Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011245A_C01 KMC011245A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC41370.1| beta-oxyacyl-[acyl-carrier protein] reductase [B... 156 2e-37
sp|P28643|FABG_CUPLA 3-oxoacyl-[acyl-carrier protein] reductase,... 147 6e-35
emb|CAC41363.1| 3-oxyacyl-[acyl carrier protein] reductase [Bras... 147 8e-35
emb|CAC41364.1| 3-oxyacyl-[acyl carrier protein] reductase [Bras... 143 1e-33
emb|CAC41362.1| 3-oxyacyl-[acyl-carrier protein] reductase [Bras... 137 9e-32
>emb|CAC41370.1| beta-oxyacyl-[acyl-carrier protein] reductase [Brassica napus]
Length = 320
Score = 156 bits (394), Expect = 2e-37
Identities = 85/146 (58%), Positives = 111/146 (75%)
Frame = +1
Query: 112 TIMASLTASNCAALRTVNFAAANRKIAQIRQWSPILTHLRPLSGLRCGSNHSFSSSSSGV 291
T +A+ ++ A++ + F R+I Q+RQWSP+ + + LRCGS SF++S+ V
Sbjct: 3 TTVAATKLTSLKAVKKLGF----REIRQVRQWSPLQSAMPHFGMLRCGSRQSFATSTV-V 57
Query: 292 RAQVATLEQAGTGAPSKVDAPVVVVTGASRGIGRAIALSLGKAGCKVLVNYARSSEEAEE 471
+AQ +EQ+ A KV++PVVVVTGASRGIG+AIALSLGKAGCKVLVNYARS++EAEE
Sbjct: 58 KAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEE 117
Query: 472 VSKEIEAFGGQAITFKGNVSNEDDVE 549
VSK+IEA+GGQAITF G+VS E DVE
Sbjct: 118 VSKQIEAYGGQAITFGGDVSKEADVE 143
>sp|P28643|FABG_CUPLA 3-oxoacyl-[acyl-carrier protein] reductase, chloroplast precursor
(3-ketoacyl-acyl carrier protein reductase)
gi|1084385|pir||S22450 3-oxoacyl-[acyl-carrier-protein]
reductase (EC 1.1.1.100) precursor, NADPH-dependent
[validated] - Cuphea lanceolata gi|18046|emb|CAA45866.1|
3-oxoacyl-[acyl-carrier protein] reductase;
beta-ketoacyl-ACP reductase [Cuphea lanceolata]
gi|228929|prf||1814446A beta ketoacyl-ACP reductase
Length = 320
Score = 147 bits (372), Expect = 6e-35
Identities = 81/144 (56%), Positives = 104/144 (71%)
Frame = +1
Query: 118 MASLTASNCAALRTVNFAAANRKIAQIRQWSPILTHLRPLSGLRCGSNHSFSSSSSGVRA 297
MA+ TA+ C+ + + R++ +Q SP+L + + S ++SG+RA
Sbjct: 1 MATATAAGCSGAVALK-SLGGRRLCIPQQLSPVLAGFGSHAAKSFPILSTRSIATSGIRA 59
Query: 298 QVATLEQAGTGAPSKVDAPVVVVTGASRGIGRAIALSLGKAGCKVLVNYARSSEEAEEVS 477
QVAT E+ GA V++PVV+VTGASRGIG+AIALSLGKAGCKVLVNYARSS+EAEEVS
Sbjct: 60 QVATAEKVSAGAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVS 119
Query: 478 KEIEAFGGQAITFKGNVSNEDDVE 549
KEIEAFGGQA+TF G+VS E+DVE
Sbjct: 120 KEIEAFGGQALTFGGDVSKEEDVE 143
>emb|CAC41363.1| 3-oxyacyl-[acyl carrier protein] reductase [Brassica napus]
Length = 328
Score = 147 bits (371), Expect = 8e-35
Identities = 83/148 (56%), Positives = 106/148 (71%), Gaps = 6/148 (4%)
Frame = +1
Query: 124 SLTASNCAALRTVNFAAANRKIAQIRQWSPILTHLRPLSGLRCGSNHSFSSSSSGV---R 294
S+ +L+T R+I +RQW+P+ + + LRCGS F++SSS V +
Sbjct: 5 SIAGPRLTSLKTAAGKLGYREICHVRQWAPVHSPMPHFGMLRCGSRRPFATSSSTVVQAQ 64
Query: 295 AQVATLEQAGTG---APSKVDAPVVVVTGASRGIGRAIALSLGKAGCKVLVNYARSSEEA 465
AQ EQ+ TG A KV++PVVVVTGASRGIG+AIALSLGKAGCKVLVNYARS++EA
Sbjct: 65 AQATAAEQS-TGEEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEA 123
Query: 466 EEVSKEIEAFGGQAITFKGNVSNEDDVE 549
E+VSK+IEA+GGQAITF G+VS E DV+
Sbjct: 124 EQVSKQIEAYGGQAITFGGDVSKEADVD 151
>emb|CAC41364.1| 3-oxyacyl-[acyl carrier protein] reductase [Brassica napus]
Length = 315
Score = 143 bits (361), Expect = 1e-33
Identities = 81/146 (55%), Positives = 108/146 (73%)
Frame = +1
Query: 112 TIMASLTASNCAALRTVNFAAANRKIAQIRQWSPILTHLRPLSGLRCGSNHSFSSSSSGV 291
T +A+ ++ A++ + F R+I Q+RQW+P+ + + GS SF++S+ V
Sbjct: 3 TTVAATKLTSLKAVKKLGF----REIRQVRQWTPLQSSMPHF-----GSRQSFATSTV-V 52
Query: 292 RAQVATLEQAGTGAPSKVDAPVVVVTGASRGIGRAIALSLGKAGCKVLVNYARSSEEAEE 471
+AQ +EQ+ A KV++PVVVVTGASRGIG+AIALSLGKAGCKVLVNYARS++EAEE
Sbjct: 53 KAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEE 112
Query: 472 VSKEIEAFGGQAITFKGNVSNEDDVE 549
VSK+IEA+GGQAITF G+VS E DVE
Sbjct: 113 VSKQIEAYGGQAITFGGDVSKEADVE 138
>emb|CAC41362.1| 3-oxyacyl-[acyl-carrier protein] reductase [Brassica napus]
Length = 317
Score = 137 bits (345), Expect = 9e-32
Identities = 73/142 (51%), Positives = 99/142 (69%)
Frame = +1
Query: 124 SLTASNCAALRTVNFAAANRKIAQIRQWSPILTHLRPLSGLRCGSNHSFSSSSSGVRAQV 303
++ A+ +L+ R+I Q+RQW+P+ + + LRC ++ + + +AQ
Sbjct: 2 TVAATKLTSLKATAGKLGYREICQVRQWAPLKSAMPHFGMLRCATSTVVKAQA---QAQA 58
Query: 304 ATLEQAGTGAPSKVDAPVVVVTGASRGIGRAIALSLGKAGCKVLVNYARSSEEAEEVSKE 483
EQ A KV++PVVVVTGASRGIG+AIALSLGKAGCKVLVNYARS++EAEEVSK+
Sbjct: 59 TATEQTTEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQ 118
Query: 484 IEAFGGQAITFKGNVSNEDDVE 549
IE +GG+AITF G+VS E DV+
Sbjct: 119 IEEYGGEAITFGGDVSKEADVD 140
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.316 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,389,054
Number of Sequences: 1393205
Number of extensions: 12504323
Number of successful extensions: 62073
Number of sequences better than 10.0: 2117
Number of HSP's better than 10.0 without gapping: 56230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61559
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
