Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011659A_C01 KMC011659A_c01
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195284.1| putative protein; protein id: At4g35590.1 [Arab... 151 7e-36
ref|NP_173314.1| hypothetical protein; protein id: At1g18790.1 [... 97 2e-19
ref|NP_177588.1| hypothetical protein; protein id: At1g74480.1 [... 96 4e-19
ref|NP_201500.1| putative protein; protein id: At5g66990.1 [Arab... 94 1e-18
ref|NP_200116.1| putative protein; protein id: At5g53040.1 [Arab... 91 9e-18
>ref|NP_195284.1| putative protein; protein id: At4g35590.1 [Arabidopsis thaliana]
gi|7486642|pir||T04664 hypothetical protein F8D20.100 -
Arabidopsis thaliana gi|3367577|emb|CAA20029.1| putative
protein [Arabidopsis thaliana]
gi|7270510|emb|CAB80275.1| putative protein [Arabidopsis
thaliana]
Length = 370
Score = 151 bits (381), Expect = 7e-36
Identities = 79/116 (68%), Positives = 94/116 (80%), Gaps = 1/116 (0%)
Frame = -1
Query: 603 MPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMARPQELEDKAAAM 424
+ IVEASR L VGLTVLKKKCREFGIPRWPHRKIKSLD LIHDLQ A Q+ +++AAAM
Sbjct: 253 LTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAM 312
Query: 423 PVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRYRA-RAIEKQNSTVSSS 259
V K+Q+ LE+EK NI K+PF+EI ETKKFRQ+ FK+R+RA RA + Q S V+SS
Sbjct: 313 AVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASRAKKNQESLVTSS 368
>ref|NP_173314.1| hypothetical protein; protein id: At1g18790.1 [Arabidopsis
thaliana] gi|25518071|pir||G86321 F6A14.11 protein -
Arabidopsis thaliana
gi|6730706|gb|AAF27101.1|AC011809_10 Hypothetical
protein [Arabidopsis thaliana]
Length = 269
Score = 96.7 bits (239), Expect = 2e-19
Identities = 52/134 (38%), Positives = 81/134 (59%), Gaps = 2/134 (1%)
Frame = -1
Query: 603 MPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMAR--PQELEDKAA 430
MPI +A+R LN+GLT+LKK+CRE GI RWPHRK+ SL LI +++E+ + +E EDK
Sbjct: 139 MPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENEDK-- 196
Query: 429 AMPVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRYRARAIEKQNSTVSSS*YP 250
+ + LE EK+ IEK P ++ + +TK+ RQ FK ++ + ++ ++SS
Sbjct: 197 ---LRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRRSGMSTPITSSSSS 253
Query: 249 FQESKRNNHSFTSF 208
S + S + F
Sbjct: 254 ASASSSSYSSVSGF 267
>ref|NP_177588.1| hypothetical protein; protein id: At1g74480.1 [Arabidopsis
thaliana] gi|25406347|pir||G96773 hypothetical protein
F1M20.16 [imported] - Arabidopsis thaliana
gi|12324814|gb|AAG52376.1|AC011765_28 hypothetical
protein; 50498-49352 [Arabidopsis thaliana]
Length = 298
Score = 95.9 bits (237), Expect = 4e-19
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 3/117 (2%)
Frame = -1
Query: 603 MPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMARPQELEDKAAAM 424
MPI +A+ LNVGLT+LK++CRE GI RWPHRK+ SL++LI +++E+ Q++E + A
Sbjct: 146 MPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKEL---QKMEGEENAE 202
Query: 423 PVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFK---RRYRARAIEKQNSTVSS 262
+ +MLE EK IE P +E + +TK+ RQ FK +R + R+++ S V S
Sbjct: 203 KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSDQSQVPS 259
>ref|NP_201500.1| putative protein; protein id: At5g66990.1 [Arabidopsis thaliana]
gi|9758544|dbj|BAB08938.1|
gb|AAF27101.1~gene_id:K8A10.6~similar to unknown protein
[Arabidopsis thaliana]
Length = 277
Score = 94.4 bits (233), Expect = 1e-18
Identities = 45/110 (40%), Positives = 73/110 (65%)
Frame = -1
Query: 603 MPIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMARPQELEDKAAAM 424
MPI +A++ LN+G+T+LKK+CRE GIPRWPHRK+ SL++LI +L+++ + +
Sbjct: 170 MPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLL--GNTKGRTPKS 227
Query: 423 PVMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRYRARAIEKQNS 274
+ ++LE EK+ IE+ P +E +TK+ RQ FK +Y+ R + +S
Sbjct: 228 KLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277
>ref|NP_200116.1| putative protein; protein id: At5g53040.1 [Arabidopsis thaliana]
gi|8809593|dbj|BAA97144.1|
gb|AAF27101.1~gene_id:MNB8.10~similar to unknown protein
[Arabidopsis thaliana]
Length = 256
Score = 91.3 bits (225), Expect = 9e-18
Identities = 48/102 (47%), Positives = 65/102 (63%)
Frame = -1
Query: 600 PIVEASRRLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEMARPQELEDKAAAMP 421
PI++A++ LNVGLTVLKK+CRE GI RWPHRK+KSL+SLI +L+ + +E+
Sbjct: 160 PIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGMEEEV-------- 211
Query: 420 VMKRQKMLESEKENIEKQPFIEIQSETKKFRQDIFKRRYRAR 295
K LE + IE++P E+ TKK RQ FK Y+ R
Sbjct: 212 -----KNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRR 248
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 498,039,175
Number of Sequences: 1393205
Number of extensions: 10363647
Number of successful extensions: 32557
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 30962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32500
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
