Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012559A_C01 KMC012559A_c01
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O49046|ARGI_SOYBN Arginase gi|7488699|pir||T06222 probable ar... 147 5e-54
ref|NP_192629.1| arginase; protein id: At4g08900.1, supported by... 159 7e-50
ref|NP_192626.1| putative arginase; protein id: At4g08870.1, sup... 156 3e-49
gb|AAM64858.1| putative arginase [Arabidopsis thaliana] 155 6e-49
gb|AAK15006.1| arginase [Brassica napus] 154 1e-48
>sp|O49046|ARGI_SOYBN Arginase gi|7488699|pir||T06222 probable arginase (EC 3.5.3.1) -
soybean gi|2661128|gb|AAC04613.1| arginase [Glycine max]
Length = 350
Score = 147 bits (370), Expect(3) = 5e-54
Identities = 67/92 (72%), Positives = 80/92 (86%)
Frame = +3
Query: 312 KGLAFAPPHIREAIWCGSTNSTTEEGKDLRDPRVLASVGDLAVQEIRECGVDDHRLMNVV 491
+G AFAPP IRE IWCGS NSTTEEGKDL+D R++ VGD+ +QE+R+CG+ D RLM VV
Sbjct: 88 EGPAFAPPFIREGIWCGSANSTTEEGKDLKDLRIMVDVGDIPIQEMRDCGIGDERLMKVV 147
Query: 492 SDAVKLVMEEDPLRPLVLGGDHSITYPIVRAI 587
SD+VKLVMEEDPLRPL+LGGD SI+YP+VRAI
Sbjct: 148 SDSVKLVMEEDPLRPLILGGDPSISYPVVRAI 179
Score = 55.1 bits (131), Expect(3) = 5e-54
Identities = 27/56 (48%), Positives = 37/56 (65%)
Frame = +1
Query: 79 KGMSTIARRGIHYMQEIQAAKVSPASLEQGQKGVIEASLALIRENAKAQGRTCACL 246
K +S + RRGIH MQ++ A K+SP SLE+ Q VI+A+L L+REN + C L
Sbjct: 11 KDISKVGRRGIHCMQKLCAEKISPDSLEKAQNRVIDAALTLVRENTGLRKNLCHSL 66
Score = 52.0 bits (123), Expect(3) = 5e-54
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 221 LKGELVRAYGGAVATSSLLGVPLGHNSSFLQGP 319
L+ L + GGAVATS+LLGVPLGHNSSFL+GP
Sbjct: 58 LRKNLCHSLGGAVATSTLLGVPLGHNSSFLEGP 90
>ref|NP_192629.1| arginase; protein id: At4g08900.1, supported by cDNA: gi_15450350,
supported by cDNA: gi_16974474, supported by cDNA:
gi_602421 [Arabidopsis thaliana]
gi|1168493|sp|P46637|ARG1_ARATH Arginase
gi|25407461|pir||F85089 arginase [imported] -
Arabidopsis thaliana gi|602422|gb|AAA85816.1| arginase
gi|4325373|gb|AAD17369.1| Arabidopsis thaliana arginase
(SW:P46637) (Pfam: PF00491, Score=419.6, E=3.7e-142 N=1)
gi|7267532|emb|CAB78014.1| arginase [Arabidopsis
thaliana] gi|15450351|gb|AAK96469.1| AT4g08900/T3H13_7
[Arabidopsis thaliana] gi|16974475|gb|AAL31241.1|
AT4g08900/T3H13_7 [Arabidopsis thaliana]
Length = 342
Score = 159 bits (401), Expect(2) = 7e-50
Identities = 73/92 (79%), Positives = 85/92 (92%)
Frame = +3
Query: 312 KGLAFAPPHIREAIWCGSTNSTTEEGKDLRDPRVLASVGDLAVQEIRECGVDDHRLMNVV 491
+G AFAPP IREAIWCGSTNS TEEGK+L+DPRVL VGD+ VQEIR+CGVDD RLMNV+
Sbjct: 80 QGPAFAPPRIREAIWCGSTNSATEEGKELKDPRVLTDVGDVPVQEIRDCGVDDDRLMNVI 139
Query: 492 SDAVKLVMEEDPLRPLVLGGDHSITYPIVRAI 587
S++VKLVMEE+PLRPLVLGGDHSI+YP+VRA+
Sbjct: 140 SESVKLVMEEEPLRPLVLGGDHSISYPVVRAV 171
Score = 60.5 bits (145), Expect(2) = 7e-50
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +2
Query: 200 LFEKMQRLKGELVRAYGGAVATSSLLGVPLGHNSSFLQGP 319
L + +LKGELVR GGA A++SLLGVPLGHNSSFLQGP
Sbjct: 43 LIRERAKLKGELVRLLGGAKASTSLLGVPLGHNSSFLQGP 82
Score = 46.6 bits (109), Expect = 2e-04
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 94 IARRGIHYMQEIQAAK---VSPASLEQGQKGVIEASLALIRENAKAQGRTCACLWRRRSN 264
I R+GI+Y+ + +A VS +S+E+GQ VI+ASL LIRE AK +G L +++
Sbjct: 5 IGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGGAKAS 64
Query: 265 FISFGSSFG 291
G G
Sbjct: 65 TSLLGVPLG 73
>ref|NP_192626.1| putative arginase; protein id: At4g08870.1, supported by cDNA:
33985. [Arabidopsis thaliana]
gi|11131457|sp|Q9ZPF5|ARG2_ARATH Probable arginase
gi|25407458|pir||C85089 probable arginase [imported] -
Arabidopsis thaliana gi|4325375|gb|AAD17371.1| similar
to arginases (Pfam: PF00491, Score=353.2, E=1.4e-119,
