Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010846A_C01 KMC010846A_c01
(516 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P37276|DYHC_DROME DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) gi|107... 33 1.9
ref|NP_523929.2| Dynein heavy chain 64C CG7507-PA gi|23093035|gb... 33 1.9
gb|AAK92925.1| GH15453p [Drosophila melanogaster] 33 1.9
gb|AAM61287.1| beta-ketoacyl-CoA synthase like protein [Arabidop... 32 4.3
ref|NP_190784.1| beta-ketoacyl-CoA synthase like protein; protei... 32 4.3
>sp|P37276|DYHC_DROME DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) gi|1079070|pir||A54794 dynein
heavy chain, cytosolic - fruit fly (Drosophila
melanogaster) gi|349669|gb|AAA60323.1| cytoplasmic dynein
heavy chian
Length = 4639
Score = 33.1 bits (74), Expect = 1.9
Identities = 20/63 (31%), Positives = 31/63 (48%)
Frame = -3
Query: 340 DYFLRDRLGTLKNPKFIYDMVTKQMSSFFRTIKTWFSVCE*EMPLFPNLLESVNTIGHVG 161
++FLR R G L NP + + +Q+ S R +P+F LLE V +I +G
Sbjct: 3891 NFFLRSREGLLANPTPVEGLSAEQIESVNRLAL--------RLPIFRKLLEKVRSIPELG 3942
Query: 160 CYL 152
+L
Sbjct: 3943 AWL 3945
>ref|NP_523929.2| Dynein heavy chain 64C CG7507-PA gi|23093035|gb|AAF47942.3| CG7507-PA
[Drosophila melanogaster]
Length = 4639
Score = 33.1 bits (74), Expect = 1.9
Identities = 20/63 (31%), Positives = 31/63 (48%)
Frame = -3
Query: 340 DYFLRDRLGTLKNPKFIYDMVTKQMSSFFRTIKTWFSVCE*EMPLFPNLLESVNTIGHVG 161
++FLR R G L NP + + +Q+ S R +P+F LLE V +I +G
Sbjct: 3891 NFFLRSREGLLANPTPVEGLSAEQIESVNRLAL--------RLPIFRKLLEKVRSIPELG 3942
Query: 160 CYL 152
+L
Sbjct: 3943 AWL 3945
>gb|AAK92925.1| GH15453p [Drosophila melanogaster]
Length = 839
Score = 33.1 bits (74), Expect = 1.9
Identities = 20/63 (31%), Positives = 31/63 (48%)
Frame = -3
Query: 340 DYFLRDRLGTLKNPKFIYDMVTKQMSSFFRTIKTWFSVCE*EMPLFPNLLESVNTIGHVG 161
++FLR R G L NP + + +Q+ S R +P+F LLE V +I +G
Sbjct: 91 NFFLRSREGLLANPTPVEGLSAEQIESVNRLAL--------RLPIFRKLLEKVRSIPELG 142
Query: 160 CYL 152
+L
Sbjct: 143 AWL 145
>gb|AAM61287.1| beta-ketoacyl-CoA synthase like protein [Arabidopsis thaliana]
Length = 444
Score = 32.0 bits (71), Expect = 4.3
Identities = 15/29 (51%), Positives = 18/29 (61%)
Frame = -1
Query: 510 VTTNPVFLLSHMCQQFPHHLKITKMDVCE 424
+T + VFLL C + P HLKITK D E
Sbjct: 76 LTPSSVFLLDFSCYRPPDHLKITKSDFIE 104
>ref|NP_190784.1| beta-ketoacyl-CoA synthase like protein; protein id: At3g52160.1,
supported by cDNA: 115725. [Arabidopsis thaliana]
gi|11357196|pir||T49095 beta-ketoacyl-CoA synthase like
protein - Arabidopsis thaliana
gi|4678945|emb|CAB41336.1| beta-ketoacyl-CoA synthase
like protein [Arabidopsis thaliana]
Length = 451
Score = 32.0 bits (71), Expect = 4.3
Identities = 15/29 (51%), Positives = 18/29 (61%)
Frame = -1
Query: 510 VTTNPVFLLSHMCQQFPHHLKITKMDVCE 424
+T + VFLL C + P HLKITK D E
Sbjct: 83 LTPSSVFLLDFSCYRPPDHLKITKSDFIE 111
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 439,837,192
Number of Sequences: 1393205
Number of extensions: 8894992
Number of successful extensions: 17242
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17238
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
