Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011613A_C01 KMC011613A_c01
(643 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178443.1| unknown protein; protein id: At2g03440.1 [Arabi... 106 2e-22
ref|NP_563934.1| expressed protein; protein id: At1g13930.1, sup... 106 3e-22
gb|AAO42832.1| At2g03440 [Arabidopsis thaliana] 106 3e-22
gb|AAM62639.1| unknown [Arabidopsis thaliana] 103 3e-21
pir||S71562 drought-induced protein SDi-6 - common sunflower (fr... 100 2e-20
>ref|NP_178443.1| unknown protein; protein id: At2g03440.1 [Arabidopsis thaliana]
gi|25411006|pir||E84448 hypothetical protein At2g03440
[imported] - Arabidopsis thaliana
gi|4335755|gb|AAD17432.1| unknown protein [Arabidopsis
thaliana] gi|22531277|gb|AAM97142.1| unknown protein
[Arabidopsis thaliana]
Length = 187
Score = 106 bits (265), Expect = 2e-22
Identities = 61/132 (46%), Positives = 80/132 (60%), Gaps = 19/132 (14%)
Frame = -1
Query: 643 STSELLASAKVVSEASPAALRNESDQVDQAKAADAAGDLLDAASQYAKLDEQKGVGQYVD 464
+ +EL+ASAK+V+EA+ AA R+ESD++D+AK A A D+LDAAS+Y KLDE+ GVGQY++
Sbjct: 64 TNAELMASAKIVAEAAQAAARHESDKLDKAKVAGATADILDAASRYGKLDEKSGVGQYLE 123
Query: 463 KAADYLHDYKP-------------------GGAAPAPAPSKPEESQGEHAAQSAGGGGLG 341
KA YLH Y+ GG A APA K +E G GG G
Sbjct: 124 KAEQYLHKYETSHSHSSTGGTGSHGNVGGHGGGAGAPAAKKEDEKSG-------GGHGF- 175
Query: 340 GDFTKLAGGFFK 305
GD+ K+A GF K
Sbjct: 176 GDYAKMAQGFMK 187
>ref|NP_563934.1| expressed protein; protein id: At1g13930.1, supported by cDNA:
1505., supported by cDNA: gi_15010677, supported by
cDNA: gi_16323297 [Arabidopsis thaliana]
gi|25372939|pir||D86272 hypothetical protein F7A19.2
[imported] - Arabidopsis thaliana
gi|5080769|gb|AAD39279.1|AC007576_2 Unknown protein
[Arabidopsis thaliana]
gi|8778391|gb|AAF79399.1|AC068197_9 F16A14.14
[Arabidopsis thaliana] gi|15010678|gb|AAK73998.1|
At1g13930/F16A14.27 [Arabidopsis thaliana]
gi|16323298|gb|AAL15404.1| At1g13930/F16A14.27
[Arabidopsis thaliana]
Length = 155
Score = 106 bits (264), Expect = 3e-22
Identities = 61/121 (50%), Positives = 80/121 (65%), Gaps = 8/121 (6%)
Frame = -1
Query: 643 STSELLASAKVVSEASPAALRNESDQVDQAKAADAAGDLLDAASQYAKLDEQKGVGQYVD 464
+ +EL+ASAKVV+EA+ AA RNESD++D+ K A A+ D+LDAA +Y K DE+ GQY+D
Sbjct: 36 TNAELMASAKVVAEAAQAAARNESDKLDKGKVAGASADILDAAEKYGKFDEKSSTGQYLD 95
Query: 463 KAADYLHDYK----PGGAAPAPAPSKPE-ESQGEHAAQ---SAGGGGLGGDFTKLAGGFF 308
KA YL+DY+ G P P S+ E SQ E AA+ GGGLGG + K+A GF
Sbjct: 96 KAEKYLNDYESSHSTGAGGPPPPTSQAEPASQPEPAAKKDDEESGGGLGG-YAKMAQGFL 154
Query: 307 K 305
K
Sbjct: 155 K 155
>gb|AAO42832.1| At2g03440 [Arabidopsis thaliana]
Length = 187
Score = 106 bits (264), Expect = 3e-22
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 19/132 (14%)
Frame = -1
Query: 643 STSELLASAKVVSEASPAALRNESDQVDQAKAADAAGDLLDAASQYAKLDEQKGVGQYVD 464
+ +EL+ASAK+++EA+ AA R+ESD++D+AK A A D+LDAAS+Y KLDE+ GVGQY++
Sbjct: 64 TNAELMASAKIIAEAAQAAARHESDKLDKAKVAGATADILDAASRYGKLDEKSGVGQYLE 123
Query: 463 KAADYLHDYKP-------------------GGAAPAPAPSKPEESQGEHAAQSAGGGGLG 341
KA YLH Y+ GG A APA K +E G GG G
Sbjct: 124 KAEQYLHKYETSHSHSSTGGTGSHGNVGGHGGGAGAPAAKKEDEKSG-------GGHGF- 175
Query: 340 GDFTKLAGGFFK 305
GD+ K+A GF K
Sbjct: 176 GDYAKMAQGFMK 187
>gb|AAM62639.1| unknown [Arabidopsis thaliana]
Length = 155
Score = 103 bits (256), Expect = 3e-21
Identities = 59/121 (48%), Positives = 79/121 (64%), Gaps = 8/121 (6%)
Frame = -1
Query: 643 STSELLASAKVVSEASPAALRNESDQVDQAKAADAAGDLLDAASQYAKLDEQKGVGQYVD 464
+ +EL+ASAKVV+EA+ AA RNESD++D+ K A A+ D+LDA+ +Y K DE+ G Y+D
Sbjct: 36 TNAELMASAKVVAEAAQAAARNESDKLDKGKVAGASADILDASEKYGKFDEKSSTGHYLD 95
Query: 463 KAADYLHDYK----PGGAAPAPAPSKPE-ESQGEHAAQ---SAGGGGLGGDFTKLAGGFF 308
KA YL+DY+ G P P S+ E SQ E AA+ GGGLGG + K+A GF
Sbjct: 96 KAEKYLNDYESSHSTGAGGPPPPTSQAEPASQPEPAAKKDDEESGGGLGG-YAKMAQGFL 154
Query: 307 K 305
K
Sbjct: 155 K 155
>pir||S71562 drought-induced protein SDi-6 - common sunflower (fragment)
Length = 168
Score = 100 bits (248), Expect = 2e-20
Identities = 56/125 (44%), Positives = 79/125 (62%), Gaps = 12/125 (9%)
Frame = -1
Query: 643 STSELLASAKVVSEASPAALRNESDQVDQAKAADAAGDLLDAASQYAKLDEQKGVGQYVD 464
++++LL+SAK+V+EA+ +A N++DQ+D+ K A A DLLD++ +Y K DE +GVGQY+
Sbjct: 44 TSTDLLSSAKLVAEAAQSAATNKTDQIDKQKVAGATADLLDSSKEYGKFDESQGVGQYIK 103
Query: 463 KAADYLHDYKPGGAA----PAPAPSKPEESQGE--HAAQSAGG-----GGLG-GDFTKLA 320
+A DYLH Y+ GA PA AP EE + E + GG G+G GD K A
Sbjct: 104 QADDYLHKYEKSGATGATPPAEAPLVTEEKKAEAPPGVEEKGGKDESESGIGAGDAIKAA 163
Query: 319 GGFFK 305
G FFK
Sbjct: 164 GSFFK 168
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 552,238,625
Number of Sequences: 1393205
Number of extensions: 13426490
Number of successful extensions: 76967
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 53672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71901
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
