Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012858A_C01 KMC012858A_c01
(595 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32128.1| multifunctional aquaporin [Medicago truncatula] 148 4e-35
emb|CAB45652.1| nodulin26-like major intrinsic protein [Pisum sa... 147 1e-34
pir||S52003 major intrinsic protein - rice gi|440869|dbj|BAA0425... 146 2e-34
pir||S01444 nodulin-26 precursor - soybean 145 4e-34
gb|AAK26750.1| NOD26-like membrane integral protein ZmNIP1-1 [Ze... 145 4e-34
>gb|AAL32128.1| multifunctional aquaporin [Medicago truncatula]
Length = 276
Score = 148 bits (374), Expect = 4e-35
Identities = 66/92 (71%), Positives = 82/92 (88%)
Frame = -2
Query: 594 FHLMFAISGVSTDNRAIGEMAGLAIGATILLNVIIAGPITGASMNPARSLGPAIVHSEYK 415
F+LMF ISGV+TD RAIGE+AG+AIG+T+LLNV+IAGP+TGASMNP R+LGPA VH+EY+
Sbjct: 166 FYLMFTISGVATDTRAIGELAGIAIGSTLLLNVMIAGPVTGASMNPVRTLGPAFVHNEYR 225
Query: 414 GIWIYLVSPVLGAVAGTWSYNFIRYTNYTLHQ 319
GIWIYL+SP+LGA+AG W YN +RYTN L +
Sbjct: 226 GIWIYLLSPILGAIAGAWVYNTVRYTNKPLRE 257
>emb|CAB45652.1| nodulin26-like major intrinsic protein [Pisum sativum]
Length = 270
Score = 147 bits (370), Expect = 1e-34
Identities = 64/87 (73%), Positives = 81/87 (92%)
Frame = -2
Query: 594 FHLMFAISGVSTDNRAIGEMAGLAIGATILLNVIIAGPITGASMNPARSLGPAIVHSEYK 415
F+LMF ISGV+TDNRAIGE+AG+A+G+T+LLNV+ AGPITGASMNPARS+GPA VH+EY+
Sbjct: 166 FYLMFIISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPAFVHNEYR 225
Query: 414 GIWIYLVSPVLGAVAGTWSYNFIRYTN 334
GIWIY++SP++GAV+G W YN IRYT+
Sbjct: 226 GIWIYMISPIVGAVSGAWVYNVIRYTD 252
>pir||S52003 major intrinsic protein - rice gi|440869|dbj|BAA04257.1| major
intrinsic protein [Oryza sativa]
Length = 284
Score = 146 bits (369), Expect = 2e-34
Identities = 67/92 (72%), Positives = 81/92 (87%)
Frame = -2
Query: 594 FHLMFAISGVSTDNRAIGEMAGLAIGATILLNVIIAGPITGASMNPARSLGPAIVHSEYK 415
F+LMF ISGV+TDNRAIGE+AGLA+GATILLNV+IAGPI+GASMNPARSLGPA++ EY+
Sbjct: 175 FYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYR 234
Query: 414 GIWIYLVSPVLGAVAGTWSYNFIRYTNYTLHQ 319
IW+Y+V PV GAVAG W+YN IR+TN L +
Sbjct: 235 SIWVYIVGPVAGAVAGAWAYNIIRFTNKPLRE 266
>pir||S01444 nodulin-26 precursor - soybean
Length = 271
Score = 145 bits (366), Expect = 4e-34
Identities = 65/92 (70%), Positives = 80/92 (86%)
Frame = -2
Query: 594 FHLMFAISGVSTDNRAIGEMAGLAIGATILLNVIIAGPITGASMNPARSLGPAIVHSEYK 415
F LMF I GV+TDNRA+GE+AG+AIG+T+LLNVII GP+TGASMNPARSLGPA VH EY+
Sbjct: 165 FFLMFVICGVATDNRAVGELAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGEYE 224
Query: 414 GIWIYLVSPVLGAVAGTWSYNFIRYTNYTLHQ 319
GIWIYL++PV+GA+AG W YN +RYT+ L +
Sbjct: 225 GIWIYLLAPVVGAIAGAWVYNIVRYTDKPLSE 256
>gb|AAK26750.1| NOD26-like membrane integral protein ZmNIP1-1 [Zea mays]
Length = 282
Score = 145 bits (366), Expect = 4e-34
Identities = 66/92 (71%), Positives = 81/92 (87%)
Frame = -2
Query: 594 FHLMFAISGVSTDNRAIGEMAGLAIGATILLNVIIAGPITGASMNPARSLGPAIVHSEYK 415
F+LMF ISGV+TDNRAIGE+AGLA+GATILLNV+IAGP++GASMNPARS+GPA+V EY
Sbjct: 171 FYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGEYT 230
Query: 414 GIWIYLVSPVLGAVAGTWSYNFIRYTNYTLHQ 319
IW+Y+V PV+GAVAG W+YN IR+TN L +
Sbjct: 231 SIWVYVVGPVVGAVAGAWAYNLIRFTNKPLRE 262
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 527,970,109
Number of Sequences: 1393205
Number of extensions: 11566058
Number of successful extensions: 28540
Number of sequences better than 10.0: 628
Number of HSP's better than 10.0 without gapping: 27226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28354
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
