Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011679A_C01 KMC011679A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192977.1| stress-induced protein sti1 -like protein; prot... 120 8e-39
gb|AAF19538.1|AC007190_6 F23N19.10 [Arabidopsis thaliana] 122 7e-37
gb|AAO64147.1| putative TPR-repeat protein [Arabidopsis thaliana] 122 7e-37
ref|NP_176461.1| TPR-repeat protein; protein id: At1g62740.1 [Ar... 122 7e-37
ref|NP_172691.1| hypothetical protein; protein id: At1g12270.1, ... 118 3e-36
>ref|NP_192977.1| stress-induced protein sti1 -like protein; protein id: At4g12400.1
[Arabidopsis thaliana] gi|11346440|pir||T48150
stress-induced protein sti1-like protein - Arabidopsis
thaliana gi|5281051|emb|CAB45987.1| stress-induced
protein sti1-like protein [Arabidopsis thaliana]
gi|7267942|emb|CAB78283.1| stress-induced protein
sti1-like protein [Arabidopsis thaliana]
Length = 558
Score = 120 bits (301), Expect(3) = 8e-39
Identities = 53/72 (73%), Positives = 66/72 (91%)
Frame = -2
Query: 529 VQYFMKDHEKALETYREGLKLDPNHQELLDGIGKCMQQINKASRGDLTPEELKERQAKGM 350
+Q+FMK+++KA+ETY+EGLK DP +QE LDG+ +C++QINKASRGDLTPEELKERQAK M
Sbjct: 446 IQFFMKEYDKAMETYQEGLKHDPKNQEFLDGVRRCVEQINKASRGDLTPEELKERQAKAM 505
Query: 349 QDPEIQNILQDP 314
QDPE+QNIL DP
Sbjct: 506 QDPEVQNILSDP 517
Score = 47.4 bits (111), Expect(3) = 8e-39
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -3
Query: 315 PVMRQVLVDFQENPKAAQDHAKN 247
PVMRQVLVDFQENPKAAQ+H KN
Sbjct: 517 PVMRQVLVDFQENPKAAQEHMKN 539
Score = 34.7 bits (78), Expect(3) = 8e-39
Identities = 15/19 (78%), Positives = 19/19 (99%)
Frame = -1
Query: 245 PMVMSKIQKLISAGIVQMK 189
PMVM+KIQKL+SAGIVQ++
Sbjct: 540 PMVMNKIQKLVSAGIVQVR 558
>gb|AAF19538.1|AC007190_6 F23N19.10 [Arabidopsis thaliana]
Length = 594
Score = 122 bits (305), Expect(3) = 7e-37
Identities = 55/72 (76%), Positives = 68/72 (94%)
Frame = -2
Query: 529 VQYFMKDHEKALETYREGLKLDPNHQELLDGIGKCMQQINKASRGDLTPEELKERQAKGM 350
VQ+FMK+++ A+ETY++GL+ DPN+QELLDG+ +C+QQINKA+RGDLTPEELKERQAKGM
Sbjct: 482 VQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQQINKANRGDLTPEELKERQAKGM 541
Query: 349 QDPEIQNILQDP 314
QDPEIQNIL DP
Sbjct: 542 QDPEIQNILTDP 553
Score = 37.7 bits (86), Expect(3) = 7e-37
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = -3
Query: 315 PVMRQVLVDFQENPKAAQDHAKN 247
PVMRQVL D QENP AAQ H +N
Sbjct: 553 PVMRQVLSDLQENPAAAQKHMQN 575
Score = 36.2 bits (82), Expect(3) = 7e-37
Identities = 16/19 (84%), Positives = 19/19 (99%)
Frame = -1
Query: 245 PMVMSKIQKLISAGIVQMK 189
PM+M+KIQKLIS+GIVQMK
Sbjct: 576 PMIMNKIQKLISSGIVQMK 594
>gb|AAO64147.1| putative TPR-repeat protein [Arabidopsis thaliana]
Length = 571
Score = 122 bits (305), Expect(3) = 7e-37
Identities = 55/72 (76%), Positives = 68/72 (94%)
Frame = -2
Query: 529 VQYFMKDHEKALETYREGLKLDPNHQELLDGIGKCMQQINKASRGDLTPEELKERQAKGM 350
VQ+FMK+++ A+ETY++GL+ DPN+QELLDG+ +C+QQINKA+RGDLTPEELKERQAKGM
Sbjct: 459 VQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQQINKANRGDLTPEELKERQAKGM 518
