Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012796A_C01 KMC012796A_c01
(765 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB32405.1| NQK1 MAPKK [Nicotiana tabacum] 336 2e-91
emb|CAC24705.1| MAP kinase [Nicotiana tabacum] 330 2e-89
ref|NP_200469.1| protein kinase MEK1 homolog; protein id: At5g56... 318 5e-86
gb|AAG40578.1|AF216314_1 MAP kinase kinase 1 [Oryza sativa] 298 6e-80
pir||T02056 protein kinase MEK1 (EC 2.7.1.-) - maize gi|2737973|... 295 4e-79
>dbj|BAB32405.1| NQK1 MAPKK [Nicotiana tabacum]
Length = 354
Score = 336 bits (861), Expect = 2e-91
Identities = 158/180 (87%), Positives = 171/180 (94%)
Frame = -3
Query: 763 LQGLVYLHNERHVIHRDSKPSHLLVNHQGEVKITDFGVSAMLATSMGQRDTFVGTYNYMS 584
LQGLVYLHNERHVIHRD KPS+LLVNH+GEVKITDFGVSAMLA+SMGQRDTFVGTYNYM+
Sbjct: 175 LQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMA 234
Query: 583 PERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAP 404
PERISGSTYDY SDIWSLGMV+LECAIGRFPYIQSEDQQAWPSFYELL AIV SPPPSAP
Sbjct: 235 PERISGSTYDYKSDIWSLGMVILECAIGRFPYIQSEDQQAWPSFYELLEAIVSSPPPSAP 294
Query: 403 SDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPFIKKFEDKDLDLEILVGSLEPPINFPR 224
+DQFSPEFCSFVS+CIQKDP+DR ++L+LL HPFIKKFEDKD+D ILV SLEPP+NFPR
Sbjct: 295 ADQFSPEFCSFVSACIQKDPRDRSSALDLLSHPFIKKFEDKDIDFGILVSSLEPPVNFPR 354
>emb|CAC24705.1| MAP kinase [Nicotiana tabacum]
Length = 354
Score = 330 bits (845), Expect = 2e-89
Identities = 156/180 (86%), Positives = 169/180 (93%)
Frame = -3
Query: 763 LQGLVYLHNERHVIHRDSKPSHLLVNHQGEVKITDFGVSAMLATSMGQRDTFVGTYNYMS 584
LQGLVYLHNERHVIHRD KPS+LLVNH+GEVKITDF VSAMLA+SMGQRDTFVGTYNYM+
Sbjct: 175 LQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFXVSAMLASSMGQRDTFVGTYNYMA 234
Query: 583 PERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAP 404
PERISGSTYDY SDIWSLGMV+LECAIGRFPYIQSEDQQAWPSFYELL AIV SPPPSAP
Sbjct: 235 PERISGSTYDYKSDIWSLGMVILECAIGRFPYIQSEDQQAWPSFYELLEAIVSSPPPSAP 294
Query: 403 SDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPFIKKFEDKDLDLEILVGSLEPPINFPR 224
+ QFSPEFCSFVS+CIQKDP+DR ++L+LL HPFIKKFEDKD+D ILV SLEPP+NFPR
Sbjct: 295 AVQFSPEFCSFVSACIQKDPRDRSSALDLLSHPFIKKFEDKDIDFGILVSSLEPPVNFPR 354
>ref|NP_200469.1| protein kinase MEK1 homolog; protein id: At5g56580.1 [Arabidopsis
thaliana] gi|10176761|dbj|BAB09875.1| protein kinase
MEK1 homolog [Arabidopsis thaliana]
Length = 356
Score = 318 bits (815), Expect = 5e-86
Identities = 153/180 (85%), Positives = 168/180 (93%)
Frame = -3
Query: 763 LQGLVYLHNERHVIHRDSKPSHLLVNHQGEVKITDFGVSAMLATSMGQRDTFVGTYNYMS 584
L GLVYLHNERHVIHRD KPS+LLVNH+GEVKI+DFGVSA LA+SMGQRDTFVGTYNYMS
Sbjct: 177 LLGLVYLHNERHVIHRDIKPSNLLVNHKGEVKISDFGVSASLASSMGQRDTFVGTYNYMS 236
