Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011015A_C01 KMC011015A_c01
(495 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187646.1| putative ATPase; protein id: At3g10350.1 [Arabi... 107 7e-23
dbj|BAB09846.1| arsenite translocating ATPase-like protein [Arab... 99 3e-20
ref|NP_200881.1| ATPase - like protein; protein id: At5g60730.1 ... 99 3e-20
emb|CAB54139.1| ATPase [Solanum tuberosum] 62 3e-09
ref|NP_276625.1| arsenical pump-driving ATPase [Methanothermobac... 48 7e-05
>ref|NP_187646.1| putative ATPase; protein id: At3g10350.1 [Arabidopsis thaliana]
gi|6056208|gb|AAF02825.1|AC009400_21 putative ATPase
[Arabidopsis thaliana]
Length = 386
Score = 107 bits (267), Expect = 7e-23
Identities = 50/70 (71%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Frame = -3
Query: 493 VKRLVINQVLP-HASDCKFCSMKRKDQMRAIETIHNDSELSGLRLCEAPLVDMEIRGVPA 317
VKRL++NQ+LP +SDCKFCS+KRKDQMRA++ I DSELS L L EAPLVDMEIRGVPA
Sbjct: 317 VKRLIVNQLLPPSSSDCKFCSIKRKDQMRALDMIREDSELSALTLMEAPLVDMEIRGVPA 376
Query: 316 LKFMGDMLWR 287
L+F+GD++W+
Sbjct: 377 LRFLGDIIWK 386
>dbj|BAB09846.1| arsenite translocating ATPase-like protein [Arabidopsis thaliana]
Length = 417
Score = 99.0 bits (245), Expect = 3e-20
Identities = 44/70 (62%), Positives = 60/70 (84%), Gaps = 1/70 (1%)
Frame = -3
Query: 493 VKRLVINQVLPHA-SDCKFCSMKRKDQMRAIETIHNDSELSGLRLCEAPLVDMEIRGVPA 317
V RL++NQ+LP + SDCKFCS++RK+Q R + I ND+ELSGL+L ++PL+D EIRGVPA
Sbjct: 348 VHRLIVNQLLPQSESDCKFCSIRRKEQTRVLGLIQNDTELSGLKLIQSPLLDAEIRGVPA 407
Query: 316 LKFMGDMLWR 287
LKFMGD++W+
Sbjct: 408 LKFMGDLIWK 417
>ref|NP_200881.1| ATPase - like protein; protein id: At5g60730.1 [Arabidopsis
thaliana]
Length = 393
Score = 99.0 bits (245), Expect = 3e-20
Identities = 44/70 (62%), Positives = 60/70 (84%), Gaps = 1/70 (1%)
Frame = -3
Query: 493 VKRLVINQVLPHA-SDCKFCSMKRKDQMRAIETIHNDSELSGLRLCEAPLVDMEIRGVPA 317
V RL++NQ+LP + SDCKFCS++RK+Q R + I ND+ELSGL+L ++PL+D EIRGVPA
Sbjct: 324 VHRLIVNQLLPQSESDCKFCSIRRKEQTRVLGLIQNDTELSGLKLIQSPLLDAEIRGVPA 383
Query: 316 LKFMGDMLWR 287
LKFMGD++W+
Sbjct: 384 LKFMGDLIWK 393
>emb|CAB54139.1| ATPase [Solanum tuberosum]
Length = 369
Score = 62.4 bits (150), Expect = 3e-09
Identities = 30/43 (69%), Positives = 35/43 (80%), Gaps = 1/43 (2%)
Frame = -3
Query: 493 VKRLVINQVLP-HASDCKFCSMKRKDQMRAIETIHNDSELSGL 368
VKRL+ NQ+LP ASDCKFC+MKRKDQ RA++ I ND ELS L
Sbjct: 326 VKRLIANQILPPSASDCKFCAMKRKDQSRALDMIQNDPELSSL 368
>ref|NP_276625.1| arsenical pump-driving ATPase [Methanothermobacter
thermautotrophicus] gi|6647437|sp|O27555|ARSA_METTH
Putative arsenical pump-driving ATPase
(Arsenite-translocating ATPase) (Arsenical resistance
ATPase) (Arsenite-transporting ATPase)
gi|7428325|pir||F69068 probable arsenical pump-driving
ATPase (EC 3.6.1.-) - Methanobacterium
thermoautotrophicum (strain Delta H)
gi|2622629|gb|AAB85986.1| arsenical pump-driving ATPase
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 324
Score = 47.8 bits (112), Expect = 7e-05
Identities = 22/65 (33%), Positives = 39/65 (59%)
Frame = -3
Query: 484 LVINQVLPHASDCKFCSMKRKDQMRAIETIHNDSELSGLRLCEAPLVDMEIRGVPALKFM 305
+++NQVLP SDC+FC+ +RK Q ++ I + S + E PL+ E +G+ L+ +
Sbjct: 256 VIVNQVLPEESDCEFCNARRKLQQERLKQIR--EKFSDKVVAEVPLLKKEAKGIETLEKI 313
Query: 304 GDMLW 290
+ L+
Sbjct: 314 AEQLY 318
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 385,497,311
Number of Sequences: 1393205
Number of extensions: 7852323
Number of successful extensions: 18029
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 17014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18013
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
