Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012047A_C01 KMC012047A_c01
(659 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T47767 hypothetical protein F24I3.150 - Arabidopsis thalian... 92 8e-18
ref|NP_181664.1| unknown protein; protein id: At2g41330.1, suppo... 80 2e-14
ref|NP_596690.1| hypothetical serine-rich secreted protein [Schi... 47 1e-05
gb|AAM44371.1| hypothetical protein [Dictyostelium discoideum] g... 49 8e-05
dbj|BAA78501.1| serine repeat antigen [Plasmodium falciparum] 48 1e-04
>pir||T47767 hypothetical protein F24I3.150 - Arabidopsis thaliana
gi|6911877|emb|CAB72177.1| putative protein [Arabidopsis
thaliana]
Length = 417
Score = 91.7 bits (226), Expect = 8e-18
Identities = 53/113 (46%), Positives = 69/113 (60%)
Frame = +1
Query: 319 SPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPMPLVHHPPTREGDTHQLV 498
S ++ ASS SS+S S++ S +K +SSP RA S P PLVHHPP R+GD+H LV
Sbjct: 3 SSASKTASSVSSASSSSAFSPPPTKFSSDSSSPAVQRAFSFPTPLVHHPPARKGDSHHLV 62
Query: 499 SLTSTSYGSLLMIDQKVPKFSQKDPHLEPLLTKSFQKGSNPKESEHALSPDSV 657
SLTSTSYGSLL++D K S D P ++ S + +P +SPDSV
Sbjct: 63 SLTSTSYGSLLLLDLDGSKNSSSDQQTLPRISISGKNTPDP------VSPDSV 109
>ref|NP_181664.1| unknown protein; protein id: At2g41330.1, supported by cDNA:
gi_18491270 [Arabidopsis thaliana]
gi|25342044|pir||D84840 hypothetical protein At2g41330
[imported] - Arabidopsis thaliana
gi|3894191|gb|AAC78540.1| unknown protein [Arabidopsis
thaliana] gi|18491271|gb|AAL69460.1| At2g41330/F13H10.12
[Arabidopsis thaliana]
Length = 402
Score = 80.1 bits (196), Expect = 2e-14
Identities = 48/112 (42%), Positives = 68/112 (59%), Gaps = 9/112 (8%)
Frame = +1
Query: 349 SSSSFSASSSSSSSKSQCSNSSPKP---------PRALSLPMPLVHHPPTREGDTHQLVS 501
SS S +ASS+S+SS + NS P+ P+A + PMP +HHPP ++GDTH VS
Sbjct: 3 SSVSKTASSASASSITSILNSPPETEFNIPSSSVPKAFTFPMPSIHHPPAKKGDTHHFVS 62
Query: 502 LTSTSYGSLLMIDQKVPKFSQKDPHLEPLLTKSFQKGSNPKESEHALSPDSV 657
LTST+YGSL++ D+ Q PH+ + KS +K +E+ + SPDSV
Sbjct: 63 LTSTTYGSLVLDDR------QTLPHIS-VSGKSNKKMPETEEARDSFSPDSV 107
>ref|NP_596690.1| hypothetical serine-rich secreted protein [Schizosaccharomyces
pombe] gi|7493381|pir||T39903 serine-rich protein -
fission yeast (Schizosaccharomyces pombe)
gi|3873550|emb|CAA22127.1| hypothetical serine-rich
secreted protein [Schizosaccharomyces pombe]
Length = 534
Score = 47.0 bits (110), Expect(2) = 9e-05
Identities = 34/90 (37%), Positives = 50/90 (54%), Gaps = 2/90 (2%)
Frame = +1
Query: 268 SASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSS--SKSQCSNSSPKPPRALSL 441
S+S +T+ + + + + S S+SL+SSSSSS+ S+SSSSSS S S S+SSP +
Sbjct: 232 SSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTIS 291
Query: 442 PMPLVHHPPTREGDTHQLVSLTSTSYGSLL 531
PT T S +S+S+ S L
Sbjct: 292 SSSSSSSSPTSTSSTISSSSSSSSSFSSTL 321
Score = 42.4 bits (98), Expect = 0.006
Identities = 35/130 (26%), Positives = 57/130 (42%)
Frame = +1
Query: 268 SASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPM 447
S+S ++T+ ++ + PS S +SSS+SSS S+SSSSS++ S S+SS + S
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS 282
Query: 448 PLVHHPPTREGDTHQLVSLTSTSYGSLLMIDQKVPKFSQKDPHLEPLLTKSFQKGSNPKE 627
P T +S +S+S S + S L+ S S+
Sbjct: 283 PT---------STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFS 333
Query: 628 SEHALSPDSV 657
S S ++
Sbjct: 334 SSPTSSSSTI 343
Score = 39.7 bits (91), Expect = 0.036
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 256 SHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKP 423
S S + T++ +++ + + S S++L+SSS SSS S SSS +SS S S+SS P
Sbjct: 295 SSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
Score = 38.9 bits (89), Expect = 0.062
Identities = 38/137 (27%), Positives = 61/137 (43%), Gaps = 4/137 (2%)
Frame = +1
Query: 256 SHGCSASKTTTMVANRNPENPSP---SASLASSSSSSSFSASSSSSSSKSQCSNSSPKPP 426
S S + T++ +++ + + SP S++++SSSSSSS +S+ SSSS S S+ S P
Sbjct: 278 SSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPT 337
Query: 427 RALSLPMPLVHHPPTREGDTHQLVSLTSTSYGSLLMIDQKVPKFSQKDPHLEPLLTKSFQ 606
+ S P + + S +S+S+ S + S LT S
