Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011537A_C01 KMC011537A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567340.1| nitrilase 1 like protein; protein id: At4g08790... 149 2e-35
pir||D85088 nitrilase 1 like protein [imported] - Arabidopsis th... 143 1e-33
ref|NP_595500.1| putitive nitrilase homolog [Schizosaccharomyces... 105 3e-22
ref|NP_760368.1| Predicted amidohydrolase [Vibrio vulnificus CMC... 104 7e-22
ref|NP_499556.1| Nitrilase and fragile histidine triad fusion pr... 102 3e-21
>ref|NP_567340.1| nitrilase 1 like protein; protein id: At4g08790.1, supported by
cDNA: gi_13926306 [Arabidopsis thaliana]
gi|13926307|gb|AAK49620.1|AF372904_1
AT4g08790/T32A17_100 [Arabidopsis thaliana]
gi|22137058|gb|AAM91374.1| At4g08790/T32A17_100
[Arabidopsis thaliana]
Length = 307
Score = 149 bits (377), Expect = 2e-35
Identities = 74/86 (86%), Positives = 76/86 (88%)
Frame = -3
Query: 528 EAHWEILLRARAIESQCYVIAAAQAGIHNEKRESYGDTLIIDPWGTVVSRLPDRSSTGFA 349
EAHWEILLRARAIE+QCYVIAAAQAG HNEKRESYGDTLIIDPWGTVV RLPDR STG
Sbjct: 221 EAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDTLIIDPWGTVVGRLPDRVSTGIV 280
Query: 348 VADIDLSLVDSVREKMPIAKQRKPID 271
VADID SL+DSVR KMPI KQR ID
Sbjct: 281 VADIDFSLIDSVRTKMPIDKQRVSID 306
>pir||D85088 nitrilase 1 like protein [imported] - Arabidopsis thaliana
gi|7267521|emb|CAB78004.1| nitrilase 1 like protein
[Arabidopsis thaliana] gi|7321068|emb|CAB82115.1|
nitrilase 1 like protein [Arabidopsis thaliana]
Length = 316
Score = 143 bits (360), Expect = 1e-33
Identities = 70/80 (87%), Positives = 72/80 (89%)
Frame = -3
Query: 528 EAHWEILLRARAIESQCYVIAAAQAGIHNEKRESYGDTLIIDPWGTVVSRLPDRSSTGFA 349
EAHWEILLRARAIE+QCYVIAAAQAG HNEKRESYGDTLIIDPWGTVV RLPDR STG
Sbjct: 221 EAHWEILLRARAIETQCYVIAAAQAGKHNEKRESYGDTLIIDPWGTVVGRLPDRVSTGIV 280
Query: 348 VADIDLSLVDSVREKMPIAK 289
VADID SL+DSVR KMPI K
Sbjct: 281 VADIDFSLIDSVRTKMPIDK 300
>ref|NP_595500.1| putitive nitrilase homolog [Schizosaccharomyces pombe]
gi|7493239|pir||T40601 putitive nitrilase homolog -
fission yeast (Schizosaccharomyces pombe)
gi|4467274|emb|CAB37598.1| putitive nitrilase homolog
[Schizosaccharomyces pombe]
Length = 276
Score = 105 bits (262), Expect = 3e-22
Identities = 49/81 (60%), Positives = 64/81 (78%), Gaps = 1/81 (1%)
Frame = -3
Query: 525 AHWEILLRARAIESQCYVIAAAQAGIHNEKRESYGDTLIIDPWGTVVSRLPDRSS-TGFA 349
AHWE+LLRARA++SQCYVIA AQ G HNEKR SYG ++I+DPWGTV+++ D SS G
Sbjct: 189 AHWEVLLRARALDSQCYVIAPAQGGKHNEKRASYGHSMIVDPWGTVIAQYSDISSPNGLI 248
Query: 348 VADIDLSLVDSVREKMPIAKQ 286
AD+DL+LVD VR +P+ ++
Sbjct: 249 FADLDLNLVDHVRTYIPLLRR 269
>ref|NP_760368.1| Predicted amidohydrolase [Vibrio vulnificus CMCP6]
gi|27360985|gb|AAO09895.1|AE016801_214 Predicted
amidohydrolase [Vibrio vulnificus CMCP6]
Length = 274
Score = 104 bits (259), Expect = 7e-22
Identities = 47/83 (56%), Positives = 66/83 (78%)
Frame = -3
Query: 528 EAHWEILLRARAIESQCYVIAAAQAGIHNEKRESYGDTLIIDPWGTVVSRLPDRSSTGFA 349
EAHWEILLRARAIE+QC+VIAAAQ G+H+ RE++G +++IDPWG VV++LP +
Sbjct: 185 EAHWEILLRARAIENQCWVIAAAQGGMHSASRETWGHSMVIDPWGKVVAQLPQQGD--LL 242
Query: 348 VADIDLSLVDSVREKMPIAKQRK 280
+A+IDL+L D++R KMP+ K +
Sbjct: 243 LAEIDLALSDTIRRKMPVVKHSR 265
>ref|NP_499556.1| Nitrilase and fragile histidine triad fusion protein NitFhiT 1
(49.9 kD) (nft-1) [Caenorhabditis elegans]
gi|11359793|pir||T43198 nitrilase/Fhit protein -
Caenorhabditis elegans gi|9955180|pdb|1EMS|A Chain A,
Crystal Structure Of The C. Elegans Nitfhit Protein
gi|9955181|pdb|1EMS|B Chain B, Crystal Structure Of The
C. Elegans Nitfhit Protein gi|3228664|gb|AAC39136.1|
nitrilase and fragile histidine triad fusion protein
NitFhit [Caenorhabditis elegans]
gi|6425404|emb|CAB60517.1| C. elegans NFT-1 protein
(corresponding sequence Y56A3A.13) [Caenorhabditis
elegans]
Length = 440
Score = 102 bits (254), Expect = 3e-21
Identities = 47/82 (57%), Positives = 62/82 (75%)
Frame = -3
Query: 525 AHWEILLRARAIESQCYVIAAAQAGIHNEKRESYGDTLIIDPWGTVVSRLPDRSSTGFAV 346
AHWE LLRARAIE+QCYV+AAAQ G HN KR+SYG ++++DPWG VV++ +R F
Sbjct: 202 AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSERVDMCF-- 259
Query: 345 ADIDLSLVDSVREKMPIAKQRK 280
A+IDLS VD++RE P+ R+
Sbjct: 260 AEIDLSYVDTLREMQPVFSHRR 281
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,662,063
Number of Sequences: 1393205
Number of extensions: 8371840
Number of successful extensions: 19442
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 18630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19376
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
