Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC011001A_C01 KMC011001A_c01
(718 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T01981 sucrose-phosphate synthase homolog T9A4.14 - Arabido... 169 3e-41
ref|NP_192750.1| sucrose-phosphate synthase - like protein; prot... 169 3e-41
sp|O04933|SPS2_CRAPL SUCROSE-PHOSPHATE SYNTHASE 2 (UDP-GLUCOSE-F... 138 7e-32
dbj|BAB86107.1| putative sucrose-phosphate synthase [Oryza sativ... 136 3e-31
pir||T04103 sucrose-phosphate synthase (EC 2.4.1.14) 1 - rice gi... 135 7e-31
>pir||T01981 sucrose-phosphate synthase homolog T9A4.14 - Arabidopsis thaliana
gi|3695412|gb|AAC62812.1| contains similarity to group 1
glycosyl transferases (Pfam: PF00534, E=2.1e-11)
[Arabidopsis thaliana]
Length = 501
Score = 169 bits (429), Expect = 3e-41
Identities = 82/128 (64%), Positives = 102/128 (79%)
Frame = -2
Query: 711 RKIDDLRQRLRMRGFRCNLVYTHAGLRLNVIPLFASRKQALRYLSIKWGIDLSKVVVIVG 532
R++DDLRQRLRMRG RCN+VYTHA RLNVIPL ASR QALRYLSI+WGID+SK V +G
Sbjct: 369 RRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLSIRWGIDMSKTVFFLG 428
Query: 531 EKGDTDYEELTAGIQKTLVLRGVVEHGSERLLRSEDSIKGEDVVSQDSPNIIYAEKSLED 352
EKGDTDYE+L G+ KT++L+GVV SE+LLRSE++ K ED V Q+SPNI Y +++
Sbjct: 429 EKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKREDAVPQESPNISYVKENGGS 488
Query: 351 YDISAILE 328
+I + LE
Sbjct: 489 QEIMSTLE 496
>ref|NP_192750.1| sucrose-phosphate synthase - like protein; protein id: At4g10120.1
[Arabidopsis thaliana] gi|7433836|pir||T04062
sucrose-phosphate synthase homolog F28M11.40 -
Arabidopsis thaliana gi|4538976|emb|CAB39764.1|
sucrose-phosphate synthase-like protein [Arabidopsis
thaliana] gi|7267708|emb|CAB78135.1| sucrose-phosphate
synthase-like protein [Arabidopsis thaliana]
Length = 1083
Score = 169 bits (429), Expect = 3e-41
Identities = 82/128 (64%), Positives = 102/128 (79%)
Frame = -2
Query: 711 RKIDDLRQRLRMRGFRCNLVYTHAGLRLNVIPLFASRKQALRYLSIKWGIDLSKVVVIVG 532
R++DDLRQRLRMRG RCN+VYTHA RLNVIPL ASR QALRYLSI+WGID+SK V +G
Sbjct: 951 RRVDDLRQRLRMRGLRCNIVYTHAATRLNVIPLCASRIQALRYLSIRWGIDMSKTVFFLG 1010
Query: 531 EKGDTDYEELTAGIQKTLVLRGVVEHGSERLLRSEDSIKGEDVVSQDSPNIIYAEKSLED 352
EKGDTDYE+L G+ KT++L+GVV SE+LLRSE++ K ED V Q+SPNI Y +++
Sbjct: 1011 EKGDTDYEDLLGGLHKTIILKGVVGSDSEKLLRSEENFKREDAVPQESPNISYVKENGGS 1070
Query: 351 YDISAILE 328
+I + LE
Sbjct: 1071 QEIMSTLE 1078
>sp|O04933|SPS2_CRAPL SUCROSE-PHOSPHATE SYNTHASE 2 (UDP-GLUCOSE-FRUCTOSE-PHOSPHATE
GLUCOSYLTRANSFERASE 2) gi|7433842|pir||T09837
sucrose-phosphate synthase (EC 2.4.1.14) isoform 2 -
Craterostigma plantagineum gi|2190350|emb|CAA72491.1|
sucrose-phosphate synthase [Craterostigma plantagineum]
Length = 1081
Score = 138 bits (348), Expect = 7e-32
Identities = 64/116 (55%), Positives = 87/116 (74%)
Frame = -2
Query: 711 RKIDDLRQRLRMRGFRCNLVYTHAGLRLNVIPLFASRKQALRYLSIKWGIDLSKVVVIVG 532
+K+DD+RQ+LRMRG RC+L+Y + V+PL ASR QALRYL ++W + ++ + VI+G
Sbjct: 947 KKVDDMRQKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILG 1006
Query: 531 EKGDTDYEELTAGIQKTLVLRGVVEHGSERLLRSEDSIKGEDVVSQDSPNIIYAEK 364
E GDTDYEEL +G KTL++RGVVE GSE LLR+ S +DV+ QD+P I YA+K
Sbjct: 1007 ETGDTDYEELISGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQDTPLIAYADK 1062
>dbj|BAB86107.1| putative sucrose-phosphate synthase [Oryza sativa (japonica
cultivar-group)]
Length = 1100
Score = 136 bits (342), Expect = 3e-31
Identities = 63/131 (48%), Positives = 94/131 (71%)
Frame = -2
Query: 714 IRKIDDLRQRLRMRGFRCNLVYTHAGLRLNVIPLFASRKQALRYLSIKWGIDLSKVVVIV 535
+R ID++R+R+RMRG RC+L+Y RL V+PL ASR QALRYL ++WG+ + + +IV
Sbjct: 963 VRTIDEMRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIV 1022
Query: 534 GEKGDTDYEELTAGIQKTLVLRGVVEHGSERLLRSEDSIKGEDVVSQDSPNIIYAEKSLE 355
GE GDTD+EE+ +G+ KT+++RGV E GSE+L+RS S + EDVV +SP I + + L+
Sbjct: 1023 GEHGDTDHEEMLSGLHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSESPLIAFTKGDLK 1082
Query: 354 DYDISAILEHL 322
+I L+ +
Sbjct: 1083 ADEIMRALKEV 1093
>pir||T04103 sucrose-phosphate synthase (EC 2.4.1.14) 1 - rice
gi|1311479|dbj|BAA08304.1| sucrose phosphate synthase
[Oryza sativa (japonica cultivar-group)]
Length = 1084
Score = 135 bits (339), Expect = 7e-31
Identities = 62/131 (47%), Positives = 94/131 (71%)
Frame = -2
Query: 714 IRKIDDLRQRLRMRGFRCNLVYTHAGLRLNVIPLFASRKQALRYLSIKWGIDLSKVVVIV 535
+R +D++R+R+RMRG RC+L+Y RL V+PL ASR QALRYL ++WG+ + + +IV
Sbjct: 947 VRTMDEMRERVRMRGLRCHLMYCRNATRLQVVPLLASRSQALRYLFVRWGLSVGNMYLIV 1006
Query: 534 GEKGDTDYEELTAGIQKTLVLRGVVEHGSERLLRSEDSIKGEDVVSQDSPNIIYAEKSLE 355
GE GDTD+EE+ +G+ KT+++RGV E GSE+L+RS S + EDVV +SP I + + L+
Sbjct: 1007 GEHGDTDHEEMLSGLHKTVIIRGVTEKGSEQLVRSSGSYQREDVVPSESPLIAFTKGDLK 1066
Query: 354 DYDISAILEHL 322
+I L+ +
Sbjct: 1067 ADEIMRALKEV 1077
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,311,204
Number of Sequences: 1393205
Number of extensions: 11607569
Number of successful extensions: 26144
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 25226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26116
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33217548346
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
