Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012731A_C01 KMC012731A_c01
(441 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD09518.1| NTGP4 [Nicotiana tabacum] 87 4e-17
ref|NP_564431.1| expressed protein; protein id: At1g33970.1, sup... 85 2e-16
gb|AAN60299.1| unknown [Arabidopsis thaliana] 85 2e-16
pir||D86463 hypothetical protein F12G12.21 - Arabidopsis thalian... 85 2e-16
gb|AAG52214.1|AC022288_13 AIG1-like protein, 5' partial; 1-1205 ... 85 2e-16
>gb|AAD09518.1| NTGP4 [Nicotiana tabacum]
Length = 344
Score = 87.4 bits (215), Expect = 4e-17
Identities = 44/77 (57%), Positives = 63/77 (81%)
Frame = -3
Query: 436 GHSNKEILEYKKPAKQAYDDQLKRIAEMVESKLRDATLRLEQPLAKEPAARLKAEENANL 257
G+S +EILE K+ +++Y++QL+RI E+VESKL+D T RLE+ LAKE AARL+AE +A
Sbjct: 246 GYSKQEILELKEQMQKSYEEQLRRITEVVESKLKDTTHRLEEQLAKEQAARLEAELSAKE 305
Query: 256 ARVRSDKEIRELRKHLE 206
A+ +SD EIR+LR++LE
Sbjct: 306 AQKKSDNEIRKLREYLE 322
>ref|NP_564431.1| expressed protein; protein id: At1g33970.1, supported by cDNA:
37204. [Arabidopsis thaliana]
Length = 342
Score = 85.1 bits (209), Expect = 2e-16
Identities = 44/78 (56%), Positives = 57/78 (72%)
Frame = -3
Query: 439 EGHSNKEILEYKKPAKQAYDDQLKRIAEMVESKLRDATLRLEQPLAKEPAARLKAEENAN 260
+G+SN EI E+KK +YD QL RI EMVE+KLRD RLEQ L +E AARL+AE+ AN
Sbjct: 246 QGYSNNEIDEFKKQIDMSYDRQLSRITEMVETKLRDTAKRLEQQLGEEQAARLEAEKRAN 305
Query: 259 LARVRSDKEIRELRKHLE 206
+ RS EI++LR++LE
Sbjct: 306 EVQKRSSDEIKKLRENLE 323
>gb|AAN60299.1| unknown [Arabidopsis thaliana]
Length = 337
Score = 85.1 bits (209), Expect = 2e-16
Identities = 44/78 (56%), Positives = 57/78 (72%)
Frame = -3
Query: 439 EGHSNKEILEYKKPAKQAYDDQLKRIAEMVESKLRDATLRLEQPLAKEPAARLKAEENAN 260
+G+SN EI E+KK +YD QL RI EMVE+KLRD RLEQ L +E AARL+AE+ AN
Sbjct: 241 QGYSNNEIDEFKKQIDMSYDRQLSRITEMVETKLRDTAKRLEQQLGEEQAARLEAEKRAN 300
Query: 259 LARVRSDKEIRELRKHLE 206
+ RS EI++LR++LE
Sbjct: 301 EVQKRSSDEIKKLRENLE 318
>pir||D86463 hypothetical protein F12G12.21 - Arabidopsis thaliana
gi|10086478|gb|AAG12538.1|AC015446_19 Similar to AIG1
protein [Arabidopsis thaliana]
gi|10092443|gb|AAG12846.1|AC079286_3 disease resistance
protein AIG1; 5333-4002 [Arabidopsis thaliana]
gi|21593218|gb|AAM65167.1| AIG1-like protein, 5' partial
[Arabidopsis thaliana]
Length = 337
Score = 85.1 bits (209), Expect = 2e-16
Identities = 44/78 (56%), Positives = 57/78 (72%)
Frame = -3
Query: 439 EGHSNKEILEYKKPAKQAYDDQLKRIAEMVESKLRDATLRLEQPLAKEPAARLKAEENAN 260
+G+SN EI E+KK +YD QL RI EMVE+KLRD RLEQ L +E AARL+AE+ AN
Sbjct: 241 QGYSNNEIDEFKKQIDMSYDRQLSRITEMVETKLRDTAKRLEQQLGEEQAARLEAEKRAN 300
Query: 259 LARVRSDKEIRELRKHLE 206
+ RS EI++LR++LE
Sbjct: 301 EVQKRSSDEIKKLRENLE 318
>gb|AAG52214.1|AC022288_13 AIG1-like protein, 5' partial; 1-1205 [Arabidopsis thaliana]
Length = 294
Score = 85.1 bits (209), Expect = 2e-16
Identities = 44/78 (56%), Positives = 57/78 (72%)
Frame = -3
Query: 439 EGHSNKEILEYKKPAKQAYDDQLKRIAEMVESKLRDATLRLEQPLAKEPAARLKAEENAN 260
+G+SN EI E+KK +YD QL RI EMVE+KLRD RLEQ L +E AARL+AE+ AN
Sbjct: 198 QGYSNNEIDEFKKQIDMSYDRQLSRITEMVETKLRDTAKRLEQQLGEEQAARLEAEKRAN 257
Query: 259 LARVRSDKEIRELRKHLE 206
+ RS EI++LR++LE
Sbjct: 258 EVQKRSSDEIKKLRENLE 275
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 338,214,452
Number of Sequences: 1393205
Number of extensions: 6307738
Number of successful extensions: 19024
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 18382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18927
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 6689237688
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