Sbjct: 338 SSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTV---------SSSSSTSSSTLTSSSS 388
Query: 607 KGSNP-KESEHALSPDS 654
S P S H+ S S
Sbjct: 389 SSSRPASSSSHSSSLSS 405
Score = 37.7 bits (86), Expect(2) = 1e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 268 SASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPM 447
S+SK+++ ++ + S S+S +SSSSSS +SSSS S S S+ S ++ S P+
Sbjct: 360 SSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPV 419
Query: 448 -PLVHHPPT-----REGDTHQLVSLTS 510
+H T +H L SL+S
Sbjct: 420 SSAFYHNSTSSRSSSHSSSHSLSSLSS 446
Score = 36.6 bits (83), Expect = 0.31
Identities = 19/60 (31%), Positives = 38/60 (62%)
Frame = +1
Query: 235 LGEEKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSS 414
L S S+S +++++++ + + SP+++ ++ SSSSS S+S +S+SS S+SS
Sbjct: 254 LSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSS 313
Score = 35.4 bits (80), Expect = 0.68
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 256 SHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSP 417
S S+S +++ ++ + S S+ ++SSSSSSS S+SS+ S S S+SSP
Sbjct: 247 SSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSP 300
Score = 33.5 bits (75), Expect = 2.6
Identities = 32/128 (25%), Positives = 56/128 (43%)
Frame = +1
Query: 271 ASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPMP 450
+S T++ + + + S +S A +S+SSS+ +SSS SS S S+SS + SL
Sbjct: 179 SSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTS 238
Query: 451 LVHHPPTREGDTHQLVSLTSTSYGSLLMIDQKVPKFSQKDPHLEPLLTKSFQKGSNPKES 630
+ P T + SL+S+S S + +++ S S+P +
Sbjct: 239 SI--PSTSSSSSSTSSSLSSSSSSST----------ASSSSSSSSIISSSSSSSSSPTST 286
Query: 631 EHALSPDS 654
+S S
Sbjct: 287 SSTISSSS 294
Score = 33.1 bits (74), Expect(2) = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 17 SCSSTSPSTTDSSLSTTSKSLLSFSHSFHQSLLSQNMYPMETSSFEEQIIISKEDIVHKT 196
S SS+SP++T S++S++S S SFS + S +S + + + I S +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSS 353
Query: 197 SVESEKKKRKGS 232
S S K S
Sbjct: 354 SFSSTTSSSKSS 365
Score = 33.1 bits (74), Expect = 3.4
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 268 SASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALS 438
SA+ T+T + + + S+S SSSSSS+ ++SS S+SS S+SS +LS
Sbjct: 199 SAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLS 255
Score = 32.3 bits (72), Expect = 5.8
Identities = 26/83 (31%), Positives = 40/83 (47%)
Frame = +1
Query: 268 SASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPM 447
S+S ++ + + S S+S +SSS SS+ S+S SSSS S S+SS L+
Sbjct: 328 SSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSS 387
Query: 448 PLVHHPPTREGDTHQLVSLTSTS 516
P + + L S S+S
Sbjct: 388 SSSSRPASSSSHSSSLSSHKSSS 410
Score = 32.0 bits (71), Expect = 7.5
Identities = 33/131 (25%), Positives = 50/131 (37%), Gaps = 2/131 (1%)
Frame = +1
Query: 268 SASKTTTMVANRNPENPSPSASLASSSS--SSSFSASSSSSSSKSQCSNSSPKPPRALSL 441
S S + V++ + S +A ++SSS SSS SSSSS S S S + S+
Sbjct: 181 STSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSI 240
Query: 442 PMPLVHHPPTREGDTHQLVSLTSTSYGSLLMIDQKVPKFSQKDPHLEPLLTKSFQKGSNP 621
P T + S T++S S I S ++ S S+P
Sbjct: 241 PSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSP 300
Query: 622 KESEHALSPDS 654
+ +S S
Sbjct: 301 TSTSSTISSSS 311
Score = 20.8 bits (42), Expect(2) = 9e-05
Identities = 15/45 (33%), Positives = 19/45 (41%)
Frame = +2
Query: 14 PSCSSTSPSTTDSSLSTTSKSLLSFSHSFHQSLLSQNMYPMETSS 148
PS +S S + SSLS++ S S S S TSS
Sbjct: 150 PSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSS 194
>gb|AAM44371.1| hypothetical protein [Dictyostelium discoideum]
gi|28828379|gb|AAM09347.2| hypothetical protein
[Dictyostelium discoideum]
Length = 545
Score = 48.5 bits (114), Expect = 8e-05
Identities = 41/103 (39%), Positives = 54/103 (51%), Gaps = 5/103 (4%)
Frame = +1
Query: 292 VANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPMPLVHHPPT 471
V P + S S+S +SSSSSSS S+SSSSSSS S S+SS PP + + P
Sbjct: 105 VEKPTPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPPLS-TFP--------- 154
