Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011745A_C01 KMC011745A_c01
(512 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_702424.1| hypothetical protein [Plasmodium falciparum 3D7... 36 0.30
ref|NP_705424.1| hypothetical protein [Plasmodium falciparum 3D7... 35 0.51
ref|NP_113414.1| hypothetical protein [Guillardia theta] gi|1258... 32 3.3
gb|EAA21621.1| hypothetical protein [Plasmodium yoelii yoelii] 32 4.3
ref|NP_004668.1| X Kell blood group precursor-related, Y-linked;... 32 5.6
>ref|NP_702424.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23497608|gb|AAN37148.1|AE014825_7 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 967
Score = 35.8 bits (81), Expect = 0.30
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 94 NKFIYINKN*VYKYT*AKNLAHQSNMVYFEYGQD*NFKKKARELSYFFSFSFSNY 258
NKFIYINKN +Y ++ N Y EY + N+ K +++ FF + Y
Sbjct: 407 NKFIYINKNTIY----TQHYEQLKNYTYMEYDYNINYPIKIKDVLNFFEINEDFY 457
>ref|NP_705424.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23615669|emb|CAD52661.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 595
Score = 35.0 bits (79), Expect = 0.51
Identities = 32/97 (32%), Positives = 50/97 (50%), Gaps = 9/97 (9%)
Frame = +1
Query: 1 TRNKRWYI------IIFPKDKLSIKIINSFSYAPKKHNKFIYINKN*VYKYT*AKNLAHQ 162
T NK++Y I K+K SIK ++ +Y+P H ++K+ KNL++
Sbjct: 319 TNNKKYYYNKNHNNINLNKNKSSIK--STQNYSPLFHRS--------IHKFELKKNLSNI 368
Query: 163 SNMVYFEYGQD*NFKKKARE-LSYFF--SFSFSNYQS 264
N YF YG D N KKK ++ +FF +F + N +S
Sbjct: 369 RNWEYF-YGVDNNKKKKKKKKKKFFFCSTFLYDNIKS 404
>ref|NP_113414.1| hypothetical protein [Guillardia theta] gi|12580665|emb|CAC26982.1|
hypothetical protein [Guillardia theta]
Length = 626
Score = 32.3 bits (72), Expect = 3.3
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 98 NSFTSTKIKFINILERRIWPTSLIWSTLNMARIETSKKKQGSFHIFFLFLFLITSPKI 271
N T+ FI ++ I+P +++LN K + S H +F+FLFL+ KI
Sbjct: 221 NKITNKNTVFIE--KKEIYPEKYYYNSLNSNNFFRKYKNKTSEHKYFVFLFLVNIEKI 276
>gb|EAA21621.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 262
Score = 32.0 bits (71), Expect = 4.3
Identities = 27/83 (32%), Positives = 36/83 (42%), Gaps = 13/83 (15%)
Frame = +1
Query: 43 KLSIKIINSFSYAPKKH-----NKFIYINKN*VYKYT*AKNLAHQS--------NMVYFE 183
K I++ SFS KK+ NK I ++K KYT KN + N
Sbjct: 171 KQGIQVFRSFSCKKKKNFESARNKAIILSKQYNKKYTRQKNPEKDNSKDHLIINNSTNLV 230
Query: 184 YGQD*NFKKKARELSYFFSFSFS 252
D + +KK+ L YF S SFS
Sbjct: 231 VKHDYDIRKKSTRLLYFLSSSFS 253
>ref|NP_004668.1| X Kell blood group precursor-related, Y-linked; Testis-specific
XK-related protein on Y [Homo sapiens]
gi|6136452|sp|O14609|XKRY_HUMAN Testis-specific XK
related protein Y gi|2580580|gb|AAC51844.1|
testis-specific XK Related Y [Homo sapiens]
Length = 159
Score = 31.6 bits (70), Expect = 5.6
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 65 IHFPMHQKNTINSFTSTKIKFINILERRIWPTSLIWSTLNMARIETSKKKQGSFHIFFLF 244
IH + T N F + K++ I ++ IW + +I S + + KQGS H +
Sbjct: 21 IHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVVTLAFFPASLKQGSLHFLLII 80
Query: 245 LFLI 256
F++
Sbjct: 81 YFVL 84
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,041,169
Number of Sequences: 1393205
Number of extensions: 9945594
Number of successful extensions: 20601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20412
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
