Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012292A_C01 KMC012292A_c01
(565 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565777.1| expressed protein; protein id: At2g34040.1, sup... 296 9e-80
pir||F84751 hypothetical protein At2g34040 [imported] - Arabidop... 296 9e-80
dbj|BAC42863.1| unknown protein [Arabidopsis thaliana] gi|289733... 290 8e-78
gb|AAF24538.2|AC007508_1 F1K23.1 [Arabidopsis thaliana] 240 1e-62
ref|NP_174198.1| hypothetical protein; protein id: At1g29030.1 [... 240 1e-62
>ref|NP_565777.1| expressed protein; protein id: At2g34040.1, supported by cDNA:
13928. [Arabidopsis thaliana] gi|20196906|gb|AAB67622.2|
expressed protein [Arabidopsis thaliana]
gi|21553359|gb|AAM62452.1| unknown [Arabidopsis
thaliana] gi|25083323|gb|AAN72062.1| expressed protein
[Arabidopsis thaliana]
Length = 553
Score = 296 bits (759), Expect = 9e-80
Identities = 144/187 (77%), Positives = 166/187 (88%)
Frame = -1
Query: 562 IIEGQADLDAQFNVSDADHIERLISCLHLALPILVKGASSSKFLSYINKYIIPVFDQLPG 383
IIEGQADL+AQF SD DHI+RLISCL LALP +GA SS+FL Y+NK+IIPVFD+LP
Sbjct: 233 IIEGQADLNAQFEFSDTDHIDRLISCLQLALPFFARGAPSSRFLIYLNKHIIPVFDKLPE 292
Query: 382 ERKVDLLRSLAEFSPYTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYAFHH 203
ERK+DLL++LA+ SPYTT Q++RQ+LPSIV+LLK YM +KTGEEMNFTYVECLLYAFHH
Sbjct: 293 ERKLDLLKALADISPYTTAQEARQLLPSIVELLKIYMPARKTGEEMNFTYVECLLYAFHH 352
Query: 202 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYKDFTERLNNVEEFTRATIKKLTQGMA 23
LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSE KDFTERL VE+ T+AT+KKLTQGM
Sbjct: 353 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSELNKDFTERLTIVEDLTKATMKKLTQGMT 412
Query: 22 ENNKSMA 2
E+NK+M+
Sbjct: 413 EHNKAMS 419
>pir||F84751 hypothetical protein At2g34040 [imported] - Arabidopsis thaliana
Length = 487
Score = 296 bits (759), Expect = 9e-80
Identities = 144/187 (77%), Positives = 166/187 (88%)
Frame = -1
Query: 562 IIEGQADLDAQFNVSDADHIERLISCLHLALPILVKGASSSKFLSYINKYIIPVFDQLPG 383
IIEGQADL+AQF SD DHI+RLISCL LALP +GA SS+FL Y+NK+IIPVFD+LP
Sbjct: 211 IIEGQADLNAQFEFSDTDHIDRLISCLQLALPFFARGAPSSRFLIYLNKHIIPVFDKLPE 270
Query: 382 ERKVDLLRSLAEFSPYTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYAFHH 203
ERK+DLL++LA+ SPYTT Q++RQ+LPSIV+LLK YM +KTGEEMNFTYVECLLYAFHH
Sbjct: 271 ERKLDLLKALADISPYTTAQEARQLLPSIVELLKIYMPARKTGEEMNFTYVECLLYAFHH 330
Query: 202 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYKDFTERLNNVEEFTRATIKKLTQGMA 23
LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSE KDFTERL VE+ T+AT+KKLTQGM
Sbjct: 331 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSELNKDFTERLTIVEDLTKATMKKLTQGMT 390
Query: 22 ENNKSMA 2
E+NK+M+
Sbjct: 391 EHNKAMS 397
>dbj|BAC42863.1| unknown protein [Arabidopsis thaliana] gi|28973375|gb|AAO64012.1|
unknown protein [Arabidopsis thaliana]
Length = 556
Score = 290 bits (742), Expect = 8e-78
Identities = 140/187 (74%), Positives = 163/187 (86%)