N=1) [Arabidopsis thaliana] gi|7267529|emb|CAB78011.1|
putative arginase [Arabidopsis thaliana]
gi|28392862|gb|AAO41868.1| unknown protein [Arabidopsis
thaliana]
Length = 344
Score = 156 bits (395), Expect(2) = 3e-49
Identities = 72/92 (78%), Positives = 85/92 (92%)
Frame = +3
Query: 312 KGLAFAPPHIREAIWCGSTNSTTEEGKDLRDPRVLASVGDLAVQEIRECGVDDHRLMNVV 491
+G A APPH+REAIWCGSTNSTTEEGK+L+DPRVL+ VGD+ VQEIRE GVDD RLM VV
Sbjct: 82 EGPALAPPHVREAIWCGSTNSTTEEGKELKDPRVLSDVGDIPVQEIREMGVDDDRLMKVV 141
Query: 492 SDAVKLVMEEDPLRPLVLGGDHSITYPIVRAI 587
S++VKLVMEE+PLRPLV+GGDHSI+YP+VRA+
Sbjct: 142 SESVKLVMEEEPLRPLVIGGDHSISYPVVRAV 173
Score = 60.5 bits (145), Expect(2) = 3e-49
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 200 LFEKMQRLKGELVRAYGGAVATSSLLGVPLGHNSSFLQGPGI 325
L + +LKGELVR GGA AT++LLGVPLGHNSSFL+GP +
Sbjct: 45 LIRERAKLKGELVRLIGGAKATTALLGVPLGHNSSFLEGPAL 86
Score = 39.7 bits (91), Expect = 0.028
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +1
Query: 85 MSTIARRGIHYMQEIQAAKVS-----PASL-EQGQKGVIEASLALIRENAKAQG 228
M I +RG+ Y Q + AA + P SL E GQ VI+ASL LIRE AK +G
Sbjct: 1 MWKIGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKG 54
>gb|AAM64858.1| putative arginase [Arabidopsis thaliana]
Length = 344
Score = 155 bits (393), Expect(2) = 6e-49
Identities = 72/92 (78%), Positives = 85/92 (92%)
Frame = +3
Query: 312 KGLAFAPPHIREAIWCGSTNSTTEEGKDLRDPRVLASVGDLAVQEIRECGVDDHRLMNVV 491
+G A AP H+REAIWCGSTNSTTEEGK+L+DPRVL+ VGD+ VQEIRE GVDD RLMNVV
Sbjct: 82 EGPALAPTHVREAIWCGSTNSTTEEGKELKDPRVLSDVGDIPVQEIREMGVDDDRLMNVV 141
Query: 492 SDAVKLVMEEDPLRPLVLGGDHSITYPIVRAI 587
S++VKLVMEE+PLRPLV+GGDHSI+YP+VRA+
Sbjct: 142 SESVKLVMEEEPLRPLVIGGDHSISYPVVRAV 173
Score = 60.5 bits (145), Expect(2) = 6e-49
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 200 LFEKMQRLKGELVRAYGGAVATSSLLGVPLGHNSSFLQGPGI 325
L + +LKGELVR GGA AT++LLGVPLGHNSSFL+GP +
Sbjct: 45 LIRERAKLKGELVRLIGGAKATTALLGVPLGHNSSFLEGPAL 86
Score = 39.7 bits (91), Expect = 0.028
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +1
Query: 85 MSTIARRGIHYMQEIQAAKVS-----PASL-EQGQKGVIEASLALIRENAKAQG 228
M I +RG+ Y Q + AA + P SL E GQ VI+ASL LIRE AK +G
Sbjct: 1 MWKIGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKG 54
>gb|AAK15006.1| arginase [Brassica napus]
Length = 334
Score = 154 bits (390), Expect(2) = 1e-48
Identities = 72/92 (78%), Positives = 83/92 (89%)
Frame = +3
Query: 312 KGLAFAPPHIREAIWCGSTNSTTEEGKDLRDPRVLASVGDLAVQEIRECGVDDHRLMNVV 491
+G AFAPP IREAIWCGSTNS TEEGK+L+DPRVL VGD+ VQEI +CGVDD RLMNV+
Sbjct: 80 QGPAFAPPRIREAIWCGSTNSATEEGKELKDPRVLTDVGDVPVQEIIDCGVDDDRLMNVI 139
Query: 492 SDAVKLVMEEDPLRPLVLGGDHSITYPIVRAI 587
S++VKLVMEE PLRPLVLGGDHSI+YP+VRA+
Sbjct: 140 SESVKLVMEEKPLRPLVLGGDHSISYPVVRAV 171
Score = 60.5 bits (145), Expect(2) = 1e-48
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +2
Query: 200 LFEKMQRLKGELVRAYGGAVATSSLLGVPLGHNSSFLQGP 319
L + +LKGELVR GGA A++SLLGVPLGHNSSFLQGP
Sbjct: 43 LIRERAKLKGELVRLLGGAKASTSLLGVPLGHNSSFLQGP 82
Score = 46.6 bits (109), Expect = 2e-04
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 94 IARRGIHYMQEIQAAK---VSPASLEQGQKGVIEASLALIRENAKAQGRTCACLWRRRSN 264
I R+GI+Y+ + +A VS +S+E+GQ VI+ASL LIRE AK +G L +++
Sbjct: 5 IGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGGAKAS 64
Query: 265 FISFGSSFG 291
G G
Sbjct: 65 TSLLGVPLG 73
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,411,041
Number of Sequences: 1393205
Number of extensions: 10591035
Number of successful extensions: 26510
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 25702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26496
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
