Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012181A_C01 KMC012181A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566565.1| peroxidase, putative; protein id: At3g17070.1, ... 96 2e-19
dbj|BAA94985.1| peroxidase-like protein [Arabidopsis thaliana] 96 2e-19
dbj|BAB97197.2| peroxidase 1 [Marchantia polymorpha] 88 8e-17
pir||T09240 peroxidase (EC 1.11.1.7) prx11 precursor - spinach 75 4e-13
emb|CAA76376.1| peroxidase [Spinacia oleracea] 75 4e-13
>ref|NP_566565.1| peroxidase, putative; protein id: At3g17070.1, supported by cDNA:
155041. [Arabidopsis thaliana]
gi|25453211|sp|Q9LSP0|PE29_ARATH Peroxidase 29 precursor
(Atperox P29) (ATP40) gi|21553641|gb|AAM62734.1|
peroxidase, putative [Arabidopsis thaliana]
Length = 339
Score = 96.3 bits (238), Expect = 2e-19
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = -2
Query: 553 YETILRIRCPLDNDFYNSVPA--VPLDLTPVCFDNPYYTDILGGRGVFGIDSMVAKDPRT 380
++T LR+ CP + + A VP D T V FD YY D + GRG IDS + DPRT
Sbjct: 234 FQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRT 293
Query: 379 LPFVTNFSQDQNHFFEVFSSAFIKLATADVLTDGQGEVRAICSK 248
PFV F+ DQ+ FF FSSAF+KL++ VLT +G +R++C K
Sbjct: 294 RPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCDK 337
>dbj|BAA94985.1| peroxidase-like protein [Arabidopsis thaliana]
Length = 321
Score = 96.3 bits (238), Expect = 2e-19
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = -2
Query: 553 YETILRIRCPLDNDFYNSVPA--VPLDLTPVCFDNPYYTDILGGRGVFGIDSMVAKDPRT 380
++T LR+ CP + + A VP D T V FD YY D + GRG IDS + DPRT
Sbjct: 216 FQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRT 275
Query: 379 LPFVTNFSQDQNHFFEVFSSAFIKLATADVLTDGQGEVRAICSK 248
PFV F+ DQ+ FF FSSAF+KL++ VLT +G +R++C K
Sbjct: 276 RPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCDK 319
>dbj|BAB97197.2| peroxidase 1 [Marchantia polymorpha]
Length = 329
Score = 87.8 bits (216), Expect = 8e-17
Identities = 44/101 (43%), Positives = 60/101 (58%), Gaps = 1/101 (0%)
Frame = -2
Query: 541 LRIRCPLDND-FYNSVPAVPLDLTPVCFDNPYYTDILGGRGVFGIDSMVAKDPRTLPFVT 365
L +CP N F N+ + D T FDN YY D++ G G+F IDS++ ++P T V
Sbjct: 229 LLTQCPTPNAAFLNNNTILSNDFTNFVFDNQYYRDVMNGNGLFKIDSLIGQNPTTAGIVA 288
Query: 364 NFSQDQNHFFEVFSSAFIKLATADVLTDGQGEVRAICSKFN 242
F+ +QN FF VFS AF+K+ + VLT QGEVR C + N
Sbjct: 289 RFAANQNDFFGVFSRAFVKMTSFRVLTGAQGEVRRNCHRLN 329
>pir||T09240 peroxidase (EC 1.11.1.7) prx11 precursor - spinach
Length = 321
Score = 75.5 bits (184), Expect = 4e-13
Identities = 40/104 (38%), Positives = 61/104 (58%)
Frame = -2
Query: 553 YETILRIRCPLDNDFYNSVPAVPLDLTPVCFDNPYYTDILGGRGVFGIDSMVAKDPRTLP 374
+ ++L+ +CP N+ ++ V LD T FDN YY ++ G+GVFG D + D RT P
Sbjct: 221 FASLLKNKCPSLNNNGDNAGQV-LDTTAAQFDNDYYKQVIAGKGVFGTDQAMYNDQRTRP 279
Query: 373 FVTNFSQDQNHFFEVFSSAFIKLATADVLTDGQGEVRAICSKFN 242
+ +F++DQN FF F+++ IKL V + GEVR C + N
Sbjct: 280 IIESFAKDQNLFFREFAASMIKLGNVGV--NEVGEVRLNCRRAN 321
>emb|CAA76376.1| peroxidase [Spinacia oleracea]
Length = 282
Score = 75.5 bits (184), Expect = 4e-13
Identities = 40/104 (38%), Positives = 61/104 (58%)
Frame = -2
Query: 553 YETILRIRCPLDNDFYNSVPAVPLDLTPVCFDNPYYTDILGGRGVFGIDSMVAKDPRTLP 374
+ ++L+ +CP N+ ++ V LD T FDN YY ++ G+GVFG D + D RT P
Sbjct: 182 FASLLKNKCPSLNNNGDNAGQV-LDTTAAQFDNDYYKQVIAGKGVFGTDQAMYNDQRTRP 240
Query: 373 FVTNFSQDQNHFFEVFSSAFIKLATADVLTDGQGEVRAICSKFN 242
+ +F++DQN FF F+++ IKL V + GEVR C + N
Sbjct: 241 IIESFAKDQNLFFREFAASMIKLGNVGV--NEVGEVRLNCRRAN 282
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 465,574,080
Number of Sequences: 1393205
Number of extensions: 9616964
Number of successful extensions: 24220
Number of sequences better than 10.0: 516
Number of HSP's better than 10.0 without gapping: 23444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24082
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
