Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012105A_C01 KMC012105A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK73102.1|AF390556_1 Bax inhibitor 1 [Nicotiana tabacum] 164 7e-40
ref|NP_199523.1| Bax inhibitor-1 like; protein id: At5g47120.1, ... 162 2e-39
gb|AAM65074.1| Bax inhibitor-1 like [Arabidopsis thaliana] 162 2e-39
gb|AAL50980.1|AF453321_1 bax inhibitor-like protein [Brassica ol... 160 1e-38
gb|AAK73101.1|AF390555_1 Bax inhibitor 1 [Brassica napus] gi|179... 159 2e-38
>gb|AAK73102.1|AF390556_1 Bax inhibitor 1 [Nicotiana tabacum]
Length = 249
Score = 164 bits (415), Expect = 7e-40
Identities = 80/98 (81%), Positives = 88/98 (89%)
Frame = -2
Query: 548 GGLLSSGLSILMWLHFASSVFGGSTALFKFELYFGLLVFVGYIIVDTPAIIERAHFGDLD 369
GGLLSSGLSIL WLHFASS+FGGS ALFKFE+YFGLLVFVGYII DT IIE+AH GDLD
Sbjct: 151 GGLLSSGLSILFWLHFASSIFGGSMALFKFEVYFGLLVFVGYIIFDTQDIIEKAHLGDLD 210
Query: 368 YVKHALTLFPDLAAIFVRILIIMLKNSAEKNERKKKRR 255
YVKHALTLF D A+FVRILIIMLKN+++K E+KKKRR
Sbjct: 211 YVKHALTLFTDFVAVFVRILIIMLKNASDKEEKKKKRR 248
>ref|NP_199523.1| Bax inhibitor-1 like; protein id: At5g47120.1, supported by cDNA:
36400., supported by cDNA: gi_11493974, supported by
cDNA: gi_20268759, supported by cDNA: gi_21280946,
supported by cDNA: gi_7209773 [Arabidopsis thaliana]
gi|12229684|sp|Q9LD45|BI1_ARATH Bax inhibitor-1 (BI-1)
(AtBI-1) gi|25338397|pir||T52449 Bax inhibitor-1
[imported] - Arabidopsis thaliana
gi|7209774|dbj|BAA89541.2| Bax inhibitor-1 [Arabidopsis
thaliana] gi|8978079|dbj|BAA98107.1| Bax inhibitor-1
like [Arabidopsis thaliana] gi|11493975|gb|AAG35727.1|
Bax inhibitor 1 [Arabidopsis thaliana]
gi|20268760|gb|AAM14083.1| putative Bax inhibitor-1
[Arabidopsis thaliana] gi|21280947|gb|AAM45107.1|
putative Bax inhibitor-1 [Arabidopsis thaliana]
Length = 247
Score = 162 bits (410), Expect = 2e-39
Identities = 76/98 (77%), Positives = 89/98 (90%)
Frame = -2
Query: 548 GGLLSSGLSILMWLHFASSVFGGSTALFKFELYFGLLVFVGYIIVDTPAIIERAHFGDLD 369
GGLLSSGLS+LMWL FASS+FGGS ++FKFELYFGLL+FVGY++VDT IIE+AH GD+D
Sbjct: 149 GGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMD 208
Query: 368 YVKHALTLFPDLAAIFVRILIIMLKNSAEKNERKKKRR 255
YVKH+LTLF D A+FVRILIIMLKNSA+K E+KKKRR
Sbjct: 209 YVKHSLTLFTDFVAVFVRILIIMLKNSADKEEKKKKRR 246
>gb|AAM65074.1| Bax inhibitor-1 like [Arabidopsis thaliana]
Length = 247
Score = 162 bits (410), Expect = 2e-39
Identities = 76/98 (77%), Positives = 89/98 (90%)
Frame = -2
Query: 548 GGLLSSGLSILMWLHFASSVFGGSTALFKFELYFGLLVFVGYIIVDTPAIIERAHFGDLD 369
GGLLSSGLS+LMWL FASS+FGGS ++FKFELYFGLL+FVGY++VDT IIE+AH GD+D
Sbjct: 149 GGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMD 208
Query: 368 YVKHALTLFPDLAAIFVRILIIMLKNSAEKNERKKKRR 255
YVKH+LTLF D A+FVRILIIMLKNSA+K E+KKKRR
Sbjct: 209 YVKHSLTLFTDFVAVFVRILIIMLKNSADKEEKKKKRR 246
>gb|AAL50980.1|AF453321_1 bax inhibitor-like protein [Brassica oleracea]
Length = 246
Score = 160 bits (404), Expect = 1e-38
Identities = 74/97 (76%), Positives = 88/97 (90%)
Frame = -2
Query: 548 GGLLSSGLSILMWLHFASSVFGGSTALFKFELYFGLLVFVGYIIVDTPAIIERAHFGDLD 369
GGLLSSGLS+LMWL FASS+FGGS ++FKFELYFGLL+FVGY++VDT IIE+AH GD+D
Sbjct: 149 GGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMD 208
Query: 368 YVKHALTLFPDLAAIFVRILIIMLKNSAEKNERKKKR 258
YVKHALTLF D A+FVR+LIIMLKNSA+K E+KK+R
Sbjct: 209 YVKHALTLFTDFVAVFVRVLIIMLKNSADKEEKKKRR 245
>gb|AAK73101.1|AF390555_1 Bax inhibitor 1 [Brassica napus]
gi|17981374|gb|AAL50979.1|AF453320_1 bax inhibitor-like
protein [Brassica oleracea]
Length = 247
Score = 159 bits (402), Expect = 2e-38
Identities = 73/98 (74%), Positives = 89/98 (90%)
Frame = -2
Query: 548 GGLLSSGLSILMWLHFASSVFGGSTALFKFELYFGLLVFVGYIIVDTPAIIERAHFGDLD 369
GGLLSSGLS+LMWL FASS+FGGS ++FKFELYFGLL+FVGY++VDT IIE+AH GD+D
Sbjct: 149 GGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQDIIEKAHLGDMD 208
Query: 368 YVKHALTLFPDLAAIFVRILIIMLKNSAEKNERKKKRR 255
YVKH+LTLF D A+FVR+LIIMLKNSA+K ++KK+RR
Sbjct: 209 YVKHSLTLFTDFVAVFVRVLIIMLKNSADKEDKKKRRR 246
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 510,410,403
Number of Sequences: 1393205
Number of extensions: 11650740
Number of successful extensions: 41789
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 39273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41304
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
