Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010945A_C01 KMC010945A_c01
(591 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC39078.1| acetylglutamate kinase-like protein [Oryza sativa] 197 6e-50
ref|NP_191315.1| acetylglutamate kinase-like protein; protein id... 190 1e-47
gb|AAM65613.1| acetylglutamate kinase-like protein [Arabidopsis ... 190 1e-47
ref|ZP_00073134.1| hypothetical protein [Trichodesmium erythraeu... 162 3e-39
ref|NP_485288.1| acetylglutamate kinase [Nostoc sp. PCC 7120] gi... 159 2e-38
>emb|CAC39078.1| acetylglutamate kinase-like protein [Oryza sativa]
Length = 346
Score = 197 bits (502), Expect = 6e-50
Identities = 101/162 (62%), Positives = 124/162 (76%), Gaps = 8/162 (4%)
Frame = +2
Query: 128 TEIKTKNPTTNLTFPSTAGR--------CSSAVHLPPTTTAAESLSPGQSRVDILAESLP 283
T + +P + P +GR C+S+V + A+ +P SRVD+L+E+LP
Sbjct: 18 TALPNPSPNPSRVTPLASGRGRRGHHRVCASSVAPAQPASVAQPTAPALSRVDVLSEALP 77
Query: 284 FIQKFRGKTIVVKYGGAAMKSPELQASVINDLVLLSCVGLRPVMVHGGGPEINNWLGRLN 463
FIQ+FRGKT+VVKYGGAAMKSPELQ+SVI DLVLLSCVGLRPV+VHGGGPEIN+WLGR+
Sbjct: 78 FIQRFRGKTVVVKYGGAAMKSPELQSSVIRDLVLLSCVGLRPVLVHGGGPEINSWLGRVG 137
Query: 464 IQAVFRDGLRVTDAETMEIVSMVLVGKVNKTLVSLINXAGAT 589
++ FR+GLRVTDA TME+V MVLVGKVNK LVSLI+ AGAT
Sbjct: 138 VEPQFRNGLRVTDALTMEVVEMVLVGKVNKQLVSLISVAGAT 179
>ref|NP_191315.1| acetylglutamate kinase-like protein; protein id: At3g57560.1,
supported by cDNA: 40830., supported by cDNA:
gi_21280876 [Arabidopsis thaliana]
gi|11260723|pir||T46192 acetylglutamate kinase-like
protein - Arabidopsis thaliana
gi|6706427|emb|CAB66113.1| acetylglutamate kinase-like
protein [Arabidopsis thaliana]
gi|14334868|gb|AAK59612.1| putative acetylglutamate
kinase [Arabidopsis thaliana] gi|21280877|gb|AAM44949.1|
putative acetylglutamate kinase [Arabidopsis thaliana]
Length = 347
Score = 190 bits (483), Expect = 1e-47
Identities = 100/147 (68%), Positives = 115/147 (78%)
Frame = +2
Query: 149 PTTNLTFPSTAGRCSSAVHLPPTTTAAESLSPGQSRVDILAESLPFIQKFRGKTIVVKYG 328
PT N + V PP+ + SP RV+IL+ESLPFIQKFRGKTIVVKYG
Sbjct: 35 PTRNKNHHRLGFSIKATVSTPPSIATGNAPSPDY-RVEILSESLPFIQKFRGKTIVVKYG 93
Query: 329 GAAMKSPELQASVINDLVLLSCVGLRPVMVHGGGPEINNWLGRLNIQAVFRDGLRVTDAE 508
GAAM SPEL++SV++DLVLL+CVGLRP++VHGGGP+IN +L +LNI A FRDGLRVTDA
Sbjct: 94 GAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDAT 153
Query: 509 TMEIVSMVLVGKVNKTLVSLINXAGAT 589
TMEIVSMVLVGKVNK LVSLIN AGAT
Sbjct: 154 TMEIVSMVLVGKVNKNLVSLINAAGAT 180
>gb|AAM65613.1| acetylglutamate kinase-like protein [Arabidopsis thaliana]
