Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012385A_C01 KMC012385A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S24602 cysteine proteinase tpp (EC 3.4.22.-) - garden pea g... 223 9e-58
pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidn... 220 8e-57
gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease... 197 5e-50
gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea bat... 193 1e-48
emb|CAB53515.1| cysteine protease [Solanum tuberosum] 190 8e-48
>pir||S24602 cysteine proteinase tpp (EC 3.4.22.-) - garden pea
gi|3980198|emb|CAA46863.1| thiolprotease [Pisum sativum]
Length = 464
Score = 223 bits (569), Expect = 9e-58
Identities = 112/172 (65%), Positives = 138/172 (80%), Gaps = 3/172 (1%)
Frame = +2
Query: 41 LVVVITVSSAMDMSIISYSR---DKSAPPLRSDEEVMRMYEEWAMKQGKVYNALGEKEKR 211
+ + T+S A+DM IISY + DKS P R++++V+ MYEEW +K GK YNALGEKEKR
Sbjct: 10 ITLTFTLSLALDMCIISYDKTHPDKSTP--RTNDQVLTMYEEWLVKHGKNYNALGEKEKR 67
Query: 212 FEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRAKFLGIRVDSNRRRRRMAKSTTS 391
FEIFKDNL FIDEHN++N ++++GLNRFADL+NEEYR +FLG R++ NRR R++ T
Sbjct: 68 FEIFKDNLGFIDEHNSKNLSFRLGLNRFADLTNEEYRTRFLGTRINPNRRNRKVNSQT-- 125
Query: 392 NHRYAPRVGDGEKLPESVDWRKEGAVVGVKDQGECGSAWAFSAVAAGEGINK 547
+RYA RVGD KLPESVDWRKEGAVVGVKDQG CGS WAFSA+AA EG+NK
Sbjct: 126 -NRYATRVGD--KLPESVDWRKEGAVVGVKDQGSCGSCWAFSAIAAVEGVNK 174
>pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidney bean
gi|2511693|emb|CAB17076.1| cysteine proteinase precursor
[Phaseolus vulgaris]
Length = 455
Score = 220 bits (561), Expect = 8e-57
Identities = 113/173 (65%), Positives = 137/173 (78%), Gaps = 3/173 (1%)
Frame = +2
Query: 38 VLVVVITVSSAMDMSIISYS---RDKSAPPLRSDEEVMRMYEEWAMKQGKVYNALGEKEK 208
+L + +SSA+DMSIISY +DK+ R+DEEV +YEEW +K GK+YNALGEK+K
Sbjct: 2 LLFALFALSSALDMSIISYDNAHQDKAT--WRTDEEVNSLYEEWLVKHGKLYNALGEKDK 59
Query: 209 RFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRAKFLGIRVDSNRRRRRMAKSTT 388
RF+IFKDNL+FID+ NAENRTYK+GLNRFADL+NEEYRA++LG ++D NRR R T
Sbjct: 60 RFQIFKDNLRFIDQQNAENRTYKLGLNRFADLTNEEYRARYLGTKIDPNRRLGR-----T 114
Query: 389 SNHRYAPRVGDGEKLPESVDWRKEGAVVGVKDQGECGSAWAFSAVAAGEGINK 547
++RYAPRV GE LP+SVDWRKEGAVV VKDQ CGS WAFSA+ A EGINK
Sbjct: 115 PSNRYAPRV--GETLPDSVDWRKEGAVVPVKDQASCGSCWAFSAIGAVEGINK 165
>gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
Length = 485
Score = 197 bits (502), Expect = 5e-50
Identities = 99/170 (58%), Positives = 124/170 (72%)
Frame = +2
Query: 38 VLVVVITVSSAMDMSIISYSRDKSAPPLRSDEEVMRMYEEWAMKQGKVYNALGEKEKRFE 217
+ + +I VSSAMDMSIISY ++ RSD EV R+YEEW +K GK N+L EK++RFE