Query: 583 PERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAP 404
PERISGSTYDYSSDIWSLGM VLECAIGRFPY++SEDQQ PSFYELLAAIVE+PPP+AP
Sbjct: 237 PERISGSTYDYSSDIWSLGMSVLECAIGRFPYLESEDQQNPPSFYELLAAIVENPPPTAP 296
Query: 403 SDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPFIKKFEDKDLDLEILVGSLEPPINFPR 224
SDQFSPEFCSFVS+CIQKDP R +SL+LL HPFIKKFEDKD+DL ILVG+LEPP+N+ R
Sbjct: 297 SDQFSPEFCSFVSACIQKDPPARASSLDLLSHPFIKKFEDKDIDLGILVGTLEPPVNYLR 356
>gb|AAG40578.1|AF216314_1 MAP kinase kinase 1 [Oryza sativa]
Length = 355
Score = 298 bits (763), Expect = 6e-80
Identities = 141/177 (79%), Positives = 163/177 (91%)
Frame = -3
Query: 763 LQGLVYLHNERHVIHRDSKPSHLLVNHQGEVKITDFGVSAMLATSMGQRDTFVGTYNYMS 584
L+GL+YLH+ERHVIHRD KPS+LLVN +GEVKITDFGVSA+LA+SMGQRDTFVGTYNYM+
Sbjct: 177 LEGLLYLHHERHVIHRDIKPSNLLVNRKGEVKITDFGVSAVLASSMGQRDTFVGTYNYMA 236
Query: 583 PERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAP 404
PERISGS+YDY SDIWSLG+V+LECAIGRFPYI SE + W SFYELL AIV+ PPPSAP
Sbjct: 237 PERISGSSYDYKSDIWSLGLVILECAIGRFPYIPSEG-EGWLSFYELLEAIVDQPPPSAP 295
Query: 403 SDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPFIKKFEDKDLDLEILVGSLEPPIN 233
+DQFSPEFC+F+SSCIQKDP +R+++ ELL+HPFIKKFEDKDLDL ILV SLEPP+N
Sbjct: 296 ADQFSPEFCAFISSCIQKDPAERMSASELLNHPFIKKFEDKDLDLRILVESLEPPMN 352
>pir||T02056 protein kinase MEK1 (EC 2.7.1.-) - maize gi|2737973|gb|AAC83393.1|
protein kinase ZmMEK1 [Zea mays]
Length = 355
Score = 295 bits (756), Expect = 4e-79
Identities = 139/179 (77%), Positives = 163/179 (90%)
Frame = -3
Query: 763 LQGLVYLHNERHVIHRDSKPSHLLVNHQGEVKITDFGVSAMLATSMGQRDTFVGTYNYMS 584
L+GL+YLH++RHVIHRD KPS+LLVN +GEVKITDFGVSA+LA+S+GQRDTFVGTYNYM+
Sbjct: 177 LEGLLYLHHQRHVIHRDIKPSNLLVNRKGEVKITDFGVSAVLASSIGQRDTFVGTYNYMA 236
Query: 583 PERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQAWPSFYELLAAIVESPPPSAP 404
PERISGSTYDY SDIWSLG+V+LECAIGRFPYI SE + W SFYELL AIV+ PPPSAP
Sbjct: 237 PERISGSTYDYKSDIWSLGLVILECAIGRFPYIPSEG-EGWLSFYELLEAIVDQPPPSAP 295
Query: 403 SDQFSPEFCSFVSSCIQKDPQDRLTSLELLDHPFIKKFEDKDLDLEILVGSLEPPINFP 227
+DQFSPEFCSF+SSCIQKDP R+++ ELL+HPF+KKFEDKDL+L ILV +LEPP+N P
Sbjct: 296 ADQFSPEFCSFISSCIQKDPAQRMSASELLNHPFLKKFEDKDLNLGILVENLEPPMNIP 354
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 668,954,667
Number of Sequences: 1393205
Number of extensions: 14927448
Number of successful extensions: 60638
Number of sequences better than 10.0: 10782
Number of HSP's better than 10.0 without gapping: 48775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51925
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37254821786
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
