Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012815A_C01 KMC012815A_c01
(784 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191107.1| elicitor responsive/phloem -like protein; prote... 111 2e-34
pir||T04363 FIERG2 protein - rice gi|2920839|gb|AAC04628.1| Os-F... 84 1e-26
dbj|BAC06445.1| RPP17-1 [Oryza sativa (japonica cultivar-group)] 84 6e-25
sp|Q9ZT47|P16A_CUCMA 16 kDa phloem protein 1 gi|11357141|pir||T5... 89 1e-24
dbj|BAB86442.1| putative FIERG1 protein [Oryza sativa (japonica ... 82 4e-24
>ref|NP_191107.1| elicitor responsive/phloem -like protein; protein id: At3g55470.1
[Arabidopsis thaliana] gi|11357279|pir||T47686 elicitor
responsive/phloem-like protein - Arabidopsis thaliana
gi|7076790|emb|CAB75905.1| elicitor
responsive/phloem-like protein [Arabidopsis thaliana]
gi|26449380|dbj|BAC41817.1| putative elicitor
responsive/phloem [Arabidopsis thaliana]
Length = 156
Score = 111 bits (277), Expect(2) = 2e-34
Identities = 48/108 (44%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
Frame = -2
Query: 552 GAESLVWDEKFIFRVEYPGSGGPYKLNLKIMDKDVFSADDFVGQATIYVKDLLAEGAENG 373
G + W++K +R E+PGSG YKL +K+MD D FS+DDF+G+AT++VK+LL G E G
Sbjct: 47 GGRNPTWNDKLKWRAEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKG 106
Query: 372 SAEIRTRKYSVVRADPSYCGEIEVGITFKRKEEE-YSNHDFGGWKESE 232
+AE+R KY++V +D S+ GE+ +G+++ ++ FGGWK S+
Sbjct: 107 TAELRPTKYNIVDSDLSFVGELLIGVSYSLLQDRGMDGEQFGGWKHSQ 154
Score = 57.4 bits (137), Expect(2) = 2e-34
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = -1
Query: 685 ASGLMEVLLVKAKGLQEHDIFARMDPYVLLQYKGQERKSSVLHE-GGRKP 539
A G++EV L+ KGL+ D ++DPYV +QYKGQ RKSSV E GGR P
Sbjct: 2 AVGILEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNP 51
>pir||T04363 FIERG2 protein - rice gi|2920839|gb|AAC04628.1| Os-FIERG2 gene
product [Oryza sativa] gi|21998842|dbj|BAC06446.1|
RPP17-2 [Oryza sativa (japonica cultivar-group)]
Length = 156
Score = 84.3 bits (207), Expect(2) = 1e-26
Identities = 44/102 (43%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = -2
Query: 534 WDEKFIFRVEYPGSGGPYKLNLKIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAEIRT 355
W+E F F++ + G +KL L++MD D FS DDF+G+ATI V DL++ G E+G+ E+
Sbjct: 53 WNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSE 112
Query: 354 RKYSVVRADPSYCGEIEVGITF--KRKEEEYSNHDFGGWKES 235
K+ VV AD +Y GEI V +TF K ++++ GGW S
Sbjct: 113 SKHRVVLADKTYHGEIRVSLTFTASAKAQDHA-EQVGGWAHS 153
Score = 57.8 bits (138), Expect(2) = 1e-26
Identities = 26/48 (54%), Positives = 36/48 (74%)
Frame = -1
Query: 682 SGLMEVLLVKAKGLQEHDIFARMDPYVLLQYKGQERKSSVLHEGGRKP 539
SG++EV LV AKGL +D ++DPYV++QY+ QERKSSV + G+ P
Sbjct: 4 SGVLEVHLVDAKGLTGNDFLGKIDPYVVVQYRSQERKSSVARDQGKNP 51
>dbj|BAC06445.1| RPP17-1 [Oryza sativa (japonica cultivar-group)]
Length = 159
Score = 84.3 bits (207), Expect(2) = 6e-25
Identities = 44/102 (43%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = -2
