Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011032A_C01 KMC011032A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B86210 protein F22G5.6 [imported] - Arabidopsis thaliana gi... 111 8e-24
ref|NP_172236.1| protein kinase, putative; protein id: At1g07560... 111 8e-24
ref|NP_178510.1| putative receptor-like protein kinase; protein ... 107 8e-23
ref|NP_200776.1| serine/threonine-specific protein kinase - like... 107 1e-22
dbj|BAB09506.1| receptor-like protein kinase [Arabidopsis thaliana] 107 1e-22
>pir||B86210 protein F22G5.6 [imported] - Arabidopsis thaliana
gi|8778570|gb|AAF79578.1|AC022464_36 F22G5.6 [Arabidopsis
thaliana]
Length = 937
Score = 111 bits (277), Expect = 8e-24
Identities = 52/110 (47%), Positives = 75/110 (67%)
Frame = -1
Query: 583 FKLRNLNEKSDVFSFGIVLLELITGRHAVLKGNPCMHILEWLTPELEGGDVSRILDPRLQ 404
++ L+EKSDV+SFG+VLLE+IT + + HI EW+ L GD+S I+DP+LQ
Sbjct: 807 YQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPHIAEWVKLMLTRGDISNIMDPKLQ 866
Query: 403 GKFDASSGWKALGIAMSCTAPSSIQRPTMSVVLAELRQCFRMESPSDREI 254
G +D+ S WKAL +AM+C PSS++RP MS V+ EL++C E+ R+I
Sbjct: 867 GVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKECLVSENNRTRDI 916
>ref|NP_172236.1| protein kinase, putative; protein id: At1g07560.1 [Arabidopsis
thaliana]
Length = 856
Score = 111 bits (277), Expect = 8e-24
Identities = 52/110 (47%), Positives = 75/110 (67%)
Frame = -1
Query: 583 FKLRNLNEKSDVFSFGIVLLELITGRHAVLKGNPCMHILEWLTPELEGGDVSRILDPRLQ 404
++ L+EKSDV+SFG+VLLE+IT + + HI EW+ L GD+S I+DP+LQ
Sbjct: 726 YQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPHIAEWVKLMLTRGDISNIMDPKLQ 785
Query: 403 GKFDASSGWKALGIAMSCTAPSSIQRPTMSVVLAELRQCFRMESPSDREI 254
G +D+ S WKAL +AM+C PSS++RP MS V+ EL++C E+ R+I
Sbjct: 786 GVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKECLVSENNRTRDI 835
>ref|NP_178510.1| putative receptor-like protein kinase; protein id: At2g04300.1
[Arabidopsis thaliana] gi|25387142|pir||H84455 probable
receptor-like protein kinase [imported] - Arabidopsis
thaliana gi|4689473|gb|AAD27909.1| putative receptor-like
protein kinase [Arabidopsis thaliana]
Length = 851
Score = 107 bits (268), Expect = 8e-23
Identities = 51/99 (51%), Positives = 67/99 (67%)
Frame = -1
Query: 568 LNEKSDVFSFGIVLLELITGRHAVLKGNPCMHILEWLTPELEGGDVSRILDPRLQGKFDA 389
LNEKSDV+SFGIVLLE+IT +H + + HI EW+ L GD+ I+DP+ G +DA
Sbjct: 720 LNEKSDVYSFGIVLLEIITNQHVINQSREKPHIAEWVGVMLTKGDIKSIIDPKFSGDYDA 779
Query: 388 SSGWKALGIAMSCTAPSSIQRPTMSVVLAELRQCFRMES 272
S W+A+ +AMSC PSS RPTMS V+ EL +C E+
Sbjct: 780 GSVWRAVELAMSCVNPSSTGRPTMSQVVIELNECLASEN 818
>ref|NP_200776.1| serine/threonine-specific protein kinase - like; protein id:
At5g59680.1 [Arabidopsis thaliana]
Length = 882
Score = 107 bits (266), Expect = 1e-22
Identities = 49/99 (49%), Positives = 72/99 (72%)
Frame = -1
Query: 568 LNEKSDVFSFGIVLLELITGRHAVLKGNPCMHILEWLTPELEGGDVSRILDPRLQGKFDA 389
L+EKSDV+SFGIVLLE+IT + + + HI +W+ EL GGD+++I+D +L G +D+
Sbjct: 754 LSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHITQWVGSELNGGDIAKIMDLKLNGDYDS 813
Query: 388 SSGWKALGIAMSCTAPSSIQRPTMSVVLAELRQCFRMES 272
S W+AL +AMSC P+S +RPTMS V+ EL++C E+
Sbjct: 814 RSAWRALELAMSCADPTSARRPTMSHVVIELKECLVSEN 852
>dbj|BAB09506.1| receptor-like protein kinase [Arabidopsis thaliana]
Length = 887
Score = 107 bits (266), Expect = 1e-22
Identities = 49/99 (49%), Positives = 72/99 (72%)
Frame = -1
Query: 568 LNEKSDVFSFGIVLLELITGRHAVLKGNPCMHILEWLTPELEGGDVSRILDPRLQGKFDA 389
L+EKSDV+SFGIVLLE+IT + + + HI +W+ EL GGD+++I+D +L G +D+
Sbjct: 759 LSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHITQWVGSELNGGDIAKIMDLKLNGDYDS 818
Query: 388 SSGWKALGIAMSCTAPSSIQRPTMSVVLAELRQCFRMES 272
S W+AL +AMSC P+S +RPTMS V+ EL++C E+
Sbjct: 819 RSAWRALELAMSCADPTSARRPTMSHVVIELKECLVSEN 857
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 485,205,462
Number of Sequences: 1393205
Number of extensions: 10139639
Number of successful extensions: 26514
Number of sequences better than 10.0: 1665
Number of HSP's better than 10.0 without gapping: 24945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25628
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
