>KMC011410A_C01 KMC011410A_c01
catggtaaatcttcttataggaggATTGAACATTAATAGCACTGGGCAAAAATTCAACTC
AAATTTTCAGCAGAAATAAAAGTAGCATTGAATTCCACGGTTCTCAAACATGATACAAAG
AATAATTGAGAGGATACCGCTCTATTTCTTCCAACAGGACACATATATTATAACATCCAC
CGATAATTAGTAACGCCTAGTTAGAACTTATCTTTCTGTGTTCTCCCGGGTTCTGTCTAT
GAATCACTTTCTCCTGCAGAAAAAGCATGGCTGATTGGGTAGCTATGTGCTTGCTACTAG
TTTAATGTCTTGTGATATGCAACAGATGTTGAAGTCTTCAGCAGCTCTCTTATCGCCATT
GTTGCATAACAGGAAGAAGGAAGAGTAAAGCTCAATTTGAGAGCTATTGGGGAGTTTTGA
GACCTCAAGTCACCAGCAGATTCATCAGGAGGTAATATCACCTCCTCACCTACAATCTCA
TTATAATCATTTTCAACCTTGGnACCATCATCAGAGCTCTCTAACTGTGTCGTGCTAACA
AAGTTTTCTTCCTTTTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC011410A_C01 KMC011410A_c01
         (557 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187133.1| unknown protein; protein id: At3g04820.1 [Arabi...    59  4e-08
dbj|BAB89856.1| P0695H10.16 [Oryza sativa (japonica cultivar-gro...    52  5e-06
ref|XP_131931.1| RIKEN cDNA C330017I15 [Mus musculus]                  43  0.002
ref|NP_061915.1| hypothetical protein; KIAA1897 protein [Homo sa...    43  0.002
gb|AAH08544.1| Similar to hypothetical protein [Mus musculus]          43  0.002

>ref|NP_187133.1| unknown protein; protein id: At3g04820.1 [Arabidopsis thaliana]
           gi|12322858|gb|AAG51420.1|AC009465_20 unknown protein;
           78996-83414 [Arabidopsis thaliana]
          Length = 699

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 33/72 (45%), Positives = 45/72 (61%)
 Frame = -1

Query: 533 TTQLESSDDGXKVENDYNEIVGEEVILPPDESAGDLRSQNSPIALKLSFTLPSSCYATMA 354
           T   +S +   K + D NE          ++  G+  S+ + +ALK++ TLPSSCYATMA
Sbjct: 615 TNPHDSGETNLKDQTDSNEA---------EKDTGNPDSEQTQMALKMALTLPSSCYATMA 665

Query: 353 IRELLKTSTSVA 318
           IRELLKTSTSV+
Sbjct: 666 IRELLKTSTSVS 677

>dbj|BAB89856.1| P0695H10.16 [Oryza sativa (japonica cultivar-group)]
           gi|21743254|dbj|BAC03252.1| P0490D09.4 [Oryza sativa
           (japonica cultivar-group)]
          Length = 606

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 30/67 (44%), Positives = 43/67 (63%), Gaps = 1/67 (1%)
 Frame = -1

Query: 518 SSDDGXKVENDYNEIV-GEEVILPPDESAGDLRSQNSPIALKLSFTLPSSCYATMAIREL 342
           S D G +   D +E + G  +++   +S G        +A+KL+FTLP+S YATMAIREL
Sbjct: 459 SHDSGLEASLDASESINGASLVVAEAKSIGS-SDMLEKLAIKLAFTLPASSYATMAIREL 517

Query: 341 LKTSTSV 321
           +KTSTS+
Sbjct: 518 MKTSTSL 524

>ref|XP_131931.1| RIKEN cDNA C330017I15 [Mus musculus]
          Length = 259

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -1

Query: 404 ALKLSFTLPSSCYATMAIRELLKTSTSVAYHKTLN 300
           ALK+ F+LP S YATMAIRE+LK  TS+     LN
Sbjct: 220 ALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 254

>ref|NP_061915.1| hypothetical protein; KIAA1897 protein [Homo sapiens]
           gi|7020619|dbj|BAA91203.1| unnamed protein product [Homo
           sapiens] gi|13528816|gb|AAH05209.1|AAH05209 hypothetical
           protein [Homo sapiens]
           gi|15277464|gb|AAH11396.1|AAH11396 Unknown (protein for
           MGC:17720) [Homo sapiens]
          Length = 205

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -1

Query: 404 ALKLSFTLPSSCYATMAIRELLKTSTSVAYHKTLN 300
           ALK+ F+LP S YATMAIRE+LK  TS+     LN
Sbjct: 166 ALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 200

>gb|AAH08544.1| Similar to hypothetical protein [Mus musculus]
          Length = 205

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = -1

Query: 404 ALKLSFTLPSSCYATMAIRELLKTSTSVAYHKTLN 300
           ALK+ F+LP S YATMAIRE+LK  TS+     LN
Sbjct: 166 ALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 200

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,740,200
Number of Sequences: 1393205
Number of extensions: 8320807
Number of successful extensions: 16936
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 16384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16885
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPD018e05_f AV771247 1 399 2 MFBL032g08_f BP042883 18 493 3 SPDL032f03_f BP054004 52 557

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