Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012092A_C01 KMC012092A_c01
(517 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568364.1| putative protein; protein id: At5g18580.1, supp... 181 4e-45
ref|XP_192733.2| phosphatase subunit gene g4-1 [Mus musculus] 80 1e-14
gb|AAH06823.1|AAH06823 Unknown (protein for MGC:4952) [Homo sapi... 80 1e-14
ref|NP_067504.1| phosphatase subunit gene g4-1 [Mus musculus] gi... 80 1e-14
ref|NP_060387.1| hypothetical protein FLJ20644; likely ortholog ... 80 1e-14
>ref|NP_568364.1| putative protein; protein id: At5g18580.1, supported by cDNA:
gi_11494361, supported by cDNA: gi_13430807, supported
by cDNA: gi_21281192 [Arabidopsis thaliana]
gi|11494362|gb|AAG35778.1|AF280057_1 tonneau 2
[Arabidopsis thaliana]
gi|11494385|gb|AAG35792.1|AF290025_1 tonneau 2
[Arabidopsis thaliana]
gi|13430808|gb|AAK26026.1|AF360316_1 unknown protein
[Arabidopsis thaliana] gi|21281193|gb|AAM44936.1|
unknown protein [Arabidopsis thaliana]
Length = 480
Score = 181 bits (459), Expect = 4e-45
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = -3
Query: 515 YLTTADIHSLFRDVHHKWIEGGNYELCIEDVRDEIWDMVKPADPLKITLSDLLACKQGGT 336
+LTTADIHSLFRDVH KWIEGGNYELCIEDVRDEIWDMVKP+DPLKITL DLL CKQGGT
Sbjct: 388 FLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPSDPLKITLGDLLGCKQGGT 447
Query: 335 VASMLIDVRGFWAHDNRENLLQEEEEPEEE 246
VASMLIDVRGFWAHDNRENLLQEEEEP EE
Sbjct: 448 VASMLIDVRGFWAHDNRENLLQEEEEPPEE 477
>ref|XP_192733.2| phosphatase subunit gene g4-1 [Mus musculus]
Length = 425
Score = 80.5 bits (197), Expect = 1e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -3
Query: 515 YLTTADIHSLFRDVHHKWIEGGNYELCIEDVRDEIWDMVKPADPLKITLSDLLACKQGGT 336
YL ++ FR + G + +DV+DEI+DMVKP DPLKI+L DL+ QG T
Sbjct: 332 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 391
Query: 335 VASMLIDVRGFWAHDNRENLLQEEEE 258
V ++LID+ GFW ++NRE L+ + E
Sbjct: 392 VTTILIDLNGFWTYENREALVANDNE 417
>gb|AAH06823.1|AAH06823 Unknown (protein for MGC:4952) [Homo sapiens]
gi|15214843|gb|AAH12563.1|AAH12563 Unknown (protein for
MGC:13424) [Homo sapiens]
gi|16307492|gb|AAH10293.1|AAH10293 Unknown (protein for
MGC:4951) [Homo sapiens]
Length = 453
Score = 80.5 bits (197), Expect = 1e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -3
Query: 515 YLTTADIHSLFRDVHHKWIEGGNYELCIEDVRDEIWDMVKPADPLKITLSDLLACKQGGT 336
YL ++ FR + G + +DV+DEI+DMVKP DPLKI+L DL+ QG T
Sbjct: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
Query: 335 VASMLIDVRGFWAHDNRENLLQEEEE 258
V ++LID+ GFW ++NRE L+ + E
Sbjct: 420 VTTILIDLNGFWTYENREALVANDSE 445
>ref|NP_067504.1| phosphatase subunit gene g4-1 [Mus musculus]
gi|7670419|dbj|BAA95061.1| unnamed protein product [Mus
musculus]
Length = 453
Score = 80.5 bits (197), Expect = 1e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -3
Query: 515 YLTTADIHSLFRDVHHKWIEGGNYELCIEDVRDEIWDMVKPADPLKITLSDLLACKQGGT 336
YL ++ FR + G + +DV+DEI+DMVKP DPLKI+L DL+ QG T
Sbjct: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
Query: 335 VASMLIDVRGFWAHDNRENLLQEEEE 258
V ++LID+ GFW ++NRE L+ + E
Sbjct: 420 VTTILIDLNGFWTYENREALVANDNE 445
>ref|NP_060387.1| hypothetical protein FLJ20644; likely ortholog of mouse phosphatase
subunit gene g4-1 [Homo sapiens]
gi|7020883|dbj|BAA91308.1| unnamed protein product [Homo
sapiens]
Length = 453
Score = 80.5 bits (197), Expect = 1e-14
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -3
Query: 515 YLTTADIHSLFRDVHHKWIEGGNYELCIEDVRDEIWDMVKPADPLKITLSDLLACKQGGT 336
YL ++ FR + G + +DV+DEI+DMVKP DPLKI+L DL+ QG T
Sbjct: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
Query: 335 VASMLIDVRGFWAHDNRENLLQEEEE 258
V ++LID+ GFW ++NRE L+ + E
Sbjct: 420 VTTILIDLNGFWTYENREALVANDSE 445
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,971,783
Number of Sequences: 1393205
Number of extensions: 8027997
Number of successful extensions: 22670
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 20680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22288
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
