Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011154A_C01 KMC011154A_c01
(764 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187982.1| protein kinase, putative; protein id: At3g13690... 37 0.31
gb|AAM98096.1| AT3g13690/MMM17_12 [Arabidopsis thaliana] gi|2776... 37 0.31
dbj|BAA92953.1| unnamed protein product [Oryza sativa (japonica ... 37 0.31
ref|NP_179879.1| potential calcium-transporting ATPase 7, plasma... 37 0.31
gb|AAF43402.1| serine/threonine protein kinase [Oryza sativa (ja... 37 0.31
>ref|NP_187982.1| protein kinase, putative; protein id: At3g13690.1 [Arabidopsis
thaliana] gi|9294015|dbj|BAB01918.1| contains similarity
to Serine/Threonine protein kinase~gene_id:MMM17.11
[Arabidopsis thaliana]
Length = 753
Score = 37.0 bits (84), Expect = 0.31
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -3
Query: 381 LVILIGFCLEDKRRLSVYEYM 319
+V+LIGFC+ED RRL VYEY+
Sbjct: 467 VVMLIGFCIEDSRRLLVYEYI 487
>gb|AAM98096.1| AT3g13690/MMM17_12 [Arabidopsis thaliana]
gi|27764964|gb|AAO23603.1| AT3g13690/MMM17_12
[Arabidopsis thaliana]
Length = 753
Score = 37.0 bits (84), Expect = 0.31
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -3
Query: 381 LVILIGFCLEDKRRLSVYEYM 319
+V+LIGFC+ED RRL VYEY+
Sbjct: 467 VVMLIGFCIEDSRRLLVYEYI 487
>dbj|BAA92953.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 755
Score = 37.0 bits (84), Expect = 0.31
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -3
Query: 381 LVILIGFCLEDKRRLSVYEYM------NWRFYKFRNSCIPLR 274
LV LIGFCLE RL VYE+M W +YK N + R
Sbjct: 519 LVRLIGFCLEKSHRLLVYEFMPKGSLDQWIYYKDSNDTLDWR 560
>ref|NP_179879.1| potential calcium-transporting ATPase 7, plasma membrane-type
(Ca2+-ATPase, isoform 7); protein id: At2g22950.1
[Arabidopsis thaliana] gi|12229638|sp|O64806|ACA7_ARATH
Potential calcium-transporting ATPase 7, plasma
membrane-type (Ca2+-ATPase, isoform 7)
gi|25290669|pir||H84618 probable Ca2+-ATPase [imported]
- Arabidopsis thaliana gi|20197272|gb|AAM15005.1|
putative Ca2+-ATPase [Arabidopsis thaliana]
Length = 1015
Score = 37.0 bits (84), Expect = 0.31
Identities = 17/29 (58%), Positives = 21/29 (71%)
Frame = -3
Query: 450 ILQTSQN*FFLPGTKVQDGSSTMLVILIG 364
++ T+QN F L GTKVQDGS MLV +G
Sbjct: 295 VMVTAQNPFLLSGTKVQDGSCKMLVTTVG 323
>gb|AAF43402.1| serine/threonine protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 176
Score = 37.0 bits (84), Expect = 0.31
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -3
Query: 381 LVILIGFCLEDKRRLSVYEYM------NWRFYKFRNSCIPLR 274
LV LIGFCLE RL VYE+M W +YK N + R
Sbjct: 44 LVRLIGFCLEKSHRLLVYEFMPKGSLDQWIYYKDSNDTLDWR 85
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 618,390,226
Number of Sequences: 1393205
Number of extensions: 12738211
Number of successful extensions: 27309
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 26606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27301
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37254821786
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
