Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010903A_C01 KMC010903A_c01
(494 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM19353.1|AF369886_1 TIR-similar-domain-containing protein T... 85 5e-16
gb|AAO23066.1| R 3 protein [Glycine max] 73 2e-12
gb|AAO23072.1| R 14 protein [Glycine max] 72 4e-12
gb|AAO23069.1| R 4 protein [Glycine max] 71 6e-12
gb|AAO23074.1| R 10 protein [Glycine max] 69 3e-11
>gb|AAM19353.1|AF369886_1 TIR-similar-domain-containing protein TSDC [Pisum sativum]
Length = 464
Score = 84.7 bits (208), Expect = 5e-16
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = -1
Query: 491 QLVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQGEHITE 312
QLVWPIFY++ SD+ N K YG M HEN FG DSE+VQKWKSAL E+ L G +
Sbjct: 379 QLVWPIFYKVEPSDIRNMRKCYGKDMARHENIFGVDSERVQKWKSALGEVCNLSGMAYSI 438
Query: 311 NEYEYKLIQKIVEKALAVQNHM 246
+EY+ QKIVE A +++ +
Sbjct: 439 G-FEYEFFQKIVEHANDIRSRL 459
>gb|AAO23066.1| R 3 protein [Glycine max]
Length = 897
Score = 72.8 bits (177), Expect = 2e-12
Identities = 36/74 (48%), Positives = 46/74 (61%), Gaps = 1/74 (1%)
Frame = -1
Query: 488 LVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQGEHITEN 309
LV P+FY + SDV Q SYG AM H+ F EK+QKW+ AL ++A L G H +
Sbjct: 99 LVIPVFYNVDPSDVRQQKGSYGEAMAKHQKRFKAKKEKLQKWRMALHQVADLSGYHFKDG 158
Query: 308 E-YEYKLIQKIVEK 270
+ YEYK IQ IVE+
Sbjct: 159 DAYEYKFIQSIVEQ 172
>gb|AAO23072.1| R 14 protein [Glycine max]
Length = 641
Score = 71.6 bits (174), Expect = 4e-12
Identities = 34/74 (45%), Positives = 47/74 (62%), Gaps = 1/74 (1%)
Frame = -1
Query: 488 LVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQGEHITEN 309
LV P+FY + SD+ +Q SYG AM+ H+ F EK+QKW+ AL ++A L G H +
Sbjct: 99 LVIPVFYNVDPSDLRHQKGSYGEAMIKHQKRFESKMEKLQKWRMALKQVADLSGHHFKDG 158
Query: 308 E-YEYKLIQKIVEK 270
+ YEYK I IVE+
Sbjct: 159 DAYEYKFIGSIVEE 172
>gb|AAO23069.1| R 4 protein [Glycine max]
Length = 895
Score = 71.2 bits (173), Expect = 6e-12
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = -1
Query: 488 LVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQGEHITEN 309
LV P+FY++ SDV +Q SYG AM H+ F EK+QKW+ AL ++A L G H +
Sbjct: 99 LVIPVFYKVDPSDVRHQKGSYGEAMAKHQKRFKAKKEKLQKWRMALKQVADLSGYHFEDG 158
Query: 308 E-YEYKLIQKIVEK 270
+ YEYK I IVE+
Sbjct: 159 DAYEYKFIGSIVEE 172
>gb|AAO23074.1| R 10 protein [Glycine max]
Length = 901
Score = 68.9 bits (167), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (61%), Gaps = 1/74 (1%)
Frame = -1
Query: 488 LVWPIFYEISXSDVSNQTKSYGHAMLAHENSFGKDSEKVQKWKSALSEMAFLQGEHITEN 309
LV P+FY + SDV +Q SYG M H+ F EK+QKW+ AL ++A L G H +
Sbjct: 99 LVIPVFYNVDPSDVRHQKGSYGVEMAKHQKRFKAKKEKLQKWRIALKQVADLCGYHFKDG 158
Query: 308 E-YEYKLIQKIVEK 270
+ YEYK IQ IVE+
Sbjct: 159 DAYEYKFIQSIVEQ 172
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 394,434,827
Number of Sequences: 1393205
Number of extensions: 7724748
Number of successful extensions: 22587
Number of sequences better than 10.0: 227
Number of HSP's better than 10.0 without gapping: 21799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22504
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
