Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012273A_C01 KMC012273A_c01
(553 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199275.1| cytochrome p450 family; protein id: At5g44620.1... 193 1e-48
ref|NP_192968.1| cytochrome p450, putative; protein id: At4g1231... 191 5e-48
ref|NP_192969.1| cytochrome p450 family; protein id: At4g12320.1... 189 1e-47
ref|NP_194002.1| cytochrome p450 family; protein id: At4g22710.1... 187 6e-47
ref|NP_567665.1| cytochrome p450 family; protein id: At4g22690.1... 187 6e-47
>ref|NP_199275.1| cytochrome p450 family; protein id: At5g44620.1, supported by cDNA:
gi_16226349 [Arabidopsis thaliana]
gi|8953760|dbj|BAA98115.1| flavonoid
3',5'-hydroxylase-like; cytochrome P450 [Arabidopsis
thaliana]
Length = 519
Score = 193 bits (491), Expect = 1e-48
Identities = 83/137 (60%), Positives = 108/137 (78%)
Frame = -1
Query: 553 VAPLLVPHSPSETTTVGGYTIPKGSQVFVNVWAIQRDPSNWEKPLEFDPTRFLDAKWEYS 374
VAPLLVP PS+TT VGG+TIPK S++F+N WAI R+P+ WE PL+FDP RFLD +++
Sbjct: 382 VAPLLVPRRPSQTTVVGGFTIPKDSKIFINAWAIHRNPNVWENPLKFDPDRFLDMSYDFK 441
Query: 373 GSDFNYLPFGSGRRICAGITMAEKTVLCFIATLVHLFDWTVPQGEELDISEKFSLVIRMK 194
G+DFNYLPFGSGRRIC G+ M E+ VL +AT +H FDW +PQGE +++ EKF +V+ +K
Sbjct: 442 GNDFNYLPFGSGRRICVGMAMGERVVLYNLATFLHSFDWKIPQGERVEVEEKFGIVLELK 501
Query: 193 TPLVAIPTARLSNPDLY 143
PLVA P RLS+P+LY
Sbjct: 502 NPLVATPVLRLSDPNLY 518
>ref|NP_192968.1| cytochrome p450, putative; protein id: At4g12310.1 [Arabidopsis
thaliana] gi|11249503|pir||T48141 flavonoid
3',5'-hydroxylase homolog T4C9.150 [similarity] -
Arabidopsis thaliana gi|5281042|emb|CAB45978.1|
flavonoid 3', 5'-hydroxylase-like protein [Arabidopsis
thaliana] gi|7267932|emb|CAB78274.1| flavonoid 3',
5'-hydroxylase-like protein [Arabidopsis thaliana]
Length = 520
Score = 191 bits (485), Expect = 5e-48
Identities = 85/136 (62%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
Frame = -1
Query: 547 PLLVPHSPSETTTVGGYTIPKGSQVFVNVWAIQRDPSNWEKPLEFDPTRFLDAK-WEYSG 371
PLLVPH PSET VGGYTIPK +++F+NVW+IQRDP+ WE P EF P RFLD K +++G
Sbjct: 384 PLLVPHRPSETALVGGYTIPKNTKIFINVWSIQRDPNVWEYPTEFRPERFLDKKSCDFTG 443
Query: 370 SDFNYLPFGSGRRICAGITMAEKTVLCFIATLVHLFDWTVPQGEELDISEKFSLVIRMKT 191
+D++YLPFGSGRRICAGI +AE+ +L +ATL+H FDWT+P G LD+ EKF +V+++KT
Sbjct: 444 TDYSYLPFGSGRRICAGIALAERMILYTLATLLHSFDWTIPDGHVLDLEEKFGIVLKLKT 503
Query: 190 PLVAIPTARLSNPDLY 143
PLVA+P RLSN + Y
Sbjct: 504 PLVALPIPRLSNSNFY 519
>ref|NP_192969.1| cytochrome p450 family; protein id: At4g12320.1 [Arabidopsis
thaliana] gi|11249505|pir||T48142 cytochrome P450
homolog T4C9.160 [similarity] - Arabidopsis thaliana
gi|5281043|emb|CAB45979.1| cytochrome P450 homolog
[Arabidopsis thaliana] gi|7267933|emb|CAB78275.1|
cytochrome P450 homolog [Arabidopsis thaliana]
