Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012488A_C01 KMC012488A_c01
(533 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180436.1| legumin-like protein; protein id: At2g28680.1 [... 248 3e-65
ref|NP_172255.1| globulin-like protein; protein id: At1g07750.1,... 246 2e-64
gb|AAM65577.1| globulin-like protein [Arabidopsis thaliana] 245 2e-64
gb|AAO63266.1| legumin-like protein [Zea mays] 203 9e-52
dbj|BAB63836.1| putative legumin-like protein [Oryza sativa (jap... 201 5e-51
>ref|NP_180436.1| legumin-like protein; protein id: At2g28680.1 [Arabidopsis
thaliana] gi|25408007|pir||H84687 legumin-like protein
[imported] - Arabidopsis thaliana
gi|4580389|gb|AAD24367.1| legumin-like protein
[Arabidopsis thaliana]
Length = 356
Score = 248 bits (633), Expect = 3e-65
Identities = 117/151 (77%), Positives = 129/151 (84%)
Frame = -3
Query: 456 MAMIFLPNWPRSLTAGEGGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSSKV 277
M + P P+ + G+GGSY AW P ELPMLR+GNIGASKLAL+K G ALPRYSDS KV
Sbjct: 1 MELDLSPRLPKKVYGGDGGSYFAWCPEELPMLRDGNIGASKLALEKYGLALPRYSDSPKV 60
Query: 276 AYVLQGTGVVGIVLPESEEKVVAIKKGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAH 97
AYVLQG G GIVLPE EEKV+AIKKGD++ALPFGVVTWW+N EDTELVVLFLG+T K H
Sbjct: 61 AYVLQGAGTAGIVLPEKEEKVIAIKKGDSIALPFGVVTWWFNNEDTELVVLFLGETHKGH 120
Query: 96 KAGEFTDFYLTGSNGIFTGFSTEFVGRAWDL 4
KAG+FTDFYLTGSNGIFTGFSTEFVGRAWDL
Sbjct: 121 KAGQFTDFYLTGSNGIFTGFSTEFVGRAWDL 151
>ref|NP_172255.1| globulin-like protein; protein id: At1g07750.1, supported by cDNA:
40551., supported by cDNA: gi_12248028, supported by
cDNA: gi_15294233 [Arabidopsis thaliana]
gi|25407006|pir||A86213 hypothetical protein [imported]
- Arabidopsis thaliana
gi|8439891|gb|AAF75077.1|AC007583_13 Contains similarity
to 12S seed storage globulin precursor gi|134919. ESTs
gb|T13642, gb|T21684 and gb|T22751 come from this gene.
[Arabidopsis thaliana]
gi|12248029|gb|AAG50106.1|AF334728_1 putative globulin
protein [Arabidopsis thaliana]
gi|15294234|gb|AAK95294.1|AF410308_1 At1g07750/F24B9_13
[Arabidopsis thaliana] gi|24111337|gb|AAN46792.1|
At1g07750/F24B9_13 [Arabidopsis thaliana]
Length = 356
Score = 246 bits (627), Expect = 2e-64
Identities = 112/151 (74%), Positives = 132/151 (87%)
Frame = -3
Query: 456 MAMIFLPNWPRSLTAGEGGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSSKV 277
M + P P+ + G+GGSY AW P ELPML++GNIGA+KLAL+KNGFA+PRYSDSSKV
Sbjct: 1 MELDLTPKLPKKVYGGDGGSYSAWCPEELPMLKQGNIGAAKLALEKNGFAVPRYSDSSKV 60
Query: 276 AYVLQGTGVVGIVLPESEEKVVAIKKGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAH 97
AYVLQG+G GIVLPE EEKV+AIK+GD++ALPFGVVTWW+N ED ELV+LFLG+T K H
Sbjct: 61 AYVLQGSGTAGIVLPEKEEKVIAIKQGDSIALPFGVVTWWFNNEDPELVILFLGETHKGH 120
Query: 96 KAGEFTDFYLTGSNGIFTGFSTEFVGRAWDL 4
KAG+FT+FYLTG+NGIFTGFSTEFVGRAWDL
Sbjct: 121 KAGQFTEFYLTGTNGIFTGFSTEFVGRAWDL 151
>gb|AAM65577.1| globulin-like protein [Arabidopsis thaliana]
Length = 356
Score = 245 bits (626), Expect = 2e-64
Identities = 111/151 (73%), Positives = 132/151 (86%)
Frame = -3
Query: 456 MAMIFLPNWPRSLTAGEGGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSSKV 277
M + P P+ + G+GGSY AW P ELPML++GNIGA+KLAL+KNGFA+PRYSDSSKV
