Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC013004A_C01 KMC013004A_c01
(476 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL99045.1|AF487527_1 D1 protease-like protein precursor [Nic... 41 0.006
dbj|BAB63538.1| putative carboxy-terminal proteinase D1-like pro... 31 6.0
emb|CAC36034.1| bA84N7.1 (novel protein similar to diacylglycero... 31 6.0
>gb|AAL99045.1|AF487527_1 D1 protease-like protein precursor [Nicotiana plumbaginifolia]
Length = 467
Score = 41.2 bits (95), Expect = 0.006
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 475 GIEPDFQKLPAWDDVTQRLSKCSMLQKG 392
G++PDF+ PAW +VT RLSKC Q G
Sbjct: 440 GVDPDFRNFPAWSEVTNRLSKCHKPQGG 467
>dbj|BAB63538.1| putative carboxy-terminal proteinase D1-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 431
Score = 31.2 bits (69), Expect = 6.0
Identities = 10/22 (45%), Positives = 19/22 (85%)
Frame = -2
Query: 475 GIEPDFQKLPAWDDVTQRLSKC 410
GIEPD++++P +++ T+ LS+C
Sbjct: 404 GIEPDYRRIPDFNEATEYLSRC 425
>emb|CAC36034.1| bA84N7.1 (novel protein similar to diacylglycerol kinase eta
(DGKH)) [Homo sapiens]
Length = 1120
Score = 31.2 bits (69), Expect = 6.0
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3
Query: 264 TRDWLGTFVTVPSNQDELNILDI*VRRNELKKYARVCIQEA 142
+++ LG VT PS+Q + +I +R N LKK R I+EA
Sbjct: 531 SKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA 571
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 369,073,307
Number of Sequences: 1393205
Number of extensions: 6987067
Number of successful extensions: 14531
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14528
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