Length = 446
Score = 189 bits (481), Expect = 1e-47
Identities = 84/136 (61%), Positives = 111/136 (80%), Gaps = 1/136 (0%)
Frame = -1
Query: 547 PLLVPHSPSETTTVGGYTIPKGSQVFVNVWAIQRDPSNWEKPLEFDPTRFLDAK-WEYSG 371
PLLVPH PSET VGGYTIPK +++F+NVW+IQRDP+ WE P EF P RFLD K +++G
Sbjct: 310 PLLVPHRPSETALVGGYTIPKNTKIFINVWSIQRDPNVWEYPTEFRPERFLDKKSCDFTG 369
Query: 370 SDFNYLPFGSGRRICAGITMAEKTVLCFIATLVHLFDWTVPQGEELDISEKFSLVIRMKT 191
+D++YLPFGSGRRICAGI +AE+ +L +ATL+H FDW +P+G LD+ EKF +V+++K+
Sbjct: 370 TDYSYLPFGSGRRICAGIALAERMILYTLATLLHSFDWKIPEGHILDLKEKFGIVLKLKS 429
Query: 190 PLVAIPTARLSNPDLY 143
PLVA+P RLSN +LY
Sbjct: 430 PLVALPVPRLSNSNLY 445
>ref|NP_194002.1| cytochrome p450 family; protein id: At4g22710.1 [Arabidopsis
thaliana] gi|7430666|pir||T04566 cytochrome P450 homolog
T12H17.100 - Arabidopsis thaliana
gi|2827548|emb|CAA16556.1| cytochrome P450 - like
protein [Arabidopsis thaliana]
gi|7269117|emb|CAB79226.1| cytochrome P450-like protein
[Arabidopsis thaliana]
Length = 526
Score = 187 bits (476), Expect = 6e-47
Identities = 83/135 (61%), Positives = 106/135 (78%)
Frame = -1
Query: 547 PLLVPHSPSETTTVGGYTIPKGSQVFVNVWAIQRDPSNWEKPLEFDPTRFLDAKWEYSGS 368
PLLVPH SET+ V GYT+PK S++F+NVWAI RDP NW++P EF P RFL+ +++G
Sbjct: 390 PLLVPHRNSETSVVAGYTVPKDSKIFINVWAIHRDPKNWDEPNEFKPERFLENSLDFNGG 449
Query: 367 DFNYLPFGSGRRICAGITMAEKTVLCFIATLVHLFDWTVPQGEELDISEKFSLVIRMKTP 188
DF YLPFGSGRRICA I MAE+ VL IA+L+H FDW PQG++ ++ EKF LV+++K+P
Sbjct: 450 DFKYLPFGSGRRICAAINMAERLVLFNIASLLHSFDWKAPQGQKFEVEEKFGLVLKLKSP 509
Query: 187 LVAIPTARLSNPDLY 143
LVAIP RLS+P LY
Sbjct: 510 LVAIPVPRLSDPKLY 524
>ref|NP_567665.1| cytochrome p450 family; protein id: At4g22690.1, supported by cDNA:
gi_14030620 [Arabidopsis thaliana]
Length = 266
Score = 187 bits (476), Expect = 6e-47
Identities = 83/135 (61%), Positives = 106/135 (78%)
Frame = -1
Query: 547 PLLVPHSPSETTTVGGYTIPKGSQVFVNVWAIQRDPSNWEKPLEFDPTRFLDAKWEYSGS 368
PLLVPH SET+ V GYT+PK S++F+NVWAI RDP NW++P EF P RFL+ +++G
Sbjct: 130 PLLVPHRNSETSVVAGYTVPKDSKIFINVWAIHRDPKNWDEPNEFKPERFLENSLDFNGG 189
Query: 367 DFNYLPFGSGRRICAGITMAEKTVLCFIATLVHLFDWTVPQGEELDISEKFSLVIRMKTP 188
DF YLPFGSGRRICA I MAE+ VL IA+L+H FDW PQG++ ++ EKF LV+++K+P
Sbjct: 190 DFKYLPFGSGRRICAAINMAERLVLFNIASLLHSFDWKAPQGQKFEVEEKFGLVLKLKSP 249
Query: 187 LVAIPTARLSNPDLY 143
LVAIP RLS+P LY
Sbjct: 250 LVAIPVPRLSDPKLY 264
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,274,781
Number of Sequences: 1393205
Number of extensions: 11197154
Number of successful extensions: 30150
Number of sequences better than 10.0: 2839
Number of HSP's better than 10.0 without gapping: 27361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28113
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
