194141.2| putative protein; protein id: At4g24100.1, supp... 356 2e-97
gb|AAB63615.1| Ser/Thr protein kinase isolog [Arabidopsis thaliana] 356 2e-97
ref|NP_192811.1| putative protein kinase; protein id: At4g10730.... 355 4e-97
gb|AAL54869.1|AC092696_2 putative Ste-20 related kinase, 3'-part... 353 1e-96
>pir||T13458 hypothetical protein T19F6.90 - Arabidopsis thaliana
gi|5668638|emb|CAB51653.1| putative protein [Arabidopsis
thaliana] gi|7269259|emb|CAB81328.1| putative protein
[Arabidopsis thaliana]
Length = 710
Score = 356 bits (913), Expect = 2e-97
Identities = 168/224 (75%), Positives = 193/224 (86%), Gaps = 4/224 (1%)
Frame = +2
Query: 50 GSGT----RTYSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLED 217
GSG+ R +S+N DY L+EE+G+GASA VYRA++LP +E VA+KC+DLDRCN+NL+D
Sbjct: 16 GSGSSKQQRGFSMNPKDYKLMEEIGHGASAVVYRAIYLPTNEVVAIKCLDLDRCNSNLDD 75
Query: 218 IRREAQTMSLIDHRNVVRAHWSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGS 397
IRRE+QTMSLIDH NV+++ SF VD LWVVMPFMAQGSCLHLMK AY DGFEE AI
Sbjct: 76 IRRESQTMSLIDHPNVIKSFCSFSVDHSLWVVMPFMAQGSCLHLMKTAYSDGFEESAICC 135
Query: 398 ILKETLKALEYLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFV 577
+LKETLKAL+YLHR GHIHRDVKAGNILL +G++KL DFGVSA +FD G+RQR RNTFV
Sbjct: 136 VLKETLKALDYLHRQGHIHRDVKAGNILLDDNGEIKLGDFGVSACLFDNGDRQRARNTFV 195
Query: 578 GTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYP 709
GTPCWMAPEVLQPG GYN KAD+WSFGITALELAHGHAPFSKYP
Sbjct: 196 GTPCWMAPEVLQPGNGYNSKADIWSFGITALELAHGHAPFSKYP 239
>ref|NP_194141.2| putative protein; protein id: At4g24100.1, supported by cDNA:
gi_20268685 [Arabidopsis thaliana]
gi|20268686|gb|AAM14047.1| unknown protein [Arabidopsis
thaliana] gi|22136716|gb|AAM91677.1| unknown protein
[Arabidopsis thaliana]
Length = 709
Score = 356 bits (913), Expect = 2e-97
Identities = 168/224 (75%), Positives = 193/224 (86%), Gaps = 4/224 (1%)
Frame = +2
Query: 50 GSGT----RTYSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLED 217
GSG+ R +S+N DY L+EE+G+GASA VYRA++LP +E VA+KC+DLDRCN+NL+D
Sbjct: 16 GSGSSKQQRGFSMNPKDYKLMEEIGHGASAVVYRAIYLPTNEVVAIKCLDLDRCNSNLDD 75
Query: 218 IRREAQTMSLIDHRNVVRAHWSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGS 397
IRRE+QTMSLIDH NV+++ SF VD LWVVMPFMAQGSCLHLMK AY DGFEE AI
Sbjct: 76 IRRESQTMSLIDHPNVIKSFCSFSVDHSLWVVMPFMAQGSCLHLMKTAYSDGFEESAICC 135
Query: 398 ILKETLKALEYLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFV 577
+LKETLKAL+YLHR GHIHRDVKAGNILL +G++KL DFGVSA +FD G+RQR RNTFV
Sbjct: 136 VLKETLKALDYLHRQGHIHRDVKAGNILLDDNGEIKLGDFGVSACLFDNGDRQRARNTFV 195
Query: 578 GTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYP 709
GTPCWMAPEVLQPG GYN KAD+WSFGITALELAHGHAPFSKYP
Sbjct: 196 GTPCWMAPEVLQPGNGYNSKADIWSFGITALELAHGHAPFSKYP 239
>gb|AAB63615.1| Ser/Thr protein kinase isolog [Arabidopsis thaliana]
Length = 572
Score = 356 bits (913), Expect = 2e-97
Identities = 168/224 (75%), Positives = 193/224 (86%), Gaps = 4/224 (1%)
Frame = +2
Query: 50 GSGT----RTYSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLED 217
GSG+ R +S+N DY L+EE+G+GASA VYRA++LP +E VA+KC+DLDRCN+NL+D
Sbjct: 16 GSGSSKQQRGFSMNPKDYKLMEEIGHGASAVVYRAIYLPTNEVVAIKCLDLDRCNSNLDD 75
Query: 218 IRREAQTMSLIDHRNVVRAHWSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGS 397
