Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010895A_C01 KMC010895A_c01
(719 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_210136.1| similar to insulin-like growth factor binding p... 34 1.8
gb|AAB65427.1| MAGC [Magnaporthe grisea] 32 8.9
>ref|XP_210136.1| similar to insulin-like growth factor binding protein, acid labile
subunit; INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN
COMPLEX ACID LABILE CHAIN PRECURSOR [Homo sapiens]
Length = 327
Score = 34.3 bits (77), Expect = 1.8
Identities = 20/48 (41%), Positives = 27/48 (55%), Gaps = 3/48 (6%)
Frame = +2
Query: 566 SPRDYCCNTM*KSQVLQLKRLRRRANPWPQRLNESIQLE---LSRFGG 700
SPR YC + Q L+L+ L+ +A P P RL E + LE + FGG
Sbjct: 228 SPRPYCITGLPSLQELKLQALQSQACPCPVRLEELVGLETLSAAAFGG 275
>gb|AAB65427.1| MAGC [Magnaporthe grisea]
Length = 355
Score = 32.0 bits (71), Expect = 8.9
Identities = 17/52 (32%), Positives = 26/52 (49%), Gaps = 5/52 (9%)
Frame = +2
Query: 281 LLHWEIVMNTSWYFFGLLVLLLVRSKAFK----KQPLT-HGLSPVFGPDFFW 421
L+ WE + N+ W+ L+L L + FK K P+T +G + GP W
Sbjct: 248 LMLWESIANSHWFTKSALILFLNKMDLFKEKITKSPITEYGFTDYHGPSDDW 299
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 607,723,434
Number of Sequences: 1393205
Number of extensions: 13248544
Number of successful extensions: 32093
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32084
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33499052993
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
