Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010854A_C01 KMC010854A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B84553 probable protein kinase/endoribonuclease [imported] ... 89 3e-17
ref|NP_565419.1| putative protein kinase/endoribonuclease; prote... 89 3e-17
dbj|BAB63366.1| Ire1 homolog-1 [Arabidopsis thaliana] 80 2e-14
ref|NP_568444.1| putative protein; protein id: At5g24360.1, supp... 80 2e-14
dbj|BAB11229.1| gb|AAD32909.1~gene_id:K16H17.7~strong similarity... 80 2e-14
>pir||B84553 probable protein kinase/endoribonuclease [imported] - Arabidopsis
thaliana
Length = 393
Score = 89.4 bits (220), Expect = 3e-17
Identities = 38/57 (66%), Positives = 51/57 (88%)
Frame = -2
Query: 582 NHYRELPQEIQELLGPVPEGFNDYFASRFPRLLIEVYKVICLYCKDDECFQRYFRGD 412
NH+RELP EIQEL+G VPEGF++YFA RFP+LLIEVY+VI L+C+++E F++YF+ D
Sbjct: 335 NHHRELPPEIQELVGTVPEGFDEYFAVRFPKLLIEVYRVISLHCREEEVFRKYFKCD 391
>ref|NP_565419.1| putative protein kinase/endoribonuclease; protein id: At2g17520.1,
supported by cDNA: gi_13194577, supported by cDNA:
gi_15277138 [Arabidopsis thaliana]
gi|13194578|gb|AAK15470.1|AF308596_1
endoribonuclease/protein kinase IRE1-like protein
[Arabidopsis thaliana] gi|15277139|dbj|BAB63367.1| Ire1
homolog-2 [Arabidopsis thaliana]
gi|20198262|gb|AAD32909.2| putative protein
kinase/endoribonuclease [Arabidopsis thaliana]
Length = 841
Score = 89.4 bits (220), Expect = 3e-17
Identities = 38/57 (66%), Positives = 51/57 (88%)
Frame = -2
Query: 582 NHYRELPQEIQELLGPVPEGFNDYFASRFPRLLIEVYKVICLYCKDDECFQRYFRGD 412
NH+RELP EIQEL+G VPEGF++YFA RFP+LLIEVY+VI L+C+++E F++YF+ D
Sbjct: 783 NHHRELPPEIQELVGTVPEGFDEYFAVRFPKLLIEVYRVISLHCREEEVFRKYFKCD 839
>dbj|BAB63366.1| Ire1 homolog-1 [Arabidopsis thaliana]
Length = 881
Score = 79.7 bits (195), Expect = 2e-14
Identities = 35/53 (66%), Positives = 44/53 (82%)
Frame = -2
Query: 582 NHYRELPQEIQELLGPVPEGFNDYFASRFPRLLIEVYKVICLYCKDDECFQRY 424
NHYRELP+E+QELLG VPEGF YF+SRFP+LLI+VY V+ YC ++E F +Y
Sbjct: 823 NHYRELPKELQELLGSVPEGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKY 875
>ref|NP_568444.1| putative protein; protein id: At5g24360.1, supported by cDNA:
gi_15277136, supported by cDNA: gi_15982746, supported
by cDNA: gi_16506692 [Arabidopsis thaliana]
gi|15982747|gb|AAL09714.1| AT5g24360/K16H17_7
[Arabidopsis thaliana] gi|16506693|gb|AAL17714.1|
endoribonuclease/protein kinase Ire1p-like protein
[Arabidopsis thaliana]
Length = 881
Score = 79.7 bits (195), Expect = 2e-14
Identities = 35/53 (66%), Positives = 44/53 (82%)
Frame = -2
Query: 582 NHYRELPQEIQELLGPVPEGFNDYFASRFPRLLIEVYKVICLYCKDDECFQRY 424
NHYRELP+E+QELLG VPEGF YF+SRFP+LLI+VY V+ YC ++E F +Y
Sbjct: 823 NHYRELPKELQELLGSVPEGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKY 875
>dbj|BAB11229.1| gb|AAD32909.1~gene_id:K16H17.7~strong similarity to unknown protein
[Arabidopsis thaliana]
Length = 939
Score = 79.7 bits (195), Expect = 2e-14
Identities = 35/53 (66%), Positives = 44/53 (82%)
Frame = -2
Query: 582 NHYRELPQEIQELLGPVPEGFNDYFASRFPRLLIEVYKVICLYCKDDECFQRY 424
NHYRELP+E+QELLG VPEGF YF+SRFP+LLI+VY V+ YC ++E F +Y
Sbjct: 881 NHYRELPKELQELLGSVPEGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKY 933
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,391,721
Number of Sequences: 1393205
Number of extensions: 9551836
Number of successful extensions: 18361
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18358
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
