Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011372A_C01 KMC011372A_c01
(524 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM63236.1| putative mitochondrial dicarboxylate carrier prot... 100 1e-20
gb|AAK44155.1|AF370340_1 putative mitochondrial dicarboxylate ca... 99 4e-20
ref|NP_179836.1| mitochondrial carrier protein family; protein i... 99 4e-20
ref|NP_194188.1| mitochondrial carrier protein family; protein i... 91 1e-17
emb|CAB71010.1| mitochondrial uncoupling protein [Arabidopsis th... 91 1e-17
>gb|AAM63236.1| putative mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana]
Length = 313
Score = 100 bits (248), Expect = 1e-20
Identities = 46/57 (80%), Positives = 52/57 (90%)
Frame = -3
Query: 519 GAAPPYSGAIDCALKTVRAEGPMALYKGFIPTISRQGPFPVVLFVTLEQVRKLLKDF 349
G APPY GA+DCALKTV+AEG M+LYKGFIPT+SRQ PF VVLFVTLEQV+KLLKD+
Sbjct: 255 GVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFTVVLFVTLEQVKKLLKDY 311
>gb|AAK44155.1|AF370340_1 putative mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana]
Length = 313
Score = 98.6 bits (244), Expect = 4e-20
Identities = 45/57 (78%), Positives = 51/57 (88%)
Frame = -3
Query: 519 GAAPPYSGAIDCALKTVRAEGPMALYKGFIPTISRQGPFPVVLFVTLEQVRKLLKDF 349
G APPY GA+DCALKTV+AEG M+LYKGFIPT+SRQ PF VVLFVTLEQV+KL KD+
Sbjct: 255 GVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFTVVLFVTLEQVKKLFKDY 311
>ref|NP_179836.1| mitochondrial carrier protein family; protein id: At2g22500.1,
supported by cDNA: 20723., supported by cDNA:
gi_13877658, supported by cDNA: gi_13878154 [Arabidopsis
thaliana] gi|25295876|pir||D84613 hypothetical protein
At2g22500 [imported] - Arabidopsis thaliana
gi|4544443|gb|AAD22351.1| putative mitochondrial
dicarboxylate carrier protein [Arabidopsis thaliana]
gi|13877659|gb|AAK43907.1|AF370588_1 putative
mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana] gi|23297154|gb|AAN13106.1| putative
mitochondrial dicarboxylate carrier protein [Arabidopsis
thaliana]
Length = 313
Score = 98.6 bits (244), Expect = 4e-20
Identities = 45/57 (78%), Positives = 51/57 (88%)
Frame = -3
Query: 519 GAAPPYSGAIDCALKTVRAEGPMALYKGFIPTISRQGPFPVVLFVTLEQVRKLLKDF 349
G APPY GA+DCALKTV+AEG M+LYKGFIPT+SRQ PF VVLFVTLEQV+KL KD+
Sbjct: 255 GVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFTVVLFVTLEQVKKLFKDY 311
>ref|NP_194188.1| mitochondrial carrier protein family; protein id: At4g24570.1,
supported by cDNA: 119476., supported by cDNA:
gi_14596142 [Arabidopsis thaliana]
gi|7488415|pir||T05577 uncoupling protein homolog
F22K18.230 - Arabidopsis thaliana
gi|4220533|emb|CAA23006.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
gi|7269307|emb|CAB79367.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
gi|14596143|gb|AAK68799.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
gi|21537077|gb|AAM61418.1| putative mitochondrial
uncoupling protein [Arabidopsis thaliana]
Length = 313
Score = 90.5 bits (223), Expect = 1e-17
Identities = 42/52 (80%), Positives = 47/52 (89%)
Frame = -3
Query: 504 YSGAIDCALKTVRAEGPMALYKGFIPTISRQGPFPVVLFVTLEQVRKLLKDF 349
Y GA DCA+KTV+AEG MALYKGF+PT+ RQGPF VVLFVTLEQVRKLL+DF
Sbjct: 262 YDGAWDCAVKTVKAEGAMALYKGFVPTVCRQGPFTVVLFVTLEQVRKLLRDF 313
>emb|CAB71010.1| mitochondrial uncoupling protein [Arabidopsis thaliana]
Length = 69
Score = 90.5 bits (223), Expect = 1e-17
Identities = 42/52 (80%), Positives = 47/52 (89%)
Frame = -3
Query: 504 YSGAIDCALKTVRAEGPMALYKGFIPTISRQGPFPVVLFVTLEQVRKLLKDF 349
Y GA DCA+KTV+AEG MALYKGF+PT+ RQGPF VVLFVTLEQVRKLL+DF
Sbjct: 18 YDGAWDCAVKTVKAEGAMALYKGFVPTVCRQGPFTVVLFVTLEQVRKLLRDF 69
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,291,497
Number of Sequences: 1393205
Number of extensions: 8783637
Number of successful extensions: 34224
Number of sequences better than 10.0: 499
Number of HSP's better than 10.0 without gapping: 33012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34217
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
