Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011421A_C01 KMC011421A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176631.1| peptide transporter, putative; protein id: At1g... 206 2e-52
gb|AAL36338.1| putative peptide transporter protein [Arabidopsis... 203 1e-51
dbj|BAA92911.1| unnamed protein product [Oryza sativa (japonica ... 172 2e-42
ref|NP_196007.1| putative protein; protein id: At5g03870.1 [Arab... 167 1e-40
ref|NP_174553.1| unknown protein; protein id: At1g32760.1 [Arabi... 163 2e-39
>ref|NP_176631.1| peptide transporter, putative; protein id: At1g64500.1, supported
by cDNA: gi_15810442, supported by cDNA: gi_17381051
[Arabidopsis thaliana] gi|25342046|pir||G96668 protein
F1N19.7 [imported] - Arabidopsis thaliana
gi|6633811|gb|AAF19670.1|AC009519_4 F1N19.7 [Arabidopsis
thaliana] gi|15810443|gb|AAL07109.1| putative peptide
transporter protein [Arabidopsis thaliana]
gi|27754251|gb|AAO22579.1| putative peptide transporter
protein [Arabidopsis thaliana]
Length = 368
Score = 206 bits (524), Expect = 2e-52
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 5/172 (2%)
Frame = -3
Query: 546 DPLSQFPEKSPPGGADAVVIYTTSLRGVRKTFEDCNRAREVLEGHRVVVDERDVALHSGF 367
DPL +FPEK PPGG + +++YTTSL+GVR+T+EDC R R ++E VVVDERDV+L +G
Sbjct: 197 DPLREFPEKCPPGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGV 256
Query: 366 LKEVKELLAEEVVVAVAPLPRVFVKGRYLGGLEELVELNESGRLGRILNATRVER--GVG 193
L E+KELL +E +VAP PRVFVKGRYLGG E+ +NE+G+LGR+L RVER G
Sbjct: 257 LSELKELLQDE--ASVAP-PRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVERVGEEG 313
Query: 192 RYGCDGCGGARFVPCLDCGGSCKLV---LSDVNQIERCPKCNENGLVHCPAC 46
R C+GCGGAR++PC +CGGSCK+ + + ERC KCNENGL+ CP C
Sbjct: 314 RLTCEGCGGARWLPCFECGGSCKVAAVGAAKGERWERCVKCNENGLIRCPVC 365
>gb|AAL36338.1| putative peptide transporter protein [Arabidopsis thaliana]
Length = 368
Score = 203 bits (517), Expect = 1e-51
Identities = 99/172 (57%), Positives = 127/172 (73%), Gaps = 5/172 (2%)
Frame = -3
Query: 546 DPLSQFPEKSPPGGADAVVIYTTSLRGVRKTFEDCNRAREVLEGHRVVVDERDVALHSGF 367
DPL +FPEK PPGG + +++YTTSL+GVR+T+EDC R R ++E VVVDERDV+L +G
Sbjct: 197 DPLREFPEKCPPGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGV 256
Query: 366 LKEVKELLAEEVVVAVAPLPRVFVKGRYLGGLEELVELNESGRLGRILNATRVER--GVG 193
L E+KELL +E +VAP PRVFVKGRYLGG E+ +NE+G+LGR+L RV R G
Sbjct: 257 LSELKELLQDE--ASVAP-PRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVVRVGEEG 313
Query: 192 RYGCDGCGGARFVPCLDCGGSCKLV---LSDVNQIERCPKCNENGLVHCPAC 46
R C+GCGGAR++PC +CGGSCK+ + + ERC KCNENGL+ CP C
Sbjct: 314 RLTCEGCGGARWLPCFECGGSCKVAAVGAAKGERWERCVKCNENGLIRCPVC 365
>dbj|BAA92911.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 391
Score = 172 bits (437), Expect = 2e-42
Identities = 95/189 (50%), Positives = 119/189 (62%), Gaps = 20/189 (10%)
Frame = -3
Query: 552 RRDPLSQFPEKSPPGGADA-VVIYTTSLRGVRKTFEDCNRAREVLE----------GHRV 406
RRDP +PE+ PPG + VV+YTT+LRGVR+TFEDC RAR+ +E G V
