Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC012000A_C01 KMC012000A_c01
(552 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563770.1| expressed protein; protein id: At1g06690.1, sup... 192 2e-48
gb|AAF24809.1|AC007592_2 F12K11.2 [Arabidopsis thaliana] 192 2e-48
dbj|BAC19952.1| putative aldo/keto reductase [Oryza sativa (japo... 179 2e-44
dbj|BAC21406.1| putative oxidoreductase [Oryza sativa (japonica ... 164 7e-40
ref|NP_485268.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 94 1e-18
>ref|NP_563770.1| expressed protein; protein id: At1g06690.1, supported by cDNA:
gi_15215593 [Arabidopsis thaliana]
gi|15215594|gb|AAK91342.1| At1g06690/F4H5_17
[Arabidopsis thaliana] gi|24111265|gb|AAN46756.1|
At1g06690/F4H5_17 [Arabidopsis thaliana]
Length = 377
Score = 192 bits (488), Expect = 2e-48
Identities = 94/132 (71%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Frame = +2
Query: 158 IRAVASEGSATLKTVEE-KVKLGGSDLKVTTLGIGAWSWGDTTYWNNFEWNDRNEKAAKA 334
+RAVAS S EE KVKLGGSDLKVT LGIG WSWGD +YWN+F+W+DR KAAK
Sbjct: 30 VRAVASGDSVAPAISEESKVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKG 89
Query: 335 AFDASINGGLTFFDTAEVYGSGLAFGAVNSETLLGRFIRERKEKDPNVEVAVATKFAALP 514
AFD S++ G+ FFDTAEVYGS + GA++SETLLGRFIRERKE+ P EV+VATKFAALP
Sbjct: 90 AFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALP 149
Query: 515 WRFGRESVITAL 550
WRFGRESV+TAL
Sbjct: 150 WRFGRESVVTAL 161
>gb|AAF24809.1|AC007592_2 F12K11.2 [Arabidopsis thaliana]
Length = 476
Score = 192 bits (488), Expect = 2e-48
Identities = 94/132 (71%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Frame = +2
Query: 158 IRAVASEGSATLKTVEE-KVKLGGSDLKVTTLGIGAWSWGDTTYWNNFEWNDRNEKAAKA 334
+RAVAS S EE KVKLGGSDLKVT LGIG WSWGD +YWN+F+W+DR KAAK
Sbjct: 30 VRAVASGDSVAPAISEESKVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKG 89
Query: 335 AFDASINGGLTFFDTAEVYGSGLAFGAVNSETLLGRFIRERKEKDPNVEVAVATKFAALP 514
AFD S++ G+ FFDTAEVYGS + GA++SETLLGRFIRERKE+ P EV+VATKFAALP
Sbjct: 90 AFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALP 149
Query: 515 WRFGRESVITAL 550
WRFGRESV+TAL
Sbjct: 150 WRFGRESVVTAL 161
>dbj|BAC19952.1| putative aldo/keto reductase [Oryza sativa (japonica
cultivar-group)] gi|24059944|dbj|BAC21407.1| putative
aldo/keto reductase [Oryza sativa (japonica
cultivar-group)]
Length = 376
Score = 179 bits (455), Expect = 2e-44
Identities = 90/137 (65%), Positives = 111/137 (80%), Gaps = 2/137 (1%)
Frame = +2
Query: 146 RGHRIRAVASEGSATLKTVEE--KVKLGGSDLKVTTLGIGAWSWGDTTYWNNFEWNDRNE 319
R R ++ +A VEE KV+LGGSD+ VT LGIGAWSWGDTTYWN F+W+DR
Sbjct: 26 RPPRASGASASAAAAAAAVEEDGKVRLGGSDVAVTKLGIGAWSWGDTTYWNEFQWDDRKL 85
Query: 320 KAAKAAFDASINGGLTFFDTAEVYGSGLAFGAVNSETLLGRFIRERKEKDPNVEVAVATK 499
KAAK AFDAS++ G+TFFDTAEVYG+G++ GA+NSE+LLGRFI+ER++K+ VEVA+ATK
Sbjct: 86 KAAKGAFDASVDCGITFFDTAEVYGAGIS-GAINSESLLGRFIKERQQKE-QVEVAIATK 143
Query: 500 FAALPWRFGRESVITAL 550
FAALPWR GR SVI+AL
Sbjct: 144 FAALPWRLGRGSVISAL 160
>dbj|BAC21406.1| putative oxidoreductase [Oryza sativa (japonica cultivar-group)]
Length = 370
Score = 164 bits (415), Expect = 7e-40
Identities = 90/139 (64%), Positives = 110/139 (78%), Gaps = 1/139 (0%)
Frame = +2
Query: 137 GHSRGHRIRAVASEGSATLKTVEE-KVKLGGSDLKVTTLGIGAWSWGDTTYWNNFEWNDR 313
G R RAVAS+ +A + EE KV+LGGS++ V+ LGIGAWSWGDTTYWN+ EW DR
Sbjct: 25 GRRRLAAARAVASDAAAAKVSEEEGKVRLGGSEVAVSKLGIGAWSWGDTTYWNDSEW-DR 83
Query: 314 NEKAAKAAFDASINGGLTFFDTAEVYGSGLAFGAVNSETLLGRFIRERKEKDPNVEVAVA 493
+ AKAAFD SI+ G+T FDTAEVYG+ L GAVNSE+LLG FI+ER+EK+ ++VAVA
Sbjct: 84 RLQEAKAAFDTSIDNGMTLFDTAEVYGTAL-MGAVNSESLLG-FIKERQEKE-QIDVAVA 140
Query: 494 TKFAALPWRFGRESVITAL 550
TKFAALPWRFGR SV++AL
Sbjct: 141 TKFAALPWRFGRGSVLSAL 159
>ref|NP_485268.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25316334|pir||AF1959
hypothetical protein all1225 [imported] - Nostoc sp.
(strain PCC 7120) gi|17130572|dbj|BAB73182.1|
ORF_ID:all1225~hypothetical protein [Nostoc sp. PCC
7120]
Length = 315
Score = 93.6 bits (231), Expect = 1e-18
Identities = 52/115 (45%), Positives = 68/115 (58%)
Frame = +2
Query: 206 EKVKLGGSDLKVTTLGIGAWSWGDTTYWNNFEWNDRNEKAAKAAFDASINGGLTFFDTAE 385
E + LG + VT L IG W+WGD +WN N + + AF A++ G+TFFDTAE
Sbjct: 2 ETITLGKNGPTVTPLCIGTWAWGDKLFWNY--GNGYGSEQLQEAFTAALEAGVTFFDTAE 59
Query: 386 VYGSGLAFGAVNSETLLGRFIRERKEKDPNVEVAVATKFAALPWRFGRESVITAL 550
VYG GL SE LLG+F+++ K+ V +ATKF LPWRF +SV AL
Sbjct: 60 VYGLGL------SEELLGQFVKQAKQ-----PVQIATKFGPLPWRFSGQSVSDAL 103
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,543,166
Number of Sequences: 1393205
Number of extensions: 10025260
Number of successful extensions: 30551
Number of sequences better than 10.0: 390
Number of HSP's better than 10.0 without gapping: 29306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30334
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
