Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012017A_C01 KMC012017A_c01
(591 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199579.1| putative protein; protein id: At5g47680.1, supp... 101 8e-21
ref|NP_689505.1| hypothetical protein MGC27034 [Homo sapiens] gi... 71 1e-11
gb|AAD21019.1| unknown [Homo sapiens] 69 4e-11
ref|XP_131222.1| similar to hypothetical protein MGC27034 [Homo ... 68 8e-11
dbj|BAC41020.1| unnamed protein product [Mus musculus] 68 8e-11
>ref|NP_199579.1| putative protein; protein id: At5g47680.1, supported by cDNA:
15623. [Arabidopsis thaliana] gi|9758796|dbj|BAB09094.1|
contains similarity to unknown
protein~gene_id:MNJ7.27~pir||T39016 [Arabidopsis
thaliana] gi|21553662|gb|AAM62755.1| unknown
[Arabidopsis thaliana] gi|27311627|gb|AAO00779.1|
putative protein [Arabidopsis thaliana]
Length = 344
Score = 101 bits (251), Expect = 8e-21
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 11/93 (11%)
Frame = -2
Query: 590 TAKLPIANFMKMSSSQVLTVNQVVEILLKFLETRDWKTSFFSVIPQRKRC---------- 441
TAKLPI +MKMSSSQVLTVNQV+EIL+KFLETRDWKT+FF+VIPQRKR
Sbjct: 246 TAKLPIGEYMKMSSSQVLTVNQVLEILVKFLETRDWKTAFFTVIPQRKRTGLDPVDCSKL 305
Query: 440 -QAGSEGNAEDTLEEECEEKGDAMESKKKCIEV 345
E +DT E +K D +E KK C+EV
Sbjct: 306 EHISEEHQEKDTEANESADKHDLLERKKVCVEV 338
>ref|NP_689505.1| hypothetical protein MGC27034 [Homo sapiens]
gi|20306898|gb|AAH28373.1| similar to unknown [Homo
sapiens]
Length = 339
Score = 70.9 bits (172), Expect = 1e-11
Identities = 33/70 (47%), Positives = 49/70 (69%), Gaps = 7/70 (10%)
Frame = -2
Query: 587 AKLPIANFMKMSSSQVLTVNQVVEILLKFLETRDWKTSFFSVIPQR-------KRCQAGS 429
A+LP+ NF+KM+S +VL VN V EI+L++LETRDW+ +FF+++PQR K C++ S
Sbjct: 230 AQLPLGNFVKMNSRKVLAVNHVFEIILEYLETRDWQEAFFTILPQRKGAVPTDKACESAS 289
Query: 428 EGNAEDTLEE 399
N +EE
Sbjct: 290 HDNQSVRMEE 299
>gb|AAD21019.1| unknown [Homo sapiens]
Length = 233
Score = 68.9 bits (167), Expect = 4e-11
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = -2
Query: 587 AKLPIANFMKMSSSQVLTVNQVVEILLKFLETRDWKTSFFSVIPQRKRC---QAGSEGNA 417
A+LP+ NF+KM+S +VL VN V EI+L++LETRDW+ +FF+++PQRK E +
Sbjct: 124 AQLPLGNFVKMNSRKVLAVNHVFEIILEYLETRDWQEAFFTILPQRKGAVPTDKACESAS 183
Query: 416 EDTLEEECEEKGDAMESKKK 357
D EE G +S ++
Sbjct: 184 HDFQSVRMEEGGSDSDSSEE 203
>ref|XP_131222.1| similar to hypothetical protein MGC27034 [Homo sapiens] [Mus
musculus] gi|25055605|ref|XP_203970.1| similar to
hypothetical protein MGC27034 [Homo sapiens] [Mus
musculus]
Length = 330
Score = 68.2 bits (165), Expect = 8e-11
Identities = 29/47 (61%), Positives = 42/47 (88%)
Frame = -2
Query: 587 AKLPIANFMKMSSSQVLTVNQVVEILLKFLETRDWKTSFFSVIPQRK 447
A+LP+A+F+KM+S +VL VN V EI+L+FLETRDW+ +FF+++PQRK
Sbjct: 231 AQLPLADFVKMNSRKVLAVNHVFEIILEFLETRDWQEAFFTILPQRK 277
>dbj|BAC41020.1| unnamed protein product [Mus musculus]
Length = 330
Score = 68.2 bits (165), Expect = 8e-11
Identities = 29/47 (61%), Positives = 42/47 (88%)
Frame = -2
Query: 587 AKLPIANFMKMSSSQVLTVNQVVEILLKFLETRDWKTSFFSVIPQRK 447
A+LP+A+F+KM+S +VL VN V EI+L+FLETRDW+ +FF+++PQRK
Sbjct: 231 AQLPLADFVKMNSRKVLAVNHVFEIILEFLETRDWQEAFFTILPQRK 277
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,521,272
Number of Sequences: 1393205
Number of extensions: 9849231
Number of successful extensions: 22316
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22263
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