Sbjct: 1 MELDLTPKLPKKVYGGDGGSYSAWCPEELPMLKQGNIGAAKLALEKNGFAVPRYSDSSKV 60
Query: 276 AYVLQGTGVVGIVLPESEEKVVAIKKGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAH 97
AYVLQG+G GIVLPE EEKV+A+K+GD++ALPFGVVTWW+N ED ELV+LFLG+T K H
Sbjct: 61 AYVLQGSGTAGIVLPEKEEKVIAVKQGDSIALPFGVVTWWFNNEDPELVILFLGETHKGH 120
Query: 96 KAGEFTDFYLTGSNGIFTGFSTEFVGRAWDL 4
KAG+FT+FYLTG+NGIFTGFSTEFVGRAWDL
Sbjct: 121 KAGQFTEFYLTGTNGIFTGFSTEFVGRAWDL 151
>gb|AAO63266.1| legumin-like protein [Zea mays]
Length = 360
Score = 203 bits (517), Expect = 9e-52
Identities = 100/148 (67%), Positives = 118/148 (79%), Gaps = 3/148 (2%)
Frame = -3
Query: 438 PNWPRSLTAGEGGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSSKVAYVLQG 259
P PR G+GG+Y+ WSP++LPML +IGA+KL+L G ALP YSDS+KVAYVLQG
Sbjct: 8 PKQPRKAYGGDGGAYYEWSPADLPMLGVASIGAAKLSLAAGGLALPSYSDSAKVAYVLQG 67
Query: 258 TGVVGIVLPE-SEEKVVAIKKGDALALPFGVVTWWYN--KEDTELVVLFLGDTSKAHKAG 88
TG GIVLPE ++EKVVA+K+GDALALPFGVVTWW+N T L VLFLGDTSK H+ G
Sbjct: 68 TGTCGIVLPEATKEKVVAVKEGDALALPFGVVTWWHNGPAAPTPLTVLFLGDTSKGHRPG 127
Query: 87 EFTDFYLTGSNGIFTGFSTEFVGRAWDL 4
+FT+F LTG+ GIFTGFSTEFV RAWDL
Sbjct: 128 QFTNFQLTGATGIFTGFSTEFVSRAWDL 155
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/61 (27%), Positives = 34/61 (54%), Gaps = 2/61 (3%)
Frame = -3
Query: 405 GGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSS--KVAYVLQGTGVVGIVLP 232
GG + + LP+++E +GA + + + P +S S +V Y+++G+G V +V P
Sbjct: 207 GGRVVVLNTANLPLVKEVGLGADLVRIDAHSMCSPGFSCDSAYQVTYIVRGSGRVQVVGP 266
Query: 231 E 229
+
Sbjct: 267 D 267
>dbj|BAB63836.1| putative legumin-like protein [Oryza sativa (japonica
cultivar-group)] gi|28564708|dbj|BAC57623.1| putative
legumin-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 377
Score = 201 bits (511), Expect = 5e-51
Identities = 103/156 (66%), Positives = 116/156 (74%), Gaps = 3/156 (1%)
Frame = -3
Query: 462 KTMAMIFLPNWPRSLTAGEGGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSS 283
+ M M P P GEGGSY WSPSELPMLR +IGA+KL+L G ALP YSDS+
Sbjct: 14 EAMVMDLSPKRPAKSYGGEGGSYFDWSPSELPMLRAASIGAAKLSLAAGGLALPFYSDSA 73
Query: 282 KVAYVLQGTGVVGIVLPES-EEKVVAIKKGDALALPFGVVTWWYN--KEDTELVVLFLGD 112
KVAYVLQG G ++LPE+ EK++ IK+GDALALPFGVVTWW+N TELVVLFLGD
Sbjct: 74 KVAYVLQGKGTCAVLLPETPSEKILPIKEGDALALPFGVVTWWHNLHAATTELVVLFLGD 133
Query: 111 TSKAHKAGEFTDFYLTGSNGIFTGFSTEFVGRAWDL 4
TSK H AG FT+ LTGS GIFTGFSTEFV RAWDL
Sbjct: 134 TSKGHTAGRFTNMQLTGSTGIFTGFSTEFVARAWDL 169
Score = 31.6 bits (70), Expect = 6.2
Identities = 17/66 (25%), Positives = 33/66 (49%), Gaps = 2/66 (3%)
Frame = -3
Query: 429 PRSLTAGEGGSYHAWSPSELPMLREGNIGASKLALQKNGFALPRYSDSS--KVAYVLQGT 256
P + GG + LP+++E +GA + + + P +S S +V Y+++G+
Sbjct: 214 PLDVDIKNGGRVVVLNTQNLPLVKEVGLGADLVRIDGHSMCSPGFSCDSAYQVTYIVRGS 273
Query: 255 GVVGIV 238
G V +V
Sbjct: 274 GRVQVV 279
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,887,532
Number of Sequences: 1393205
Number of extensions: 10866643
Number of successful extensions: 36215
Number of sequences better than 10.0: 254
Number of HSP's better than 10.0 without gapping: 34401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36065
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
