Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013048A_C01 KMC013048A_c01
(613 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T10633 hypothetical protein T13K14.70 - Arabidopsis thalian... 91 2e-17
gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana] 91 2e-17
gb|AAC97105.1| unknown [Arabidopsis thaliana] 91 2e-17
ref|NP_567616.1| putative protein; protein id: At4g20910.1, supp... 91 2e-17
dbj|BAC20777.1| putative HEN1 [Oryza sativa (japonica cultivar-g... 89 5e-17
>pir||T10633 hypothetical protein T13K14.70 - Arabidopsis thaliana
gi|5262781|emb|CAB45886.1| putative protein [Arabidopsis
thaliana] gi|7268887|emb|CAB79091.1| putative protein
[Arabidopsis thaliana]
Length = 957
Score = 90.5 bits (223), Expect = 2e-17
Identities = 41/72 (56%), Positives = 52/72 (71%)
Frame = -1
Query: 613 KFEWTRDQFEQWXSDLAARHNYSVEFSGXXXSADVEPGFASQIAVFKRDWKLEDDILKQA 434
KFEWTR+QF QW S L RHNYSVEFSG S +VEPGFASQIA+F+R+ +++ +
Sbjct: 876 KFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRREASSVENVAE-- 933
Query: 433 DTERHYNVIWEW 398
+ + Y VIWEW
Sbjct: 934 SSMQPYKVIWEW 945
>gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana]
Length = 942
Score = 90.5 bits (223), Expect = 2e-17
Identities = 41/72 (56%), Positives = 52/72 (71%)
Frame = -1
Query: 613 KFEWTRDQFEQWXSDLAARHNYSVEFSGXXXSADVEPGFASQIAVFKRDWKLEDDILKQA 434
KFEWTR+QF QW S L RHNYSVEFSG S +VEPGFASQIA+F+R+ +++ +
Sbjct: 861 KFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRREASSVENVAE-- 918
Query: 433 DTERHYNVIWEW 398
+ + Y VIWEW
Sbjct: 919 SSMQPYKVIWEW 930
>gb|AAC97105.1| unknown [Arabidopsis thaliana]
Length = 942
Score = 90.5 bits (223), Expect = 2e-17
Identities = 41/72 (56%), Positives = 52/72 (71%)
Frame = -1
Query: 613 KFEWTRDQFEQWXSDLAARHNYSVEFSGXXXSADVEPGFASQIAVFKRDWKLEDDILKQA 434
KFEWTR+QF QW S L RHNYSVEFSG S +VEPGFASQIA+F+R+ +++ +
Sbjct: 861 KFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRREASSVENVAE-- 918
Query: 433 DTERHYNVIWEW 398
+ + Y VIWEW
Sbjct: 919 SSMQPYKVIWEW 930
>ref|NP_567616.1| putative protein; protein id: At4g20910.1, supported by cDNA:
gi_13241745, supported by cDNA: gi_15638614 [Arabidopsis
thaliana] gi|13241746|gb|AAK16435.1|AF327068_1 CORYMBOSA2
[Arabidopsis thaliana]
Length = 942
Score = 90.5 bits (223), Expect = 2e-17
Identities = 41/72 (56%), Positives = 52/72 (71%)
Frame = -1
Query: 613 KFEWTRDQFEQWXSDLAARHNYSVEFSGXXXSADVEPGFASQIAVFKRDWKLEDDILKQA 434
KFEWTR+QF QW S L RHNYSVEFSG S +VEPGFASQIA+F+R+ +++ +
Sbjct: 861 KFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRREASSVENVAE-- 918
Query: 433 DTERHYNVIWEW 398
+ + Y VIWEW
Sbjct: 919 SSMQPYKVIWEW 930
>dbj|BAC20777.1| putative HEN1 [Oryza sativa (japonica cultivar-group)]
Length = 929
Score = 89.0 bits (219), Expect = 5e-17
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = -1
Query: 613 KFEWTRDQFEQWXSDLAARHNYSVEFSGXXXSADVEPGFASQIAVFKRDWKLEDDILKQA 434
KFEWTR QF+ W + LA +HNYSVEFSG S D EPGFASQIAVF+R +D++ ++
Sbjct: 851 KFEWTRSQFQHWATGLAEKHNYSVEFSGVGGSGD-EPGFASQIAVFRRMASGQDEVCQEG 909
Query: 433 DTERHYNVIWEW 398
+ + Y ++WEW
Sbjct: 910 ELHQPYELLWEW 921
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 505,203,537
Number of Sequences: 1393205
Number of extensions: 10340868
Number of successful extensions: 21295
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21284
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