Sbjct: 11 LFLTMIVVSSAMDMSIISYDKNHHTVSSRSDAEVSRLYEEWLVKHGKAQNSLTEKDRRFE 70
Query: 218 IFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRAKFLGIRVDSNRRRRRMAKSTTSNH 397
IFKDNL+FIDEHN +N +Y++GL +FADL+N+EYR+ +LG R+ K+T S+
Sbjct: 71 IFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLGSRL--------KRKATKSSL 122
Query: 398 RYAPRVGDGEKLPESVDWRKEGAVVGVKDQGECGSAWAFSAVAAGEGINK 547
RY RVGD +PESVDWRKEGAV VKDQG CGS WAFS + A EGINK
Sbjct: 123 RYEVRVGDA--IPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINK 170
>gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea batatas]
Length = 462
Score = 193 bits (490), Expect = 1e-48
Identities = 102/173 (58%), Positives = 131/173 (74%), Gaps = 3/173 (1%)
Frame = +2
Query: 38 VLVVVITVSSAMDMSIISYSRDKSAPPL-RSDEEVMRMYEEWAMKQGKVYNALG-EKEKR 211
VL V + S++ DMSII+Y + A L RSDEEVM +YE W ++ GK YN LG EK+KR
Sbjct: 11 VLAAVSSASASADMSIITYDEEHPAKGLSRSDEEVMALYESWLVEHGKSYNGLGGEKDKR 70
Query: 212 FEIFKDNLKFIDEHNAE-NRTYKVGLNRFADLSNEEYRAKFLGIRVDSNRRRRRMAKSTT 388
FEIFKDNL++IDE N+ +R+YK+GLNRFADL+NEEYR+ +LG + D+ RRR+AK T
Sbjct: 71 FEIFKDNLRYIDEQNSRGDRSYKLGLNRFADLTNEEYRSTYLGAKTDA---RRRIAK-TK 126
Query: 389 SNHRYAPRVGDGEKLPESVDWRKEGAVVGVKDQGECGSAWAFSAVAAGEGINK 547
S+ RYAP+ G LP+S+DWR++GAV VKDQG CGS WAFS +AA EGIN+
Sbjct: 127 SDRRYAPKAGGS--LPDSIDWREKGAVAEVKDQGSCGSCWAFSTIAAVEGINQ 177
>emb|CAB53515.1| cysteine protease [Solanum tuberosum]
Length = 466
Score = 190 bits (483), Expect = 8e-48
Identities = 102/175 (58%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Frame = +2
Query: 26 TITTVLVVVI-TVSSAMDMSIISYSRDKSAPPLRSDEEVMRMYEEWAMKQGKVYNALGEK 202
TI+ +L+++ T+SSA DMSIISY D++ RSD+EV +YE W ++ GK YNALGEK
Sbjct: 9 TISLLLMLIFSTLSSASDMSIISY--DETHIHHRSDDEVSALYESWLIEHGKSYNALGEK 66
Query: 203 EKRFEIFKDNLKFIDEHNA-ENRTYKVGLNRFADLSNEEYRAKFLGIRVDSNRRRRRMAK 379
+KRF+IFKDNLK+IDE N+ N++YK+GL +FADL+NEEYR+ +LG + +RR+ K
Sbjct: 67 DKRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYLGTKSSGDRRKLSKNK 126
Query: 380 STTSNHRYAPRVGDGEKLPESVDWRKEGAVVGVKDQGECGSAWAFSAVAAGEGIN 544
S RY P+VGD LPESVDWR +G +VGVKDQG CGS WAFSAVAA E IN
Sbjct: 127 S----DRYLPKVGD--SLPESVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESIN 175
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,102,698
Number of Sequences: 1393205
Number of extensions: 13102595
Number of successful extensions: 64444
Number of sequences better than 10.0: 995
Number of HSP's better than 10.0 without gapping: 57293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63127
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
