>KMC011004A_C01 KMC011004A_c01
tgaacttaacaagttgacaAATAGCAGTGGAAATTAATATAACATCAGAGTAACAAAAAG
TTCATTGTCTGCCTAGAAAGGTGACAAAACACAAAATCATGATAAACTAGATCCTGTTAC
TAAGATCAAATTTCAAGATGTCAATGATAAGATGACCATTCAAATCTTACTGGCTGCAAA
GTTCTTCTTCAGATCTGCCCATTCATCTTCAACTATCTTCTTATTAGTTAGGGCCACTTG
GTAAGAAGTCTCATACTTCTTTAAATCTGTGATGATATTCTGGCAATCTGGAACCCATTG
AGCAACCTGAGCCTTTAATTTCCCACTTTCAACATCACAACAATCCATTTCTCTCTTCAG
CCTGTCTCTGGTCTCAATCAAACCCCTTAATTTTTCTTCTAGTTCAGAAATCTCAGAATG
GATCTCTTCAAATGGTATTTTATGTTGAGAGACTTTTGAATTAATGTGCTCTTGGCTGGC
TTTGGCACTTCTCAGTTGTTCTGACAGAAGAGATCTTGACTGTACAAGCTGATCATAATC
ATGGATAGTTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC011004A_C01 KMC011004A_c01
         (551 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_177964.1| hypothetical protein; protein id: At1g78430.1 [...    40  0.014
dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio]                   40  0.014
dbj|BAA09067.1| myosin heavy chain [Cyprinus carpio]                   40  0.014
emb|CAD10419.2| SMC protein [Burkholderia cepacia]                     40  0.014
ref|ZP_00030353.1| hypothetical protein [Burkholderia fungorum]        40  0.014

>ref|NP_177964.1| hypothetical protein; protein id: At1g78430.1 [Arabidopsis
           thaliana] gi|25405032|pir||G96812 protein F3F9.6
           [imported] - Arabidopsis thaliana
           gi|8052548|gb|AAF71812.1|AC013430_21 F3F9.6 [Arabidopsis
           thaliana]
          Length = 326

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 498 QLRSAKASQEHINSKVSQHKIPFEEIHSEISELEEKLRGLIETRDRLKREMDCCDVESGK 319
           ++  AKA ++ I SKVSQ     EE +   ++L++KL  + E ++ L+ EM        K
Sbjct: 195 EMSCAKAKEDEIASKVSQIGEELEESNETTAKLKKKLESVEEAKETLEAEMK-------K 247

Query: 318 LKAQVAQW 295
           LK Q  QW
Sbjct: 248 LKVQTEQW 255

>dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio]
          Length = 1933

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
 Frame = -3

Query: 534  DQLVQSRSLLSEQLRSAKASQEHINSKVSQHKIPFEEIHSEISEL---EEKLRGLIETRD 364
            ++L +S+  L+++L+ A+ S E +NSK +  +   + + SE+ +L    E+   L    D
Sbjct: 1383 EELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQSEVEDLMIDGERANALAANLD 1442

Query: 363  RLKREMDCC------DVESGKLKAQVAQWVPDCQNIITDLKKYETSYQVALTNKKIVEDE 202
            + +R  D          E  + + + AQ   + +++ T+L K + SY+ AL + + ++ E
Sbjct: 1443 KKQRNFDKVLADWKQKYEESQAELEAAQ--KEARSLSTELFKMKNSYEEALDHLETLKRE 1500

Query: 201  WADLKKNFA 175
              +L++  +
Sbjct: 1501 NKNLQQEIS 1509

>dbj|BAA09067.1| myosin heavy chain [Cyprinus carpio]
          Length = 1196

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
 Frame = -3

Query: 534  DQLVQSRSLLSEQLRSAKASQEHINSKVSQHKIPFEEIHSEISEL---EEKLRGLIETRD 364
            ++L +S+  L+++L+ A+ S E +NSK +  +   + + SE+ +L    E+   L    D
Sbjct: 646  EELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQSEVEDLMIDGERANALAANLD 705

Query: 363  RLKREMDCC------DVESGKLKAQVAQWVPDCQNIITDLKKYETSYQVALTNKKIVEDE 202
            + +R  D          E  + + + AQ   + +++ T+L K + SY+ AL + + ++ E
Sbjct: 706  KKQRNFDKVLADWKQKYEESQAELEAAQ--KEARSLSTELFKMKNSYEEALDHLETLKRE 763

Query: 201  WADLKKNFA 175
              +L++  +
Sbjct: 764  NKNLQQEIS 772

>emb|CAD10419.2| SMC protein [Burkholderia cepacia]
          Length = 1172

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = -3

Query: 426 EIHSEISELEEKLRGLIETRDRLKREMDCCDVESGKLKAQVAQWVPDCQNIITDLKKYET 247
           E +SE+S LE +++ ++E+R+R++ ++         L AQ  QW    Q    DL   E 
Sbjct: 295 EANSEVSRLEAEIKFIVESRNRVQAQI-------AALNAQREQWQSQAQKAQDDLADAEE 347

Query: 246 SYQVALTNKKIVEDEWA 196
              VA     +VEDE A
Sbjct: 348 QLAVAEEKATLVEDEAA 364

>ref|ZP_00030353.1| hypothetical protein [Burkholderia fungorum]
          Length = 1198

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = -3

Query: 426 EIHSEISELEEKLRGLIETRDRLKREMDCCDVESGKLKAQVAQWVPDCQNIITDLKKYET 247
           E +SE+S LE +++ ++E+R+R++ ++         L AQ  QW    Q    DL   E 
Sbjct: 321 EANSEVSRLEAEIKFIVESRNRVQAQI-------AALNAQREQWQSQAQKAQDDLADAEE 373

Query: 246 SYQVALTNKKIVEDEWA 196
              VA     +VEDE A
Sbjct: 374 QLAVAEEKATLVEDEAA 390

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,438,126
Number of Sequences: 1393205
Number of extensions: 7856784
Number of successful extensions: 24664
Number of sequences better than 10.0: 332
Number of HSP's better than 10.0 without gapping: 23104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24593
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MRL040a06_f BP085656 1 358 2 MFBL036f05_f BP043079 89 481 3 MFL015e06_f BP033804 89 609 4 SPDL074f10_f BP056595 91 574 5 SPDL011e12_f BP052674 102 612

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