Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013134A_C01 KMC013134A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200975.1| putative protein; protein id: At5g61670.1, supp... 248 3e-65
dbj|BAA98202.1| gene_id:K16F4.10~pir||T00468~similar to unknown ... 201 6e-51
ref|NP_196231.2| putative protein; protein id: At5g06130.1, supp... 201 6e-51
ref|NP_177698.1| unknown protein; protein id: At1g75690.1 [Arabi... 43 0.002
ref|NP_181032.1| unknown protein; protein id: At2g34860.1, suppo... 42 0.003
>ref|NP_200975.1| putative protein; protein id: At5g61670.1, supported by cDNA:
112078., supported by cDNA: gi_20453123 [Arabidopsis
thaliana] gi|9758482|dbj|BAB09011.1|
gene_id:K11J9.20~unknown protein [Arabidopsis thaliana]
gi|17529230|gb|AAL38842.1| unknown protein [Arabidopsis
thaliana] gi|20453124|gb|AAM19804.1| AT5g61670/k11j9_190
[Arabidopsis thaliana] gi|21436109|gb|AAM51301.1|
unknown protein [Arabidopsis thaliana]
gi|21536802|gb|AAM61134.1| unknown [Arabidopsis
thaliana] gi|23506191|gb|AAN31107.1| At5g61670/k11j9_190
[Arabidopsis thaliana]
Length = 307
Score = 248 bits (633), Expect = 3e-65
Identities = 117/130 (90%), Positives = 124/130 (95%)
Frame = -1
Query: 530 TSYADFIQNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEQKRCKYCLGTG 351
TSYADFIQ++HLPMQLS+VDPIVASFSGGAVGVISALMVVE+NNVKQQE KRCKYCLGTG
Sbjct: 178 TSYADFIQSLHLPMQLSQVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTG 237
Query: 350 YLACARCSSTGALVLIEPVSTVNGGDLPLSPPKTERCSNCSGSGKVMCPTCLCTGMAMAS 171
YLACARCSSTGALVL EPVS + GG+ LSPPKTERCSNCSG+GKVMCPTCLCTGMAMAS
Sbjct: 238 YLACARCSSTGALVLTEPVSAIAGGNHSLSPPKTERCSNCSGAGKVMCPTCLCTGMAMAS 297
Query: 170 EHDPRIDPFD 141
EHDPRIDPFD
Sbjct: 298 EHDPRIDPFD 307
>dbj|BAA98202.1| gene_id:K16F4.10~pir||T00468~similar to unknown protein
[Arabidopsis thaliana]
Length = 319
Score = 201 bits (510), Expect = 6e-51
Identities = 90/130 (69%), Positives = 109/130 (83%)
Frame = -1
Query: 530 TSYADFIQNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEQKRCKYCLGTG 351
TSY DFI+++HLP+QLS+VDPIVASFSGGAVGVIS LM++E+NNVKQQE+KRCKYCLGTG
Sbjct: 190 TSYEDFIRSLHLPLQLSQVDPIVASFSGGAVGVISTLMLIEVNNVKQQEKKRCKYCLGTG 249
Query: 350 YLACARCSSTGALVLIEPVSTVNGGDLPLSPPKTERCSNCSGSGKVMCPTCLCTGMAMAS 171
YL CARCS++G + I+P++ + + T+RC NCSG+GKVMCPTCLCTGM AS
Sbjct: 250 YLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMCPTCLCTGMVTAS 309
Query: 170 EHDPRIDPFD 141
EHDPR DPFD
Sbjct: 310 EHDPRFDPFD 319
>ref|NP_196231.2| putative protein; protein id: At5g06130.1, supported by cDNA:
gi_18176019 [Arabidopsis thaliana]
gi|18176020|gb|AAL59969.1| unknown protein [Arabidopsis
thaliana] gi|22136730|gb|AAM91684.1| unknown protein
[Arabidopsis thaliana]
Length = 315
Score = 201 bits (510), Expect = 6e-51
Identities = 90/130 (69%), Positives = 109/130 (83%)
Frame = -1
Query: 530 TSYADFIQNMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEQKRCKYCLGTG 351
TSY DFI+++HLP+QLS+VDPIVASFSGGAVGVIS LM++E+NNVKQQE+KRCKYCLGTG
Sbjct: 186 TSYEDFIRSLHLPLQLSQVDPIVASFSGGAVGVISTLMLIEVNNVKQQEKKRCKYCLGTG 245
Query: 350 YLACARCSSTGALVLIEPVSTVNGGDLPLSPPKTERCSNCSGSGKVMCPTCLCTGMAMAS 171
YL CARCS++G + I+P++ + + T+RC NCSG+GKVMCPTCLCTGM AS
Sbjct: 246 YLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMCPTCLCTGMVTAS 305
Query: 170 EHDPRIDPFD 141
EHDPR DPFD
Sbjct: 306 EHDPRFDPFD 315
>ref|NP_177698.1| unknown protein; protein id: At1g75690.1 [Arabidopsis thaliana]
gi|26450801|dbj|BAC42509.1| unknown protein [Arabidopsis
thaliana] gi|27311545|gb|AAO00738.1| unknown protein
[Arabidopsis thaliana]
Length = 154
Score = 43.1 bits (100), Expect = 0.002
Identities = 32/111 (28%), Positives = 50/111 (44%), Gaps = 7/111 (6%)
Frame = -1
Query: 494 PMQLSEVDP-IVASFSGGAVGV-----ISALMVVEINNVKQQEQKR-CKYCLGTGYLACA 336
P +E+DP V + S G V I +I+N ++E + C C GTG C
Sbjct: 40 PRIKAELDPNTVVAISVGVASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCR 99
Query: 335 RCSSTGALVLIEPVSTVNGGDLPLSPPKTERCSNCSGSGKVMCPTCLCTGM 183
C +G + + + GG+ +S C NC G+G + C TC +G+
Sbjct: 100 LCVGSGNVTV-----ELGGGEKEVS-----NCINCDGAGSLTCTTCQGSGV 140
>ref|NP_181032.1| unknown protein; protein id: At2g34860.1, supported by cDNA:
gi_20466395 [Arabidopsis thaliana]
gi|7485815|pir||T00468 hypothetical protein At2g34860
[imported] - Arabidopsis thaliana
gi|3033382|gb|AAC12826.1| unknown protein [Arabidopsis
thaliana] gi|20466396|gb|AAM20515.1| unknown protein
[Arabidopsis thaliana] gi|22136346|gb|AAM91251.1|
unknown protein [Arabidopsis thaliana]
Length = 186
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1
Query: 374 CKYCLGTGYLACARCSSTGALVLIEPVSTVNGGDLPLSPPKTERCSNCSGSGKVMCPTCL 195
C+ C G+G + C C TG + + + C NC G GK++CP CL
Sbjct: 102 CRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFT-------ECPNCYGRGKLVCPVCL 154
Query: 194 CTGM 183
TG+
Sbjct: 155 GTGL 158
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,290,143
Number of Sequences: 1393205
Number of extensions: 10707699
Number of successful extensions: 31602
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 29701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31438
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
