Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011253A_C01 KMC011253A_c01
(514 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC39054.1| putative protein kinase [Oryza sativa] 111 4e-24
ref|NP_182010.2| putative protein kinase; protein id: At2g44830.... 108 3e-23
gb|AAL84933.1| At2g44830/T13E15.16 [Arabidopsis thaliana] 108 3e-23
pir||T00410 protein kinase homolog T13E15.16 - Arabidopsis thali... 108 3e-23
gb|AAK31277.1|AC079890_13 putative protein kinase [Oryza sativa] 90 2e-17
>emb|CAC39054.1| putative protein kinase [Oryza sativa]
Length = 609
Score = 111 bits (278), Expect = 4e-24
Identities = 56/81 (69%), Positives = 63/81 (77%)
Frame = -1
Query: 499 RLGMKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESDLPAKFEAVDNTVGVGNYNSK 320
RLG+KRGA EIKQHPFFEGVNWALIRCSTPPEVPR VE++LPAK+ V V G K
Sbjct: 532 RLGVKRGAAEIKQHPFFEGVNWALIRCSTPPEVPRHVEAELPAKY-GVAEPVASGGGGGK 590
Query: 319 RMVGNNDMIKSGGNYLDFEFF 257
R+VG ++SGG YLDFEFF
Sbjct: 591 RVVGAE--VRSGGKYLDFEFF 609
>ref|NP_182010.2| putative protein kinase; protein id: At2g44830.1, supported by
cDNA: gi_19310386 [Arabidopsis thaliana]
Length = 765
Score = 108 bits (271), Expect = 3e-23
Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 6/89 (6%)
Frame = -1
Query: 505 RTRLGMKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESDLPAKFEAVDNTVGVGNYN 326
+ RLG KRGATEIKQHPFFEGVNWALIRCSTPPEVPR +E++ P K+ +D VG G+ N
Sbjct: 679 KNRLGTKRGATEIKQHPFFEGVNWALIRCSTPPEVPRQMETEPPPKYGPID-PVGFGS-N 736
Query: 325 SKRMVGNNDM------IKSGGNYLDFEFF 257
SKRM+G + KSGG +LDFEFF
Sbjct: 737 SKRMMGPPAVSAAAADTKSGGKFLDFEFF 765
>gb|AAL84933.1| At2g44830/T13E15.16 [Arabidopsis thaliana]
Length = 765
Score = 108 bits (271), Expect = 3e-23
Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 6/89 (6%)
Frame = -1
Query: 505 RTRLGMKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESDLPAKFEAVDNTVGVGNYN 326
+ RLG KRGATEIKQHPFFEGVNWALIRCSTPPEVPR +E++ P K+ +D VG G+ N
Sbjct: 679 KNRLGTKRGATEIKQHPFFEGVNWALIRCSTPPEVPRQMETEPPPKYGPID-PVGFGS-N 736
Query: 325 SKRMVGNNDM------IKSGGNYLDFEFF 257
SKRM+G + KSGG +LDFEFF
Sbjct: 737 SKRMMGPPAVSAAAADTKSGGKFLDFEFF 765
>pir||T00410 protein kinase homolog T13E15.16 - Arabidopsis thaliana
gi|2344901|gb|AAC31841.1| putative protein kinase
[Arabidopsis thaliana]
Length = 762
Score = 108 bits (271), Expect = 3e-23
Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 6/89 (6%)
Frame = -1
Query: 505 RTRLGMKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESDLPAKFEAVDNTVGVGNYN 326
+ RLG KRGATEIKQHPFFEGVNWALIRCSTPPEVPR +E++ P K+ +D VG G+ N
Sbjct: 676 KNRLGTKRGATEIKQHPFFEGVNWALIRCSTPPEVPRQMETEPPPKYGPID-PVGFGS-N 733
Query: 325 SKRMVGNNDM------IKSGGNYLDFEFF 257
SKRM+G + KSGG +LDFEFF
Sbjct: 734 SKRMMGPPAVSAAAADTKSGGKFLDFEFF 762
>gb|AAK31277.1|AC079890_13 putative protein kinase [Oryza sativa]
Length = 651
Score = 89.7 bits (221), Expect = 2e-17
Identities = 47/95 (49%), Positives = 57/95 (59%), Gaps = 14/95 (14%)
Frame = -1
Query: 499 RLGMKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVE------------SDLPAKFEAV 356
RLG+KRGA EIKQHPFF+GVNWALIRCSTPP VPR VE P + V
Sbjct: 557 RLGVKRGAAEIKQHPFFDGVNWALIRCSTPPGVPRAVEPVAVAAAVPATVMSKPPPVDTV 616
Query: 355 DNTV--GVGNYNSKRMVGNNDMIKSGGNYLDFEFF 257
+ + + NS + + ++SGG YLDFEFF
Sbjct: 617 EMAIHSNCNSTNSSKRMAGPPEVESGGKYLDFEFF 651
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 452,746,143
Number of Sequences: 1393205
Number of extensions: 9687331
Number of successful extensions: 27422
Number of sequences better than 10.0: 354
Number of HSP's better than 10.0 without gapping: 26538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27404
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
