Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012810A_C01 KMC012810A_c01
(642 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42257.1| putative carboxyphosphonoenolpyruvate mutase [Ar... 103 1e-42
ref|NP_181847.1| putative carboxyphosphonoenolpyruvate mutase; p... 92 7e-39
ref|ZP_00074372.1| hypothetical protein [Trichodesmium erythraeu... 83 1e-25
ref|NP_485903.1| carboxyphosphonoenolpyruvate phosphonomutase [N... 84 2e-23
ref|NP_559494.1| carboxyphosphonoenolpyruvate phosphonomutase (p... 79 1e-22
>dbj|BAC42257.1| putative carboxyphosphonoenolpyruvate mutase [Arabidopsis thaliana]
gi|28827730|gb|AAO50709.1| putative
carboxyphosphonoenolpyruvate mutase [Arabidopsis
thaliana]
Length = 479
Score = 103 bits (258), Expect(2) = 1e-42
Identities = 50/84 (59%), Positives = 63/84 (74%)
Frame = +1
Query: 160 LHSTPLHSTGSSSRNMEKGAKALRRLLQSPGVHQGPIAFNALSAKLVESAGFPFCFTGGF 339
++ST + +++ AK LR ++QSPGV QGP F+ALSAKL+E AGFP+C T GF
Sbjct: 54 VNSTVVSDESGNAKLPSSPAKKLRNIMQSPGVLQGPCCFDALSAKLIERAGFPYCITSGF 113
Query: 340 AISAARLALPDAGLISYGEMVDQG 411
+ISA+RL LPD GLISYGEMVDQG
Sbjct: 114 SISASRLGLPDKGLISYGEMVDQG 137
Score = 91.7 bits (226), Expect(2) = 1e-42
Identities = 45/75 (60%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = +2
Query: 419 VTQAISVPVIGDADTGYGNSVNVKRTGKGYIAAGLAGIMLEDQISPKACGHTQG-RKVVS 595
+TQ++S+PVIGD GYGN++NVKRT KGYI AG AGI++ D++ C +T+ R+VVS
Sbjct: 140 ITQSVSIPVIGDGGNGYGNAMNVKRTVKGYIKAGFAGIIINDEV---CCENTKSERRVVS 196
Query: 596 REEAVMRIXAAIDAR 640
REEAVMR+ AA+DAR
Sbjct: 197 REEAVMRVKAAVDAR 211
>ref|NP_181847.1| putative carboxyphosphonoenolpyruvate mutase; protein id:
At2g43180.1 [Arabidopsis thaliana]
gi|25408843|pir||A84863 probable
carboxyphosphonoenolpyruvate mutase [imported] -
Arabidopsis thaliana gi|3763927|gb|AAC64307.1| putative
carboxyphosphonoenolpyruvate mutase [Arabidopsis
thaliana]
Length = 492
Score = 91.7 bits (226), Expect(2) = 7e-39
Identities = 45/75 (60%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = +2
Query: 419 VTQAISVPVIGDADTGYGNSVNVKRTGKGYIAAGLAGIMLEDQISPKACGHTQG-RKVVS 595
+TQ++S+PVIGD GYGN++NVKRT KGYI AG AGI++ D++ C +T+ R+VVS
Sbjct: 135 ITQSVSIPVIGDGGNGYGNAMNVKRTVKGYIKAGFAGIIINDEV---CCENTKSERRVVS 191
Query: 596 REEAVMRIXAAIDAR 640
REEAVMR+ AA+DAR
Sbjct: 192 REEAVMRVKAAVDAR 206
Score = 91.3 bits (225), Expect(2) = 7e-39
Identities = 47/84 (55%), Positives = 59/84 (69%)
Frame = +1
Query: 160 LHSTPLHSTGSSSRNMEKGAKALRRLLQSPGVHQGPIAFNALSAKLVESAGFPFCFTGGF 339
++ST + +++ AK LR ++QSPGV QGP F+ALSAKL+E AGFP+C T
Sbjct: 54 VNSTVVSDESGNAKLPSSPAKKLRNIMQSPGVLQGPCCFDALSAKLIERAGFPYCIT--- 110
Query: 340 AISAARLALPDAGLISYGEMVDQG 411
SA+RL LPD GLISYGEMVDQG
Sbjct: 111 --SASRLGLPDKGLISYGEMVDQG 132
>ref|ZP_00074372.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 291
Score = 82.8 bits (203), Expect(2) = 1e-25
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +2
Query: 410 VRLVTQAISVPVIGDADTGYGNSVNVKRTGKGYIAAGLAGIMLEDQISPKACGHTQGRKV 589