Frame = -1
Query: 562 IIEGQADLDAQFNVSDADHIERLISCLHLALPILVKGASSSKFLSYINKYIIPVFDQLPG 383
IIEGQADLD++FNVSD DHI+R ISCL ALP +GA SKFL+Y+NK I+P FDQLP
Sbjct: 233 IIEGQADLDSEFNVSDTDHIDRFISCLQTALPFFARGAPGSKFLNYLNKNIMPAFDQLPE 292
Query: 382 ERKVDLLRSLAEFSPYTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYAFHH 203
ERK++LLR+LAE SPYTT Q +RQ+LPSIVQLLKKYM +KTGEEMNFTYVECLLY HH
Sbjct: 293 ERKLNLLRALAEMSPYTTAQVARQILPSIVQLLKKYMPARKTGEEMNFTYVECLLYVLHH 352
Query: 202 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYKDFTERLNNVEEFTRATIKKLTQGMA 23
LAHK PNATNSLCGYKIVTGQPSDRLGEDFSE K+FTERL +VE+ T+AT+KKLTQGM+
Sbjct: 353 LAHKAPNATNSLCGYKIVTGQPSDRLGEDFSEFNKEFTERLTSVEDLTKATMKKLTQGMS 412
Query: 22 ENNKSMA 2
E++K+M+
Sbjct: 413 EHSKAMS 419
>gb|AAF24538.2|AC007508_1 F1K23.1 [Arabidopsis thaliana]
Length = 347
Score = 240 bits (612), Expect = 1e-62
Identities = 124/187 (66%), Positives = 146/187 (77%)
Frame = -1
Query: 562 IIEGQADLDAQFNVSDADHIERLISCLHLALPILVKGASSSKFLSYINKYIIPVFDQLPG 383
IIEGQADLD++FN +GA SKFL+Y+NK I+P FDQ
Sbjct: 49 IIEGQADLDSEFN----------------------RGAPGSKFLNYLNKNIMPAFDQ--- 83
Query: 382 ERKVDLLRSLAEFSPYTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYAFHH 203
ERK++LLR+LAE SPYTT Q +RQ+LPSIVQLLKKYM +KTGEEMNFTYVECLLY HH
Sbjct: 84 ERKLNLLRALAEMSPYTTAQVARQILPSIVQLLKKYMPARKTGEEMNFTYVECLLYVLHH 143
Query: 202 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYKDFTERLNNVEEFTRATIKKLTQGMA 23
LAHK PNATNSLCGYKIVTGQPSDRLGEDFSE K+FTERL +VE+ T+AT+KKLTQGM+
Sbjct: 144 LAHKAPNATNSLCGYKIVTGQPSDRLGEDFSEFNKEFTERLTSVEDLTKATMKKLTQGMS 203
Query: 22 ENNKSMA 2
E++K+M+
Sbjct: 204 EHSKAMS 210
>ref|NP_174198.1| hypothetical protein; protein id: At1g29030.1 [Arabidopsis
thaliana]
Length = 531
Score = 240 bits (612), Expect = 1e-62
Identities = 124/187 (66%), Positives = 146/187 (77%)
Frame = -1
Query: 562 IIEGQADLDAQFNVSDADHIERLISCLHLALPILVKGASSSKFLSYINKYIIPVFDQLPG 383
IIEGQADLD++FN +GA SKFL+Y+NK I+P FDQ
Sbjct: 233 IIEGQADLDSEFN----------------------RGAPGSKFLNYLNKNIMPAFDQ--- 267
Query: 382 ERKVDLLRSLAEFSPYTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYAFHH 203
ERK++LLR+LAE SPYTT Q +RQ+LPSIVQLLKKYM +KTGEEMNFTYVECLLY HH
Sbjct: 268 ERKLNLLRALAEMSPYTTAQVARQILPSIVQLLKKYMPARKTGEEMNFTYVECLLYVLHH 327
Query: 202 LAHKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYKDFTERLNNVEEFTRATIKKLTQGMA 23
LAHK PNATNSLCGYKIVTGQPSDRLGEDFSE K+FTERL +VE+ T+AT+KKLTQGM+
Sbjct: 328 LAHKAPNATNSLCGYKIVTGQPSDRLGEDFSEFNKEFTERLTSVEDLTKATMKKLTQGMS 387
Query: 22 ENNKSMA 2
E++K+M+
Sbjct: 388 EHSKAMS 394
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 453,781,471
Number of Sequences: 1393205
Number of extensions: 9242515
Number of successful extensions: 21466
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 20910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21442
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