Sbjct: 208 RRDPFEGYPERRPPGASGGGVVLYTTTLRGVRRTFEDCERARKAVEACAEAVSAAGGSPV 267
Query: 405 VVDERDVALHSGFLKEVKELLAEEVVVAVAPLPRVFVKGRYLGGLEELVELNESGRLGRI 226
VVDERDV+LH +L+E++ L AP PR+FV GRYLGG + EL ESG+L +
Sbjct: 268 VVDERDVSLHGEYLRELRGLAG----AGDAP-PRLFVMGRYLGGADACAELAESGKLREM 322
Query: 225 LNATRVERGV-----GRYGCDGCGGARFVPCLDCGGSCKLVLSDVN----QIERCPKCNE 73
+ R GR GC+GCGGARFVPC +CGGSCK+V + +ERC KCNE
Sbjct: 323 MRWARARGEACAAKDGR-GCEGCGGARFVPCWECGGSCKVVAAGATAAAADVERCAKCNE 381
Query: 72 NGLVHCPAC 46
NGL+ CP C
Sbjct: 382 NGLMLCPIC 390
>ref|NP_196007.1| putative protein; protein id: At5g03870.1 [Arabidopsis thaliana]
gi|11280867|pir||T48414 hypothetical protein F8F6.80 -
Arabidopsis thaliana gi|7406397|emb|CAB85507.1| putative
protein [Arabidopsis thaliana]
gi|9758016|dbj|BAB08613.1|
emb|CAB85507.1~gene_id:MED24.17~strong similarity to
unknown protein [Arabidopsis thaliana]
Length = 384
Score = 167 bits (422), Expect = 1e-40
Identities = 81/166 (48%), Positives = 110/166 (65%)
Frame = -3
Query: 540 LSQFPEKSPPGGADAVVIYTTSLRGVRKTFEDCNRAREVLEGHRVVVDERDVALHSGFLK 361
L +FPEK PPGG +VVIY T+LRG+RKTFEDCN R +L+ H V ERDV++HS F +
Sbjct: 224 LEKFPEKCPPGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKE 283
Query: 360 EVKELLAEEVVVAVAPLPRVFVKGRYLGGLEELVELNESGRLGRILNATRVERGVGRYGC 181
E++ ++ + V +P VFVKGR +G +EE++ L E G+LG +L R +G C
Sbjct: 284 EIRGIMGTKHV----KIPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAAR-LGGSCC 338
Query: 180 DGCGGARFVPCLDCGGSCKLVLSDVNQIERCPKCNENGLVHCPACA 43
GCGG RF+ C+ C GSCK+ + + +C KCNENGLV CP C+
Sbjct: 339 RGCGGMRFMMCVVCNGSCKVREEEKKSMVKCLKCNENGLVLCPICS 384
>ref|NP_174553.1| unknown protein; protein id: At1g32760.1 [Arabidopsis thaliana]
gi|6714276|gb|AAF25972.1|AC017118_9 F6N18.14
[Arabidopsis thaliana]
Length = 314
Score = 163 bits (412), Expect = 2e-39
Identities = 93/192 (48%), Positives = 120/192 (62%), Gaps = 10/192 (5%)
Frame = -3
Query: 588 KKEESE------SVYERLRR-DP-LSQFPEKSPPGGADAVVIYTTSLRGVRKTFEDCNRA 433
KKE S+ + YE L+ DP L++ E+ GG + VVIYTTSLRGVR+TFE CN
Sbjct: 124 KKENSDPNLKNPNDYEVLKPLDPKLAEESERLCDGGENRVVIYTTSLRGVRRTFEACNAV 183
Query: 432 REVLEGHRVVVDERDVALHSGFLKEVKELLAEEVVVAVAPLPRVFVKGRYLGGLEELVEL 253
R +E VVV ERDV++ GF +E+ L+A E AV P PRVFVKG+Y+GG EE++ L
Sbjct: 184 RAAIESFGVVVCERDVSMDRGFREELSNLMAVESTAAVLP-PRVFVKGKYIGGAEEVMRL 242
Query: 252 NESGRLGRILNATRVERGVGRYGCDGCGGARFVPCLDCGGSCKLVLSDVNQ--IERCPKC 79
E G LG +L ++ GC GCGG F+PC C GSCK+V N + +C +C
Sbjct: 243 VEEGLLGELLKEIPRKKDRCGGGCGGCGGLAFLPCSGCNGSCKVVEGWGNDAVVVKCKEC 302
Query: 78 NENGLVHCPACA 43
NENGLV CP C+
Sbjct: 303 NENGLVRCPICS 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 660,232,584
Number of Sequences: 1393205
Number of extensions: 22397639
Number of successful extensions: 810866
Number of sequences better than 10.0: 20425
Number of HSP's better than 10.0 without gapping: 148088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394671
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