Query: 349 QDPEIQNILQDP 314
QDPEIQNIL DP
Sbjct: 519 QDPEIQNILTDP 530
Score = 37.7 bits (86), Expect(3) = 7e-37
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = -3
Query: 315 PVMRQVLVDFQENPKAAQDHAKN 247
PVMRQVL D QENP AAQ H +N
Sbjct: 530 PVMRQVLSDLQENPAAAQKHMQN 552
Score = 36.2 bits (82), Expect(3) = 7e-37
Identities = 16/19 (84%), Positives = 19/19 (99%)
Frame = -1
Query: 245 PMVMSKIQKLISAGIVQMK 189
PM+M+KIQKLIS+GIVQMK
Sbjct: 553 PMIMNKIQKLISSGIVQMK 571
>ref|NP_176461.1| TPR-repeat protein; protein id: At1g62740.1 [Arabidopsis thaliana]
Length = 571
Score = 122 bits (305), Expect(3) = 7e-37
Identities = 55/72 (76%), Positives = 68/72 (94%)
Frame = -2
Query: 529 VQYFMKDHEKALETYREGLKLDPNHQELLDGIGKCMQQINKASRGDLTPEELKERQAKGM 350
VQ+FMK+++ A+ETY++GL+ DPN+QELLDG+ +C+QQINKA+RGDLTPEELKERQAKGM
Sbjct: 459 VQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQQINKANRGDLTPEELKERQAKGM 518
Query: 349 QDPEIQNILQDP 314
QDPEIQNIL DP
Sbjct: 519 QDPEIQNILTDP 530
Score = 37.7 bits (86), Expect(3) = 7e-37
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = -3
Query: 315 PVMRQVLVDFQENPKAAQDHAKN 247
PVMRQVL D QENP AAQ H +N
Sbjct: 530 PVMRQVLSDLQENPAAAQKHMQN 552
Score = 36.2 bits (82), Expect(3) = 7e-37
Identities = 16/19 (84%), Positives = 19/19 (99%)
Frame = -1
Query: 245 PMVMSKIQKLISAGIVQMK 189
PM+M+KIQKLIS+GIVQMK
Sbjct: 553 PMIMNKIQKLISSGIVQMK 571
>ref|NP_172691.1| hypothetical protein; protein id: At1g12270.1, supported by cDNA:
gi_17473521 [Arabidopsis thaliana]
gi|25402717|pir||H86257 protein F5O11.2 [imported] -
Arabidopsis thaliana gi|8778620|gb|AAF79628.1|AC025416_2
F5O11.2 [Arabidopsis thaliana]
gi|17473522|gb|AAL38384.1| At1g12270/F5O11_1
[Arabidopsis thaliana] gi|23308495|gb|AAN18217.1|
At1g12270/F5O11_1 [Arabidopsis thaliana]
Length = 572
Score = 118 bits (295), Expect(3) = 3e-36
Identities = 53/72 (73%), Positives = 67/72 (92%)
Frame = -2
Query: 529 VQYFMKDHEKALETYREGLKLDPNHQELLDGIGKCMQQINKASRGDLTPEELKERQAKGM 350
VQ+F+K+++ A+ETY+ GL+ DP++QELLDG+ +C+QQINKA+RGDLTPEELKERQAKGM
Sbjct: 460 VQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKRCVQQINKANRGDLTPEELKERQAKGM 519
Query: 349 QDPEIQNILQDP 314
QDPEIQNIL DP
Sbjct: 520 QDPEIQNILTDP 531
Score = 38.1 bits (87), Expect(3) = 3e-36
Identities = 17/23 (73%), Positives = 18/23 (77%)
Frame = -3
Query: 315 PVMRQVLVDFQENPKAAQDHAKN 247
PVMRQVL D QENP AAQ H +N
Sbjct: 531 PVMRQVLSDLQENPSAAQKHMQN 553
Score = 37.7 bits (86), Expect(3) = 3e-36
Identities = 18/19 (94%), Positives = 19/19 (99%)
Frame = -1
Query: 245 PMVMSKIQKLISAGIVQMK 189
PMVM+KIQKLISAGIVQMK
Sbjct: 554 PMVMNKIQKLISAGIVQMK 572
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,469,165
Number of Sequences: 1393205
Number of extensions: 10733191
Number of successful extensions: 33541
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 32054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33488
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
