KMC012059A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KMC012059A_C01 KMC012059A_c01
gGAAAAAAAAATTTCAGGACTTATTTGGATACGGGGTACAATTTCAGGGGAGGCTACAGA
GTATTTAAGCCTTAAAAGAAACTAAGCTCGCAGAAACATATTTAAGTACAAAATGTAACT
GGTAGAAATTGTTCATACAAGAACGAAAATTAGCATCACCTGAAGCTACGCCTAGACACA
AAAGCACATCAATACACTTGAAACTGACATTTACTGAATAAACATGAGATTCGAAGAAGA
AACCCCAAAAGAGAAATGCATGGCTAAAACAGGGTTTATTCTTTCTCTCACATTTAAACG
AATACAGGGCAAGCAGATTTTATTTTCCTTCTCAAAAACCACAAACAACACTTTCATTTG
GTAGTAGTGCTTGCATCTTCATTTACTGAGGGATCTTGTTGAGCTTGCAGTAGGCATAGT
CCTTATATTTCTTGGTCTTGTATTTTGGTGGATTGTCTTGGTTAACCAACTTGGAGTGAG
GACCAACTTCATGGTCTCCTTGGGGCTCTATGAACACCGGCCATGACATTCTTGTCTCCT
CTTTGTTCACTGTTGTTCTGTGCAGGACAGCCTTATATTTCCCATTGCTCAGTATCTCCA
TTTGGTCTCCAATGTGAATGACGAGGG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012059A_C01 KMC012059A_c01
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M547|FLS_EUSGR Flavonol synthase (FLS) gi|7578883|gb|AAF641... 144 7e-34
sp|Q07512|FLS_PETHY Flavonol synthase (FLS) gi|421946|pir||S3351... 140 1e-32
sp|Q41452|FLS_SOLTU Flavonol synthase (FLS) gi|7433193|pir||T073... 139 3e-32
sp|Q9ZWQ9|FLS_CITUN Flavonol synthase (FLS) (CitFLS) gi|4126403|... 138 7e-32
sp|Q9XHG2|FLS_MALDO Flavonol synthase (FLS) gi|4588916|gb|AAD262... 138 7e-32
>sp|Q9M547|FLS_EUSGR Flavonol synthase (FLS) gi|7578883|gb|AAF64168.1|AF240764_1
flavonol synthase [Eustoma grandiflorum]
Length = 334
Score = 144 bits (364), Expect = 7e-34
Identities = 63/80 (78%), Positives = 74/80 (91%)
Frame = -3
Query: 625 LVIHIGDQMEILSNGKYKAVLHRTTVNKEETRMSWPVFIEPQGDHEVGPHSKLVNQDNPP 446
L++HIGDQ+EI+SNGKYK+V HRTTVNKE+TRMSWPVF+EP DHEVGP KLVN++NP
Sbjct: 255 LIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPA 314
Query: 445 KYKTKKYKDYAYCKLNKIPQ 386
K+KTKKYKDYAYCKLNK+PQ
Sbjct: 315 KFKTKKYKDYAYCKLNKLPQ 334
>sp|Q07512|FLS_PETHY Flavonol synthase (FLS) gi|421946|pir||S33510 flavonol synthase -
garden petunia gi|311658|emb|CAA80264.1| flavonol
synthase [Petunia x hybrida]
Length = 348
Score = 140 bits (353), Expect = 1e-32
Identities = 60/80 (75%), Positives = 73/80 (91%)
Frame = -3
Query: 625 LVIHIGDQMEILSNGKYKAVLHRTTVNKEETRMSWPVFIEPQGDHEVGPHSKLVNQDNPP 446
L++HIGDQ+EILSNGKYK+V HRTTVNK++TRMSWPVF+EP +HEVGP KL+++ NPP
Sbjct: 269 LIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPP 328
Query: 445 KYKTKKYKDYAYCKLNKIPQ 386
K+KTKKYKDY YCKLNK+PQ
Sbjct: 329 KFKTKKYKDYVYCKLNKLPQ 348
>sp|Q41452|FLS_SOLTU Flavonol synthase (FLS) gi|7433193|pir||T07373 flavonol synthase -
potato gi|1039357|emb|CAA63092.1| flavonol synthase
[Solanum tuberosum]
Length = 349
Score = 139 bits (350), Expect = 3e-32
Identities = 59/80 (73%), Positives = 71/80 (88%)
Frame = -3
Query: 625 LVIHIGDQMEILSNGKYKAVLHRTTVNKEETRMSWPVFIEPQGDHEVGPHSKLVNQDNPP 446
+++HIGDQ+EILSNGKYK+V HRTTVNK +TRMSWPVF+EP +HEVGP L+N+ NPP
Sbjct: 270 IIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPP 329
Query: 445 KYKTKKYKDYAYCKLNKIPQ 386
K+KTKKYKDY YCKLNK+PQ
Sbjct: 330 KFKTKKYKDYVYCKLNKLPQ 349
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase (FLS) (CitFLS) gi|4126403|dbj|BAA36554.1|
flavonol synthase [Citrus unshiu]
Length = 335
Score = 138 bits (347), Expect = 7e-32
Identities = 62/80 (77%), Positives = 72/80 (89%)
Frame = -3
Query: 625 LVIHIGDQMEILSNGKYKAVLHRTTVNKEETRMSWPVFIEPQGDHEVGPHSKLVNQDNPP 446
LVIHIGDQ+EILSNGKYKAVLHRTTVNK++TRMSWPVF+EP D VGP +LV+ +NPP
Sbjct: 256 LVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPP 315
Query: 445 KYKTKKYKDYAYCKLNKIPQ 386
KYK KK+KDY+YCKLNK+PQ
Sbjct: 316 KYKAKKFKDYSYCKLNKLPQ 335
>sp|Q9XHG2|FLS_MALDO Flavonol synthase (FLS) gi|4588916|gb|AAD26261.1|AF119095_1
flavonol synthase [Malus x domestica]
Length = 337
Score = 138 bits (347), Expect = 7e-32
Identities = 61/80 (76%), Positives = 70/80 (87%)
Frame = -3
Query: 625 LVIHIGDQMEILSNGKYKAVLHRTTVNKEETRMSWPVFIEPQGDHEVGPHSKLVNQDNPP 446
LVIHIGDQMEI+SNGKY +VLHRTTVNK++TR+SWPVF+EP DH VGPH +LVN N P
Sbjct: 258 LVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQP 317
Query: 445 KYKTKKYKDYAYCKLNKIPQ 386
KYKTKKY DY YCK+NK+PQ
Sbjct: 318 KYKTKKYGDYVYCKINKLPQ 337
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 535,624,227
Number of Sequences: 1393205
Number of extensions: 11515822
Number of successful extensions: 29354
Number of sequences better than 10.0: 560
Number of HSP's better than 10.0 without gapping: 28262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29295
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
MF097f06_f |
BP033360 |
1 |
525 |
2 |
MFBL023f02_f |
BP042416 |
2 |
365 |
3 |
MPD056h09_f |
AV773786 |
31 |
387 |
4 |
MF023f03_f |
BP029490 |
104 |
635 |
|
Lotus japonicus
Kazusa DNA Research Institute