+R +T+++++P++ D DTGYGN +NV RT + G+AGI+LEDQ PK CGH QG++V
Sbjct: 68 IRRITESVNIPLVADIDTGYGNPLNVIRTVTDIVNMGVAGIILEDQEWPKKCGHFQGKRV 127
Query: 590 VSREEAVMRIXAAIDAR 640
+ E V +I AA+ AR
Sbjct: 128 IPMAEHVEKIKAAVHAR 144
Score = 55.8 bits (133), Expect(2) = 1e-25
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +1
Query: 220 KALRRLLQSPGVHQGPIAFNALSAKLVESAGFPFCFTGGFAISAARLALPDAGLISYGEM 399
K LR++L+ PG P ++ + AK+VE GFP FT GF IS + L PD G I+ EM
Sbjct: 5 KKLRQILEQPGALVLPGVYDCIGAKIVEQIGFPVVFTSGFGISGSTLGRPDYGFITATEM 64
Query: 400 V 402
+
Sbjct: 65 L 65
>ref|NP_485903.1| carboxyphosphonoenolpyruvate phosphonomutase [Nostoc sp. PCC 7120]
gi|25324632|pir||AI2038 carboxyphosphonoenolpyruvate
phosphonomutase [imported] - Nostoc sp. (strain PCC
7120) gi|17130953|dbj|BAB73562.1|
carboxyphosphonoenolpyruvate phosphonomutase [Nostoc sp.
PCC 7120]
Length = 287
Score = 83.6 bits (205), Expect(2) = 2e-23
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = +2
Query: 419 VTQAISVPVIGDADTGYGNSVNVKRTGKGYIAAGLAGIMLEDQISPKACGHTQGRKVVSR 598
+ Q++SVP+I D DTGYGN++NV RT K + G+AG++LEDQ PK CGH +G++V+
Sbjct: 71 IAQSVSVPLIADLDTGYGNALNVMRTIKDAVQLGVAGVLLEDQEWPKKCGHFEGKRVIPT 130
Query: 599 EEAVMRIXAAIDAR 640
E +I AA++AR
Sbjct: 131 SEHAGKIRAAVEAR 144
Score = 47.4 bits (111), Expect(2) = 2e-23
Identities = 25/57 (43%), Positives = 35/57 (60%)
Frame = +1
Query: 226 LRRLLQSPGVHQGPIAFNALSAKLVESAGFPFCFTGGFAISAARLALPDAGLISYGE 396
LR+LL +P + P ++ LSAKL E+ GF T GF I+A+ L LPD G ++ E
Sbjct: 7 LRQLLANPEIIVIPGIYDCLSAKLAENIGFDVVATSGFGIAASTLGLPDYGFLTATE 63
>ref|NP_559494.1| carboxyphosphonoenolpyruvate phosphonomutase (prpB) [Pyrobaculum
aerophilum] gi|18160313|gb|AAL63676.1|
carboxyphosphonoenolpyruvate phosphonomutase (prpB)
[Pyrobaculum aerophilum]
Length = 308
Score = 79.0 bits (193), Expect(2) = 1e-22
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +2
Query: 410 VRLVTQAISVPVIGDADTGYGNSVNVKRTGKGYIAAGLAGIMLEDQISPKACGHTQGRKV 589
V+ + A+ +PVI D DTGYG ++NV R + + A G AG+ LEDQ+ PK CGH G+ +
Sbjct: 74 VKYIVDAVDIPVIVDIDTGYGEALNVMRAVREFEAIGAAGVQLEDQVLPKKCGHLSGKAL 133
Query: 590 VSREEAVMRIXAAIDAR 640
+ +E +I AA++AR
Sbjct: 134 IPPDEMAKKIRAAVEAR 150
Score = 49.7 bits (117), Expect(2) = 1e-22
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +1
Query: 199 RNMEKGAKALRRLLQSPGVHQGPIAFNALSAKLVESAGFPFCFTGGFAISAARLALPDAG 378
++ ++G LR L+ PG+ P FNAL+A + + GF + G A++A+ +ALPD G
Sbjct: 5 KSEKRGPGLLREELKRPGIVLVPGVFNALTALMAQDLGFRAVYVSGAAVTAS-MALPDLG 63
Query: 379 LISYGEMV 402
LI+ EMV
Sbjct: 64 LITMDEMV 71
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 625,444,136
Number of Sequences: 1393205
Number of extensions: 15608352
Number of successful extensions: 91286
Number of sequences better than 10.0: 333
Number of HSP's better than 10.0 without gapping: 71119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88474
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
