>KMC013093A_C01 KMC013093A_c01
tagatttaatataatataatagattatacatcgcctcccaaaattccaaatcagttttca
gcaaactataacagcatgtaGGGAATTAGGAGGCCATATTCCTGGAATTTGTAGGAAGAA
GAGTCAATCACTATGTTCAGCTATTATATGCATGCTATTAAACAAAACCAATGACTATAT
TAACTTAATTCACATTGCCGTCTAGGAAACCAAATACATAATTTTACCAACTGTCTAAGC
TAGAAAGCCTCAAAAAAACAATGATAAAACAGGAAGCTTTTGCCCAGACGAGAAAAGAAA
CATTAATCTAGATGGGAGCTGCACATGTGGTCCTAAAGTGACCTGTTTGATTGCAACGAC
TACAATGCACCACCCTCTTCACACGTCCACGGTCTTCGGCGCGAACTCGCTTTTTTCTAG
GCCTTCCAGGTGGCCTGAGTGATTTGGGTGGGTTGATAAGAACTTGATCAGCTTTGGCCG
CATTTTCATCCCCCTCAGACAACTCCTTCCACAAAGACTTATCAGGAATTGGATGTATGG
TTTGTGAGTATGTCTTGCGATAAGTGGCAACAGTGAAACAGCTTTCTG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC013093A_C01 KMC013093A_c01
         (588 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187111.1| Mutator-like transposase; protein id: At3g04605...   172  2e-42
ref|NP_180622.1| putative Mutator-like transposase; protein id: ...   127  8e-29
ref|NP_172159.1| mudrA-like protein; protein id: At1g06740.1 [Ar...   111  8e-24
ref|NP_568331.1| Expressed protein; protein id: At5g16505.1, sup...   103  2e-21
dbj|BAB91824.1| putative mutator-like transposase [Oryza sativa ...    81  9e-15

>ref|NP_187111.1| Mutator-like transposase; protein id: At3g04605.1, supported by
           cDNA: gi_18389285, supported by cDNA: gi_20465952
           [Arabidopsis thaliana]
           gi|6175165|gb|AAF04891.1|AC011437_6 Mutator-like
           transposase [Arabidopsis thaliana]
           gi|18389286|gb|AAL67086.1| putative Mutator transposase
           [Arabidopsis thaliana] gi|20465953|gb|AAM20162.1|
           putative mutator transposase [Arabidopsis thaliana]
          Length = 757

 Score =  172 bits (437), Expect = 2e-42
 Identities = 82/93 (88%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
 Frame = -3

Query: 586 ESCFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKAD-QVLINPPKSLRPPGRPRKK 410
           ESCFTVATYRKTYSQTIHPIPDKS W+ELSEGD N  KA    +INPPKSLRPPGRPRK+
Sbjct: 665 ESCFTVATYRKTYSQTIHPIPDKSHWRELSEGDPNVNKAALDAIINPPKSLRPPGRPRKR 724

Query: 409 RVRAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI 311
           RVRAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI
Sbjct: 725 RVRAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI 757

>ref|NP_180622.1| putative Mutator-like transposase; protein id: At2g30640.1
           [Arabidopsis thaliana] gi|25408094|pir||H84710
           Mutator-like transposase [imported] - Arabidopsis
           thaliana gi|2880040|gb|AAC02734.1| putative Mutator-like
           transposase [Arabidopsis thaliana]
           gi|20198324|gb|AAM15523.1| putative Mutator-like
           transposase [Arabidopsis thaliana]
          Length = 754

 Score =  127 bits (320), Expect = 8e-29
 Identities = 55/92 (59%), Positives = 69/92 (74%)
 Frame = -3

Query: 586 ESCFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINPPKSLRPPGRPRKKR 407
           ES FTVA YR+TY++TIHP+PDK+ WK      E+    ++++I PP+ LR P RP+K+R
Sbjct: 663 ESYFTVANYRRTYAETIHPVPDKTEWKTTEPAGESGEDGEEIVIRPPRDLRQPPRPKKRR 722

