Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012302A_C01 KMC012302A_c01
(608 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72543.1| protein tyrosine phosphatase-like protein [Oryza ... 114 8e-25
ref|NP_190048.1| protein-tyrosine-phosphatase-like protein; prot... 105 4e-22
ref|NP_682600.1| low molecular weight phosphotyrosine protein [T... 82 7e-15
ref|NP_489108.1| protein-tyrosine-phosphatase [Nostoc sp. PCC 71... 73 3e-12
ref|NP_441960.1| low molecular weight phosphotyrosine protein ph... 72 6e-12
>gb|AAO72543.1| protein tyrosine phosphatase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 268
Score = 114 bits (286), Expect = 8e-25
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = -3
Query: 603 AFNRWRFRQTLPEDAHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACDSLL 424
+F RWR R+ LP+ KKVKLMCSYCK+H E+EVPDPYYGG QGFEKVLDLLEDAC+SLL
Sbjct: 197 SFERWRHREPLPDSGPKKVKLMCSYCKRHTESEVPDPYYGGPQGFEKVLDLLEDACESLL 256
Query: 423 ENILAENKHI 394
++I+AEN +
Sbjct: 257 DSIVAENASV 266
>ref|NP_190048.1| protein-tyrosine-phosphatase-like protein; protein id: At3g44620.1
[Arabidopsis thaliana] gi|11263033|pir||T47437
protein-tyrosine-phosphatase-like protein - Arabidopsis
thaliana gi|6967110|emb|CAB72464.1|
protein-tyrosine-phosphatase-like protein [Arabidopsis
thaliana]
Length = 177
Score = 105 bits (263), Expect = 4e-22
Identities = 47/68 (69%), Positives = 57/68 (83%)
Frame = -3
Query: 606 EAFNRWRFRQTLPEDAHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACDSL 427
+A+N W+ R P DA KKVKLMCSYCKKH++ VPDPYYGG QGFEKVLDLLEDAC+SL
Sbjct: 110 KAYNVWKARGNFPPDADKKVKLMCSYCKKHNDKFVPDPYYGGAQGFEKVLDLLEDACESL 169
Query: 426 LENILAEN 403
L++I A++
Sbjct: 170 LDSITAQS 177
>ref|NP_682600.1| low molecular weight phosphotyrosine protein [Thermosynechococcus
elongatus BP-1] gi|22295536|dbj|BAC09362.1| low
molecular weight phosphotyrosine protein
[Thermosynechococcus elongatus BP-1]
Length = 164
Score = 81.6 bits (200), Expect = 7e-15
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = -3
Query: 552 KVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACDSLLENILAENKHIQE 388
KV+LMC +C+ HD EVPDPYYGG+QGFEKVLDLL DAC+ LLE + A ++E
Sbjct: 108 KVRLMCDFCRHHDAKEVPDPYYGGRQGFEKVLDLLTDACEGLLEYLKANYPQLEE 162
>ref|NP_489108.1| protein-tyrosine-phosphatase [Nostoc sp. PCC 7120]
gi|25289044|pir||AD2439 protein-tyrosine-phosphatase
[imported] - Nostoc sp. (strain PCC 7120)
gi|17134206|dbj|BAB76767.1| protein-tyrosine-phosphatase
[Nostoc sp. PCC 7120]
Length = 161
Score = 73.2 bits (178), Expect = 3e-12
Identities = 29/51 (56%), Positives = 40/51 (77%)
Frame = -3
Query: 558 HKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACDSLLENILAE 406
H KV LMC +C +H+ EVPDPYYGG +GF +V+DLL DAC+ LL++I ++
Sbjct: 107 HNKVTLMCEFCSRHNLKEVPDPYYGGTEGFNQVIDLLVDACEGLLQHITSQ 157
>ref|NP_441960.1| low molecular weight phosphotyrosine protein phosphatase
[Synechocystis sp. PCC 6803]
gi|2499551|sp|Q55535|Y328_SYNY3 Putative low molecular
weight protein-tyrosine-phosphatase slr0328
gi|7435145|pir||S76052 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
gi|1001408|dbj|BAA10030.1| low molecular weight
phosphotyrosine protein phosphatase [Synechocystis sp.
PCC 6803]
Length = 157
Score = 72.0 bits (175), Expect = 6e-12
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = -3
Query: 585 FRQTLPEDA----HKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACDSLLEN 418
+R L +D H KVK++C Y +K + EVPDPYYGGQ GFE V+DLLEDAC +LL +
Sbjct: 91 YRNILAQDPAGQYHHKVKMICDYTEKFGDREVPDPYYGGQAGFEHVIDLLEDACGNLLTS 150
Query: 417 I 415
+
Sbjct: 151 L 151
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 495,809,717
Number of Sequences: 1393205
Number of extensions: 10206904
Number of successful extensions: 37500
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 36492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37479
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