Length = 347
Score = 190 bits (483), Expect = 1e-47
Identities = 100/147 (68%), Positives = 115/147 (78%)
Frame = +2
Query: 149 PTTNLTFPSTAGRCSSAVHLPPTTTAAESLSPGQSRVDILAESLPFIQKFRGKTIVVKYG 328
PT N + V PP+ + SP RV+IL+ESLPFIQKFRGKTIVVKYG
Sbjct: 35 PTRNKNHHRLGFSIKATVSTPPSIATGNAPSPDY-RVEILSESLPFIQKFRGKTIVVKYG 93
Query: 329 GAAMKSPELQASVINDLVLLSCVGLRPVMVHGGGPEINNWLGRLNIQAVFRDGLRVTDAE 508
GAAM SPEL++SV++DLVLL+CVGLRP++VHGGGP+IN +L +LNI A FRDGLRVTDA
Sbjct: 94 GAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDAT 153
Query: 509 TMEIVSMVLVGKVNKTLVSLINXAGAT 589
TMEIVSMVLVGKVNK LVSLIN AGAT
Sbjct: 154 TMEIVSMVLVGKVNKNLVSLINAAGAT 180
>ref|ZP_00073134.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 292
Score = 162 bits (410), Expect = 3e-39
Identities = 76/111 (68%), Positives = 95/111 (85%)
Frame = +2
Query: 251 SRVDILAESLPFIQKFRGKTIVVKYGGAAMKSPELQASVINDLVLLSCVGLRPVMVHGGG 430
SRV +L+E+LP+IQKF G+ IVVKYGGAAM+ ++ V+ D+VLLSCVG+RP++VHGGG
Sbjct: 14 SRVKVLSEALPYIQKFTGRKIVVKYGGAAMRDSNVKDQVMRDIVLLSCVGIRPIVVHGGG 73
Query: 431 PEINNWLGRLNIQAVFRDGLRVTDAETMEIVSMVLVGKVNKTLVSLINXAG 583
PEIN+WLG+L I+ F+DGLRVTDA TME+V MVLVGKVNK +VSLIN AG
Sbjct: 74 PEINSWLGKLGIEPQFKDGLRVTDASTMEVVEMVLVGKVNKEIVSLINQAG 124
>ref|NP_485288.1| acetylglutamate kinase [Nostoc sp. PCC 7120]
gi|21541967|sp|Q8YXG8|ARGB_ANASP Acetylglutamate kinase
(NAG kinase) (AGK) (N-acetyl-L-glutamate
5-phosphotransferase) gi|25288177|pir||AB1962
acetylglutamate kinase [imported] - Nostoc sp. (strain
PCC 7120) gi|17130592|dbj|BAB73202.1| acetylglutamate
kinase [Nostoc sp. PCC 7120]
Length = 297
Score = 159 bits (403), Expect = 2e-38
Identities = 74/111 (66%), Positives = 95/111 (84%)
Frame = +2
Query: 251 SRVDILAESLPFIQKFRGKTIVVKYGGAAMKSPELQASVINDLVLLSCVGLRPVMVHGGG 430
+RV +L+E+LP+IQ+F G+T+VVKYGGAAMK L+ VI D+V LSCVGLRP++VHGGG
Sbjct: 15 TRVQVLSEALPYIQQFAGRTVVVKYGGAAMKDSHLKDQVIRDIVFLSCVGLRPILVHGGG 74
Query: 431 PEINNWLGRLNIQAVFRDGLRVTDAETMEIVSMVLVGKVNKTLVSLINXAG 583
PEIN+WL +L I+A F++GLRVTDA TM++V MVLVG+VNK +VSLIN AG
Sbjct: 75 PEINSWLDKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAG 125
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,020,659
Number of Sequences: 1393205
Number of extensions: 14618192
Number of successful extensions: 76785
Number of sequences better than 10.0: 722
Number of HSP's better than 10.0 without gapping: 56690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70513
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
