Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013017A_C01 KMC013017A_c01
(628 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680181.1| similar to metal-transporting P-type ATPase; pr... 223 2e-57
gb|AAO13462.1| Unknown protein [Oryza sativa (japonica cultivar-... 171 6e-42
ref|NP_487822.1| cation-transporting P-type ATPase [Nostoc sp. P... 135 6e-31
ref|ZP_00072999.1| hypothetical protein [Trichodesmium erythraeu... 134 7e-31
emb|CAA20565.1| metal-transporting P-type ATPase (fragment) [Ara... 132 5e-30
>ref|NP_680181.1| similar to metal-transporting P-type ATPase; protein id: At5g21930.1
[Arabidopsis thaliana] gi|13374852|emb|CAC34486.1|
metal-transporting ATPase-like protein [Arabidopsis
thaliana] gi|29294054|gb|AAO73891.1| ATPase, E1-E2 type
family [Arabidopsis thaliana]
Length = 856
Score = 223 bits (567), Expect = 2e-57
Identities = 112/144 (77%), Positives = 135/144 (92%)
Frame = -1
Query: 613 SLAPQQKSEFISSLKAAGHHVAMVGDGINDAPALAVADVGIALQNEAQENAASDAASIIL 434
SL+P++K EFIS+L+++GH VAMVGDGINDAP+LA ADVGIAL+ EAQENAAS+AAS+IL
Sbjct: 710 SLSPEKKFEFISNLQSSGHRVAMVGDGINDAPSLAQADVGIALKIEAQENAASNAASVIL 769
Query: 433 LGNKISQVVDAIDLAQSTMAKVYQNLSWAVAYNVIAIPIAAGVLLPHFDFAMTPSLSGGM 254
+ NK+S VVDA+ LAQ+TM+KVYQNL+WA+AYNVI+IPIAAGVLLP +DFAMTPSLSGG+
Sbjct: 770 VRNKLSHVVDALSLAQATMSKVYQNLAWAIAYNVISIPIAAGVLLPQYDFAMTPSLSGGL 829
Query: 253 MALSSIFVVSNSLLLQLHGSQTSR 182
MALSSIFVVSNSLLLQLH S+TS+
Sbjct: 830 MALSSIFVVSNSLLLQLHKSETSK 853
>gb|AAO13462.1| Unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 910
Score = 171 bits (434), Expect = 6e-42
Identities = 80/120 (66%), Positives = 107/120 (88%)
Frame = -1
Query: 622 VKASLAPQQKSEFISSLKAAGHHVAMVGDGINDAPALAVADVGIALQNEAQENAASDAAS 443
+K+SL P +K+ I++L+ G VAMVGDGINDAP+LA ADVG+A++ ++E+AASDAAS
Sbjct: 758 IKSSLTPHEKAGIITALQGEGRRVAMVGDGINDAPSLAAADVGVAMRTNSKESAASDAAS 817
Query: 442 IILLGNKISQVVDAIDLAQSTMAKVYQNLSWAVAYNVIAIPIAAGVLLPHFDFAMTPSLS 263
++LLGN++SQV+DA+ L+++TMAKV+QNL+WAVAYN++AIPIAAGVLLP FDFAMTPSLS
Sbjct: 818 VVLLGNRLSQVMDALSLSKATMAKVHQNLAWAVAYNIVAIPIAAGVLLPQFDFAMTPSLS 877
>ref|NP_487822.1| cation-transporting P-type ATPase [Nostoc sp. PCC 7120]
gi|25533946|pir||AG2278 cation-transporting P-type ATPase
all3782 [imported] - Nostoc sp. (strain PCC 7120)
gi|17132916|dbj|BAB75481.1| cation-transporting P-type
ATPase [Nostoc sp. PCC 7120]
Length = 815
Score = 135 bits (339), Expect = 6e-31
Identities = 73/140 (52%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Frame = -1
Query: 622 VKASLAPQQKSEFISSLKA-AGHHVAMVGDGINDAPALAVADVGIALQNEAQENAASDAA 446
V A + P +K+ FI L+ +G VAMVGDGINDAPAL+ ADVGIAL + + A + A
Sbjct: 673 VMAGVPPAKKAAFIQELQTKSGAKVAMVGDGINDAPALSQADVGIALHSGT--DVAMETA 730
Query: 445 SIILLGNKISQVVDAIDLAQSTMAKVYQNLSWAVAYNVIAIPIAAGVLLPHFDFAMTPSL 266
I+L+ ++IS VV++I L+++T K+ QNL WA AYN I IP+AAGVLLP++ F ++PS
Sbjct: 731 QIVLMRDRISDVVESIHLSRATFNKIRQNLFWAFAYNTIGIPLAAGVLLPNWGFVLSPSG 790
Query: 265 SGGMMALSSIFVVSNSLLLQ 206
+ +MA SS+ VV+NSLLL+
Sbjct: 791 AAALMAFSSVSVVTNSLLLR 810
>ref|ZP_00072999.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 773
Score = 134 bits (338), Expect = 7e-31
Identities = 68/137 (49%), Positives = 97/137 (70%)
Frame = -1
Query: 616 ASLAPQQKSEFISSLKAAGHHVAMVGDGINDAPALAVADVGIALQNEAQENAASDAASII 437
A + P+ K+E I++L++ G V MVGDGINDAPALA A+VGI +Q + A + A I+
Sbjct: 635 AEVPPEGKAEAIAALQSKGEKVGMVGDGINDAPALAQANVGIGMQTGT--DVAMETADIV 692
Query: 436 LLGNKISQVVDAIDLAQSTMAKVYQNLSWAVAYNVIAIPIAAGVLLPHFDFAMTPSLSGG 257
L+ NK+ VV++I L+++T K+ QNL WA AYN++ IP+A GVLLP + PS +G
Sbjct: 693 LMQNKLMDVVESIKLSRATFNKIRQNLFWAFAYNIVGIPVAMGVLLPSLGIILNPSAAGA 752
Query: 256 MMALSSIFVVSNSLLLQ 206
+MA SS+ VV+NSLLL+
Sbjct: 753 LMAFSSVSVVTNSLLLR 769
>emb|CAA20565.1| metal-transporting P-type ATPase (fragment) [Arabidopsis thaliana]
Length = 870
Score = 132 bits (331), Expect = 5e-30
Identities = 68/139 (48%), Positives = 101/139 (71%)
Frame = -1
Query: 622 VKASLAPQQKSEFISSLKAAGHHVAMVGDGINDAPALAVADVGIALQNEAQENAASDAAS 443
V A + P +K FI+ L+ VAMVGDGINDA ALA ++VG+A+ A AAS+ +
Sbjct: 701 VIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGGGA--GAASEVSP 758
Query: 442 IILLGNKISQVVDAIDLAQSTMAKVYQNLSWAVAYNVIAIPIAAGVLLPHFDFAMTPSLS 263
++L+GN+++Q++DA++L++ TM V QNL WA YN++ IPIAAGVLLP +TPS++
Sbjct: 759 VVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMA 818
Query: 262 GGMMALSSIFVVSNSLLLQ 206
G +M +SS+ V++NSLLL+
Sbjct: 819 GALMGVSSLGVMTNSLLLR 837
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 528,741,634
Number of Sequences: 1393205
Number of extensions: 11544137
Number of successful extensions: 35459
Number of sequences better than 10.0: 1489
Number of HSP's better than 10.0 without gapping: 32249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34676
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