Query: 472 REGDTHQLVSLTSTSYGSL-----LMIDQKVPKFSQKDPHLEP 585
LV T+ SYGSL L+ D K ++K+ +EP
Sbjct: 155 ------NLVESTTNSYGSLDISRYLLNDNL--KSNEKNRSIEP 189
>dbj|BAA78501.1| serine repeat antigen [Plasmodium falciparum]
Length = 261
Score = 48.1 bits (113), Expect = 1e-04
Identities = 28/63 (44%), Positives = 41/63 (64%)
Frame = +1
Query: 238 GEEKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSP 417
GE+ S S+S +++ ++ + + S S+S +SSSSSSS S+SSSSSSS S S+SS
Sbjct: 168 GEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSE 227
Query: 418 KPP 426
P
Sbjct: 228 SLP 230
Score = 46.2 bits (108), Expect = 4e-04
Identities = 30/74 (40%), Positives = 44/74 (58%)
Frame = +1
Query: 244 EKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKP 423
E+ S S+S +++ ++ + + S S+S +SSSSSSS S+SSSSSSS S S+SS +
Sbjct: 169 EQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSES 228
Query: 424 PRALSLPMPLVHHP 465
A P V P
Sbjct: 229 LPANGPDSPTVKPP 242
Score = 45.4 bits (106), Expect = 7e-04
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 238 GEEKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSS 414
G +QS S+S +++ ++ + + S S+S +SSSSSSS S+SSSSSSS S S+SS
Sbjct: 165 GTTGEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 223
Score = 45.4 bits (106), Expect = 7e-04
Identities = 27/68 (39%), Positives = 39/68 (56%)
Frame = +1
Query: 241 EEKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPK 420
+ S S+S +++ ++ N + S S+S +SSSSSSS S+SSSSSSS S S+S
Sbjct: 170 QSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSESL 229
Query: 421 PPRALSLP 444
P P
Sbjct: 230 PANGPDSP 237
Score = 43.1 bits (100), Expect = 0.003
Identities = 31/77 (40%), Positives = 44/77 (56%), Gaps = 4/77 (5%)
Frame = +1
Query: 217 EEKGFFLGEEKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKS 396
E+ S S+S + + ++ + + S S+S +SSSSSSS S+SSSSSSS+S
Sbjct: 169 EQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSES 228
Query: 397 QCSN--SSP--KPPRAL 435
+N SP KPPR L
Sbjct: 229 LPANGPDSPTVKPPRNL 245
Score = 42.4 bits (98), Expect = 0.006
Identities = 24/56 (42%), Positives = 39/56 (68%)
Frame = +1
Query: 247 KQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSS 414
K S+G + ++++ ++ + + S S+S ++SSSSSS S+SSSSSSS S S+SS
Sbjct: 160 KLPSNGTTGEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSS 215
Score = 41.2 bits (95), Expect = 0.012
Identities = 25/63 (39%), Positives = 40/63 (62%)
Frame = +1
Query: 262 GCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSL 441
G +S +++ ++ + + S S++ +SSSSSSS S+SSSSSSS S S+SS + S
Sbjct: 168 GEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSE 227
Query: 442 PMP 450
+P
Sbjct: 228 SLP 230
Score = 39.7 bits (91), Expect = 0.036
Identities = 25/57 (43%), Positives = 38/57 (65%)
Frame = +1
Query: 244 EKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSS 414
EK++ ++ TT ++ + + S S+S +SSSSS+S S+SSSSSSS S S+SS
Sbjct: 154 EKKKYVKLPSNGTTGEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSS 210
Score = 38.1 bits (87), Expect = 0.11
Identities = 24/56 (42%), Positives = 32/56 (56%)
Frame = +1
Query: 247 KQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSS 414
+ S K + +N S S+S +SSSSSSS S+SSS+SSS S S+SS
Sbjct: 147 ESNSGSLEKKKYVKLPSNGTTGEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSS 202
Score = 37.7 bits (86), Expect = 0.14
Identities = 25/58 (43%), Positives = 36/58 (61%)
Frame = +1
Query: 241 EEKQQSHGCSASKTTTMVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSS 414
E+K+ S T ++ + + S S+S +SSSS+SS S+SSSSSSS S S+SS
Sbjct: 154 EKKKYVKLPSNGTTGEQSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSS 211
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 654,232,180
Number of Sequences: 1393205
Number of extensions: 16395430
Number of successful extensions: 272912
Number of sequences better than 10.0: 3104
Number of HSP's better than 10.0 without gapping: 100835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191546
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28289785200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