IRRE+QTMSLIDH NV+++ SF VD LWVVMPFMAQGSCLHLMK AY DGFEE AI
Sbjct: 76 IRRESQTMSLIDHPNVIKSFCSFSVDHSLWVVMPFMAQGSCLHLMKTAYSDGFEESAICC 135
Query: 398 ILKETLKALEYLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFV 577
+LKETLKAL+YLHR GHIHRDVKAGNILL +G++KL DFGVSA +FD G+RQR RNTFV
Sbjct: 136 VLKETLKALDYLHRQGHIHRDVKAGNILLDDNGEIKLGDFGVSACLFDNGDRQRARNTFV 195
Query: 578 GTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYP 709
GTPCWMAPEVLQPG GYN KAD+WSFGITALELAHGHAPFSKYP
Sbjct: 196 GTPCWMAPEVLQPGNGYNSKADIWSFGITALELAHGHAPFSKYP 239
>ref|NP_192811.1| putative protein kinase; protein id: At4g10730.1 [Arabidopsis
thaliana] gi|25407517|pir||B85112 hypothetical protein
AT4g10730 [imported] - Arabidopsis thaliana
gi|7267771|emb|CAB81174.1| putative protein kinase
[Arabidopsis thaliana]
Length = 693
Score = 355 bits (910), Expect = 4e-97
Identities = 166/214 (77%), Positives = 189/214 (87%)
Frame = +2
Query: 68 YSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLEDIRREAQTMSL 247
+S+N DY L+EEVGYGASA V+RA++LP +E VA+K +DLDRCN+NL+DIRREAQTM+L
Sbjct: 20 FSVNPKDYKLMEEVGYGASAVVHRAIYLPTNEVVAIKSLDLDRCNSNLDDIRREAQTMTL 79
Query: 248 IDHRNVVRAHWSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGSILKETLKALE 427
IDH NV+++ SF VD LWVVMPFMAQGSCLHLMK AYPDGFEE AI S+LKETLKAL+
Sbjct: 80 IDHPNVIKSFCSFAVDHHLWVVMPFMAQGSCLHLMKAAYPDGFEEAAICSMLKETLKALD 139
Query: 428 YLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFVGTPCWMAPEV 607
YLHR GHIHRDVKAGNILL G++KL DFGVSA +FD G+RQR RNTFVGTPCWMAPEV
Sbjct: 140 YLHRQGHIHRDVKAGNILLDDTGEIKLGDFGVSACLFDNGDRQRARNTFVGTPCWMAPEV 199
Query: 608 LQPGTGYNFKADVWSFGITALELAHGHAPFSKYP 709
LQPG+GYN KAD+WSFGITALELAHGHAPFSKYP
Sbjct: 200 LQPGSGYNSKADIWSFGITALELAHGHAPFSKYP 233
>gb|AAL54869.1|AC092696_2 putative Ste-20 related kinase, 3'-partial [Oryza sativa]
Length = 541
Score = 353 bits (907), Expect = 1e-96
Identities = 166/224 (74%), Positives = 192/224 (85%)
Frame = +2
Query: 38 RSTMGSGTRTYSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLED 217
R++ ++ N DY L+EEVGYGA A VYRA+F+PR++ VAVKC+DLD+ N N+++
Sbjct: 9 RTSSSGAAAAFTANPRDYQLMEEVGYGAHAVVYRALFVPRNDVVAVKCLDLDQLNNNIDE 68
Query: 218 IRREAQTMSLIDHRNVVRAHWSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGS 397
I+REAQ MSLI+H NV+RA+ SFVV+ LWVVMPFM +GSCLHLMK+AYPDGFEE IGS
Sbjct: 69 IQREAQIMSLIEHPNVIRAYCSFVVEHSLWVVMPFMTEGSCLHLMKIAYPDGFEEPVIGS 128
Query: 398 ILKETLKALEYLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFV 577
ILKETLKALEYLHR G IHRDVKAGNIL+ + G VKL DFGVSA MFD G+RQR+RNTFV
Sbjct: 129 ILKETLKALEYLHRQGQIHRDVKAGNILVDNAGIVKLGDFGVSACMFDRGDRQRSRNTFV 188
Query: 578 GTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYP 709
GTPCWMAPEVLQPGTGYNFKAD+WSFGITALELAHGHAPFSKYP
Sbjct: 189 GTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYP 232
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 693,233,512
Number of Sequences: 1393205
Number of extensions: 17486058
Number of successful extensions: 105859
Number of sequences better than 10.0: 11964
Number of HSP's better than 10.0 without gapping: 76133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89148
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32373034405
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