Query: 406 VRAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI 311
            + EDRGR KRVV CSRCNQ GHFRTTC API
Sbjct: 723 SQGEDRGRQKRVVRCSRCNQAGHFRTTCTAPI 754

>ref|NP_172159.1| mudrA-like protein; protein id: At1g06740.1 [Arabidopsis thaliana]
           gi|25406932|pir||B86202 hypothetical protein [imported]
           - Arabidopsis thaliana
           gi|7523705|gb|AAF63144.1|AC011001_14 Similar to maize
           transposon mudrA protein [Arabidopsis thaliana]
          Length = 726

 Score =  111 bits (277), Expect = 8e-24
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = -3

Query: 586 ESCFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINPPKSLRPPGRPRKKR 407
           ESCFTV  YR+ Y++T+ PI DK  WKE      ++ +  + +I  PK+++  G PRK+R
Sbjct: 642 ESCFTVENYRRAYAETLEPISDKVQWKE-----NDSERDSENVIKTPKAMK--GAPRKRR 694

Query: 406 VRAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI 311
           VRAEDR RV+RVVHC RCNQTGHFRTTC AP+
Sbjct: 695 VRAEDRDRVRRVVHCGRCNQTGHFRTTCTAPM 726

>ref|NP_568331.1| Expressed protein; protein id: At5g16505.1, supported by cDNA:
           gi_16648944, supported by cDNA: gi_20259875 [Arabidopsis
           thaliana] gi|9759134|dbj|BAB09619.1| mutator-like
           transposase-like protein [Arabidopsis thaliana]
           gi|16648945|gb|AAL24324.1| mutator-like transposase-like
           protein [Arabidopsis thaliana]
           gi|20259876|gb|AAM13285.1| mutator-like transposase-like
           protein [Arabidopsis thaliana]
          Length = 597

 Score =  103 bits (257), Expect = 2e-21
 Identities = 48/92 (52%), Positives = 63/92 (68%)
 Frame = -3

Query: 586 ESCFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINPPKSLRPPGRPRKKR 407
           E CFTV++Y++TYSQ I  IPD+SLWK+  EG+E     + + I PPK+ RPPGRP+KK 
Sbjct: 508 EPCFTVSSYQQTYSQMIGEIPDRSLWKD--EGEEAGGGVESLRIRPPKTRRPPGRPKKKV 565

Query: 406 VRAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI 311
           VR E+  R KR+V C RC+  GH +  C  PI
Sbjct: 566 VRVENLKRPKRIVQCGRCHLLGHSQKKCTQPI 597

>dbj|BAB91824.1| putative mutator-like transposase [Oryza sativa (japonica
           cultivar-group)] gi|20804630|dbj|BAB92320.1| putative
           Mutator-like transposase [Oryza sativa (japonica
           cultivar-group)]
          Length = 609

 Score = 81.3 bits (199), Expect = 9e-15
 Identities = 36/87 (41%), Positives = 51/87 (58%)
 Frame = -3

Query: 580 CFTVATYRKTYSQTIHPIPDKSLWKELSEGDENAAKADQVLINPPKSLRPPGRPRKKRVR 401
           CF++  YR+TYSQ I+ IPD+S W       + A      ++ PPK  RPPGRP+ K ++
Sbjct: 520 CFSIMKYRETYSQPIYSIPDRSQWNLPFSFAQGAGSKAYAVLRPPKIRRPPGRPKMKILK 579

Query: 400 AEDRGRVKRVVHCSRCNQTGHFRTTCA 320
            E   R KR+V C RC+  GH +  C+
Sbjct: 580 IESLKRPKRIVQCGRCHLLGHSQKKCS 606

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,797,948
Number of Sequences: 1393205
Number of extensions: 10839314
Number of successful extensions: 29533
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 28180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29450
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPDL016h06_f AV777326 1 539 2 MFBL003b01_f BP041403 173 588

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