Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011535A_C01 KMC011535A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187031.1| putative auxin-independent growth promoter prot... 58 6e-08
emb|CAA19676.1| EG:155E2.3 [Drosophila melanogaster] gi|4157973|... 35 0.52
dbj|BAC45044.1| OJ1417_E01.6 [Oryza sativa (japonica cultivar-gr... 32 3.4
ref|NP_476716.2| shaggy CG2621-PD gi|22831595|gb|AAF45801.2| CG2... 32 3.4
sp|P18431|SGG_DROME Protein kinase shaggy (Protein zeste-white 3... 32 3.4
>ref|NP_187031.1| putative auxin-independent growth promoter protein; protein id:
At3g03810.1 [Arabidopsis thaliana]
gi|6006861|gb|AAF00637.1|AC009540_14 putative
auxin-independent growth promoter protein [Arabidopsis
thaliana]
Length = 638
Score = 58.2 bits (139), Expect = 6e-08
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = -1
Query: 520 FLYGGEDICPYWMQHAKEAGSLAKESAQSEDDGLPDYESHDFLNE-SEDDKNGGKINQTS 344
FLYGGED CP W++ A E ++++D PDY+ HD L E SE ++ K S
Sbjct: 574 FLYGGEDECPKWIKSA------GVEKSKTDDGDQPDYD-HDLLAEQSETEEEFAKSKVAS 626
Query: 343 LWEQDEEMDPND 308
++QDEE DPND
Sbjct: 627 AFDQDEEWDPND 638
>emb|CAA19676.1| EG:155E2.3 [Drosophila melanogaster] gi|4157973|emb|CAA22520.1|
EG:155E2.3 [Drosophila melanogaster]
gi|6691827|emb|CAB65860.1| EG:155E2.3 [Drosophila
melanogaster]
Length = 1066
Score = 35.0 bits (79), Expect = 0.52
Identities = 22/67 (32%), Positives = 34/67 (49%)
Frame = -1
Query: 502 DICPYWMQHAKEAGSLAKESAQSEDDGLPDYESHDFLNESEDDKNGGKINQTSLWEQDEE 323
DIC + GS +E + EDDG+ + + + D+++G IN S EQ+EE
Sbjct: 235 DICDDDDVDCDDRGSEIEEEEEEEDDGVNVDDDVEEADNQSDNQSGIIINLKSQTEQEEE 294
Query: 322 MDPND*K 302
+D D K
Sbjct: 295 VDEVDAK 301
>dbj|BAC45044.1| OJ1417_E01.6 [Oryza sativa (japonica cultivar-group)]
Length = 388
Score = 32.3 bits (72), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 466 AGSLAKESAQSEDDGLPDYESHDFLNESEDDKNGG 362
AG++ SAQ + DG PD HD + D++GG
Sbjct: 165 AGTMGSSSAQVQGDGAPDNHDHDPRHLPRQDQSGG 199
>ref|NP_476716.2| shaggy CG2621-PD gi|22831595|gb|AAF45801.2| CG2621-PD [Drosophila
melanogaster]
Length = 1067
Score = 32.3 bits (72), Expect = 3.4
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 502 DICPYWMQHAKEAGS-LAKESAQSEDDGLPDYESHDFLNESEDDKNGGKINQTSLWEQDE 326
DIC + GS + +E + EDDG+ + + + D+++G IN S EQ+E
Sbjct: 235 DICDDDDVDCDDRGSEIEEEEEEEEDDGVNVDDDVEEADNQSDNQSGIIINLKSQTEQEE 294
Query: 325 EMDPND*K 302
E+D D K
Sbjct: 295 EVDEVDAK 302
>sp|P18431|SGG_DROME Protein kinase shaggy (Protein zeste-white 3) gi|422489|pir||S35423
protein kinase sgg46 (EC 2.7.1.-) - fruit fly
(Drosophila melanogaster) gi|11148|emb|CAA50214.1|
protein kinase; sgg46 protein kinase [Drosophila
melanogaster]
Length = 1067
Score = 32.3 bits (72), Expect = 3.4
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 502 DICPYWMQHAKEAGS-LAKESAQSEDDGLPDYESHDFLNESEDDKNGGKINQTSLWEQDE 326
DIC + GS + +E + EDDG+ + + + D+++G IN S EQ+E
Sbjct: 235 DICDDDDVDCDDRGSEIEEEEEEEEDDGVNVDDDVEEADNQSDNQSGIIINLKSQTEQEE 294
Query: 325 EMDPND*K 302
E+D D K
Sbjct: 295 EVDEVDAK 302
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,206,415
Number of Sequences: 1393205
Number of extensions: 10311272
Number of successful extensions: 29915
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 27744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29711
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
