Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012813A_C01 KMC012813A_c01
(565 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB17995.1| glyoxalase II [Arabidopsis thaliana] 172 3e-42
ref|NP_564636.1| glyoxalase II, putative (hydroxyacylglutathione... 170 1e-41
pir||H96575 probable glyoxalase II, 78941-80643 [imported] - Ara... 170 1e-41
dbj|BAB90501.1| putative glyoxalase II [Oryza sativa (japonica c... 126 2e-28
gb|AAH08250.1|AAH08250 Similar to RIKEN cDNA 0610025L15 gene [Ho... 122 3e-27
>gb|AAB17995.1| glyoxalase II [Arabidopsis thaliana]
Length = 256
Score = 172 bits (435), Expect = 3e-42
Identities = 78/91 (85%), Positives = 89/91 (97%)
Frame = -1
Query: 565 RGCGRTDFQGGSSEQLYKSVHSQIFTLPKDTLLYPAHDYKGFTVSTVGEELQYNPRLTKD 386
RGCGRTDFQGGSS+QLY+SVHSQIF+LPKDTL+YPAHDYKGF VSTVGEE+Q+NPRLTKD
Sbjct: 158 RGCGRTDFQGGSSDQLYESVHSQIFSLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKD 217
Query: 385 EETFKNIMANLSLSYPKMIDIAVPANMVCGM 293
+ETFK IM+NL+LSYPKMID+AVPANMVCG+
Sbjct: 218 KETFKTIMSNLNLSYPKMIDVAVPANMVCGL 248
>ref|NP_564636.1| glyoxalase II, putative (hydroxyacylglutathione hydrolase); protein
id: At1g53580.1, supported by cDNA: gi_15450394,
supported by cDNA: gi_1644426, supported by cDNA:
gi_16648756 [Arabidopsis thaliana]
gi|15450395|gb|AAK96491.1| At1g53580/F22G10.9
[Arabidopsis thaliana] gi|16648757|gb|AAL25570.1|
At1g53580/F22G10.9 [Arabidopsis thaliana]
gi|22655048|gb|AAM98115.1| At1g53580/F22G10.9
[Arabidopsis thaliana]
Length = 256
Score = 170 bits (431), Expect = 1e-41
Identities = 78/91 (85%), Positives = 88/91 (95%)
Frame = -1
Query: 565 RGCGRTDFQGGSSEQLYKSVHSQIFTLPKDTLLYPAHDYKGFTVSTVGEELQYNPRLTKD 386
RGCGRTDFQ GSS+QLY+SVHSQIFTLPKDTL+YPAHDYKGF VSTVGEE+Q+NPRLTKD
Sbjct: 158 RGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKD 217
Query: 385 EETFKNIMANLSLSYPKMIDIAVPANMVCGM 293
+ETFK IM+NL+LSYPKMID+AVPANMVCG+
Sbjct: 218 KETFKTIMSNLNLSYPKMIDVAVPANMVCGL 248
>pir||H96575 probable glyoxalase II, 78941-80643 [imported] - Arabidopsis
thaliana gi|12324040|gb|AAG51989.1|AC024260_27
glyoxalase II, putative; 78941-80643 [Arabidopsis
thaliana]
Length = 292
Score = 170 bits (431), Expect = 1e-41
Identities = 78/91 (85%), Positives = 88/91 (95%)
Frame = -1
Query: 565 RGCGRTDFQGGSSEQLYKSVHSQIFTLPKDTLLYPAHDYKGFTVSTVGEELQYNPRLTKD 386
RGCGRTDFQ GSS+QLY+SVHSQIFTLPKDTL+YPAHDYKGF VSTVGEE+Q+NPRLTKD
Sbjct: 194 RGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKD 253
Query: 385 EETFKNIMANLSLSYPKMIDIAVPANMVCGM 293
+ETFK IM+NL+LSYPKMID+AVPANMVCG+
Sbjct: 254 KETFKTIMSNLNLSYPKMIDVAVPANMVCGL 284
>dbj|BAB90501.1| putative glyoxalase II [Oryza sativa (japonica cultivar-group)]
Length = 407
Score = 126 bits (317), Expect = 2e-28
Identities = 62/91 (68%), Positives = 70/91 (76%)
Frame = -1
Query: 565 RGCGRTDFQGGSSEQLYKSVHSQIFTLPKDTLLYPAHDYKGFTVSTVGEELQYNPRLTKD 386
R CGRTDFQ IFTLPKDTLLYP HDYKGFTVSTV EE+ YN RLTKD
Sbjct: 323 RACGRTDFQ--------------IFTLPKDTLLYPGHDYKGFTVSTVEEEVAYNARLTKD 368
Query: 385 EETFKNIMANLSLSYPKMIDIAVPANMVCGM 293
+ETFK IM NL+L+YPKMID+AVPAN++CG+
Sbjct: 369 KETFKKIMDNLNLAYPKMIDVAVPANLLCGI 399
>gb|AAH08250.1|AAH08250 Similar to RIKEN cDNA 0610025L15 gene [Homo sapiens]
gi|25165940|dbj|BAA34595.2| HSCO [Homo sapiens]
Length = 254
Score = 122 bits (306), Expect = 3e-27
Identities = 60/91 (65%), Positives = 67/91 (72%)
Frame = -1
Query: 565 RGCGRTDFQGGSSEQLYKSVHSQIFTLPKDTLLYPAHDYKGFTVSTVGEELQYNPRLTKD 386
RGCGRTDFQ G ++ LY SVH +IFTLP D L+YPAHDY GFTVSTV EE NPRLT
Sbjct: 159 RGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLS 218
Query: 385 EETFKNIMANLSLSYPKMIDIAVPANMVCGM 293
E F IM NL+L P+ ID AVPANM CG+
Sbjct: 219 CEEFVKIMGNLNLPKPQQIDFAVPANMRCGV 249
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,300,677
Number of Sequences: 1393205
Number of extensions: 9554514
Number of successful extensions: 22548
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 21935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22519
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
