Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010778A_C01 KMC010778A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172776.1| putative oxysterol-binding protein; protein id:... 183 1e-45
gb|AAK15443.1|AC037426_5 putative oxysterol-binding protein [Ory... 163 1e-39
gb|AAM97165.1| putative oxysterol binding protein [Oryza sativa ... 163 1e-39
ref|NP_180659.1| putative oxysterol-binding protein; protein id:... 160 9e-39
gb|AAM98072.1| AT4g08180/T12G13_20 [Arabidopsis thaliana] 156 1e-37
>ref|NP_172776.1| putative oxysterol-binding protein; protein id: At1g13170.1
[Arabidopsis thaliana] gi|25295691|pir||A86266
hypothetical protein F3F19.19 [imported] - Arabidopsis
thaliana gi|4850400|gb|AAD31070.1|AC007357_19 Similar to
gb|M86917 oxysterol-binding protein from Homo sapiens.
[Arabidopsis thaliana]
gi|18087546|gb|AAL58905.1|AF462814_1 At1g13170/F3F19_19
[Arabidopsis thaliana]
Length = 816
Score = 183 bits (464), Expect = 1e-45
Identities = 84/109 (77%), Positives = 96/109 (88%)
Frame = -2
Query: 533 RDNYVSETRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELPNAEKLRLE 354
RD ++TRYNLSPFAISLNEITPG+ +KLPPTDSRLRPDQRHLENGEYE NAEKLRLE
Sbjct: 690 RDKSPTKTRYNLSPFAISLNEITPGMIDKLPPTDSRLRPDQRHLENGEYESANAEKLRLE 749
Query: 353 QLQRQARKMPERGCQPRWFKKDEDGCYRYMGGYWEEREKSNWDGIPDIF 207
QLQRQAR++ E+G +PRWF+KDE+G YRY+GGYWE REK +WD I DIF
Sbjct: 750 QLQRQARRLQEKGWKPRWFEKDEEGNYRYLGGYWEAREKKDWDRITDIF 798
>gb|AAK15443.1|AC037426_5 putative oxysterol-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 742
Score = 163 bits (412), Expect = 1e-39
Identities = 77/106 (72%), Positives = 87/106 (81%), Gaps = 1/106 (0%)
Frame = -2
Query: 512 TRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELPNAEKLRLEQLQRQAR 333
TRYNLS FAI+LNE+TPGL EKLPPTDSRLRPDQRHLENGEYE N+EKLRLE QR AR
Sbjct: 627 TRYNLSSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANSEKLRLETRQRMAR 686
Query: 332 KMPERGCQPRWFKKD-EDGCYRYMGGYWEEREKSNWDGIPDIFGQS 198
KM E G +PRWF++D EDG +RY+GGYWE RE+ W G DIFG +
Sbjct: 687 KMQESGWKPRWFQRDTEDGTFRYVGGYWEAREQRKWVGCNDIFGNN 732
>gb|AAM97165.1| putative oxysterol binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 772
Score = 163 bits (412), Expect = 1e-39
Identities = 78/105 (74%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Frame = -2
Query: 512 TRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELPNAEKLRLEQLQRQAR 333
TRYN + FAI+LNE+T GL EKLPPTDSRLRPDQR LENGEYE NAEKLRLEQ QRQAR
Sbjct: 659 TRYNFTRFAITLNELTAGLKEKLPPTDSRLRPDQRCLENGEYERANAEKLRLEQRQRQAR 718
Query: 332 KMPERGCQPRWFKKDE-DGCYRYMGGYWEEREKSNWDGIPDIFGQ 201
KM E G +PRWF KD+ YRY+GGYWE REK +W+G PDIFGQ
Sbjct: 719 KMQESGWKPRWFAKDKATDTYRYLGGYWESREKGSWEGCPDIFGQ 763
>ref|NP_180659.1| putative oxysterol-binding protein; protein id: At2g31020.1
[Arabidopsis thaliana] gi|25295692|pir||E84715 probable
oxysterol-binding protein [imported] - Arabidopsis
thaliana gi|3201627|gb|AAC20736.1| putative
oxysterol-binding protein [Arabidopsis thaliana]
Length = 760
Score = 160 bits (405), Expect = 9e-39
Identities = 73/105 (69%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Frame = -2
Query: 512 TRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELPNAEKLRLEQLQRQAR 333
T+YNL+ F I+LNE+TPGL EKLPPTDSRLRPDQR+LE GEYE+ NAEKLRLEQ QRQAR
Sbjct: 650 TKYNLTRFGITLNELTPGLKEKLPPTDSRLRPDQRYLEKGEYEMGNAEKLRLEQRQRQAR 709
Query: 332 KMPERGCQPRWFKKDEDG-CYRYMGGYWEEREKSNWDGIPDIFGQ 201
+M ERG +P+WF+K++ YRY+GGYWE R+ +WD PDIFGQ
Sbjct: 710 EMQERGWKPKWFRKEKGSETYRYIGGYWEARDSGSWDDCPDIFGQ 754
>gb|AAM98072.1| AT4g08180/T12G13_20 [Arabidopsis thaliana]
Length = 814
Score = 156 bits (395), Expect = 1e-37
Identities = 73/104 (70%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Frame = -2
Query: 512 TRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELPNAEKLRLEQLQRQAR 333
T+YNL+ FAI+LNE+TPGL E+LPPTDSRLRPDQR+LENGE+E+ N EKLRLEQ QRQAR
Sbjct: 701 TKYNLTRFAITLNELTPGLKERLPPTDSRLRPDQRYLENGEFEMANTEKLRLEQRQRQAR 760
Query: 332 KMPERGCQPRWFKKDEDG-CYRYMGGYWEEREKSNWDGIPDIFG 204
KM ERG +PRWF K++ YRY GGYWE RE +W PDIFG
Sbjct: 761 KMQERGWKPRWFMKEKGSESYRYKGGYWEAREDGSWVDCPDIFG 804
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,027,062
Number of Sequences: 1393205
Number of extensions: 10337737
Number of successful extensions: 32383
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 31112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32283
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