Query: 534 WDEKFIFRVEYPGSGGPYKLNLKIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAEIRT 355
W+E F F++ + G +KL L++MD D FS DDF+G+ATI V DL++ G E+G+ E+
Sbjct: 56 WNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSE 115
Query: 354 RKYSVVRADPSYCGEIEVGITF--KRKEEEYSNHDFGGWKES 235
K+ VV AD +Y GEI V +TF K ++++ GGW S
Sbjct: 116 SKHRVVLADKTYHGEIRVSLTFTASAKAQDHA-EQVGGWAHS 156
Score = 52.4 bits (124), Expect(2) = 6e-25
Identities = 26/51 (50%), Positives = 36/51 (69%), Gaps = 3/51 (5%)
Frame = -1
Query: 682 SGLMEVLLVKAKGLQEHDIFA---RMDPYVLLQYKGQERKSSVLHEGGRKP 539
SG++EV LV AKGL +D ++DPYV++QY+ QERKSSV + G+ P
Sbjct: 4 SGVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNP 54
>sp|Q9ZT47|P16A_CUCMA 16 kDa phloem protein 1 gi|11357141|pir||T50648 phloem protein
[imported] - winter squash gi|4164539|gb|AAD05496.1|
phloem protein [Cucurbita maxima]
Length = 150
Score = 89.0 bits (219), Expect(2) = 1e-24
Identities = 41/84 (48%), Positives = 54/84 (63%)
Frame = -2
Query: 537 VWDEKFIFRVEYPGSGGPYKLNLKIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAEIR 358
+WDEKF F EYPGSGG + + K+MD D DD++G I VK+LLAEG G +E+
Sbjct: 52 LWDEKFKFLAEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVKNLLAEGVRKGKSEMP 111
Query: 357 TRKYSVVRADPSYCGEIEVGITFK 286
R Y V+ + GEIEVG++FK
Sbjct: 112 PRMYHVLAHKIHFKGEIEVGVSFK 135
Score = 46.6 bits (109), Expect(2) = 1e-24
Identities = 23/48 (47%), Positives = 29/48 (59%), Gaps = 1/48 (2%)
Frame = -1
Query: 679 GLMEVLLVKAKGLQEHDIFAR-MDPYVLLQYKGQERKSSVLHEGGRKP 539
G+MEV L+ KGLQ HD + +DPY + +KGQER S V G P
Sbjct: 4 GMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPNP 51
>dbj|BAB86442.1| putative FIERG1 protein [Oryza sativa (japonica cultivar-group)]
Length = 151
Score = 81.6 bits (200), Expect(2) = 4e-24
Identities = 40/89 (44%), Positives = 58/89 (64%)
Frame = -2
Query: 534 WDEKFIFRVEYPGSGGPYKLNLKIMDKDVFSADDFVGQATIYVKDLLAEGAENGSAEIRT 355
W+E F F++ + G +KL L++MD D FS DDF+G+ATI V DL++ G E+G+ E+
Sbjct: 56 WNEVFKFQINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSE 115
Query: 354 RKYSVVRADPSYCGEIEVGITFKRKEEEY 268
K+ VV AD +Y GEI V +TF + Y
Sbjct: 116 SKHRVVLADKTYHGEIRVSLTFTASAKMY 144
Score = 52.4 bits (124), Expect(2) = 4e-24
Identities = 26/51 (50%), Positives = 36/51 (69%), Gaps = 3/51 (5%)
Frame = -1
Query: 682 SGLMEVLLVKAKGLQEHDIFA---RMDPYVLLQYKGQERKSSVLHEGGRKP 539
SG++EV LV AKGL +D ++DPYV++QY+ QERKSSV + G+ P
Sbjct: 4 SGVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNP 54
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 723,730,051
Number of Sequences: 1393205
Number of extensions: 16956209
Number of successful extensions: 101885
Number of sequences better than 10.0: 470
Number of HSP's better than 10.0 without gapping: 53080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79792
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38935490438
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
