Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010770A_C01 KMC010770A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197965.1| receptor-like protein kinase - like; protein id... 117 3e-28
dbj|BAB91929.1| putative receptor-like kinase [Oryza sativa (jap... 94 2e-19
ref|NP_201198.1| leucine-rich repeat transmembrane protein kinas... 69 7e-13
ref|NP_173166.1| putative leucine-rich receptor protein kinase; ... 69 1e-12
ref|NP_180875.1| putative receptor-like protein kinase; protein ... 66 2e-11
>ref|NP_197965.1| receptor-like protein kinase - like; protein id: At5g25930.1
[Arabidopsis thaliana]
gi|5107831|gb|AAD40144.1|AF149413_25 contains similarity
to protein kinase domains (Pfam F00069, Score=162.6,
E=6.8e-45, N=1) and leucien rich repeats (Pfam PF00560,
Score=210.7, E=2.2e-59, N=10) [Arabidopsis thaliana]
gi|28393326|gb|AAO42089.1| putative receptor protein
kinase [Arabidopsis thaliana]
Length = 1005
Score = 117 bits (293), Expect(2) = 3e-28
Identities = 66/106 (62%), Positives = 73/106 (68%)
Frame = -2
Query: 494 SFGVVLLELVTGREPNNAGEHGGSLVDWVWQHFSEGKCLSGAFDEGIKETRHAEEMTTVV 315
SFGVVLLELVTGRE NN EH +L DW W+H+ GK + AFDE IKE E MTTV
Sbjct: 882 SFGVVLLELVTGREGNNGDEHT-NLADWSWKHYQSGKPTAEAFDEDIKEASTTEAMTTVF 940
Query: 314 KLGLMCTSSLPSTRPSMKEVLQVLRQSCSHGSAHKRVATEFDITPL 177
KLGLMCT++LPS RPSMKEVL VLRQ A K+ ATE PL
Sbjct: 941 KLGLMCTNTLPSHRPSMKEVLYVLRQQGL--EATKKTATEAYEAPL 984
Score = 29.3 bits (64), Expect(2) = 3e-28
Identities = 12/17 (70%), Positives = 14/17 (81%)
Frame = -3
Query: 544 ELHSMSALTGSFGYIPP 494
E H+MSA+ GSFGYI P
Sbjct: 850 EPHTMSAVAGSFGYIAP 866
>dbj|BAB91929.1| putative receptor-like kinase [Oryza sativa (japonica
cultivar-group)]
Length = 1063
Score = 94.0 bits (232), Expect(2) = 2e-19
Identities = 50/117 (42%), Positives = 74/117 (62%), Gaps = 4/117 (3%)
Frame = -2
Query: 494 SFGVVLLELVTGREPNNAGEHGGSLVDWVWQHFSEGKCLSGAFDEGIKETRHAEEMTTVV 315
SFGVVLLEL TG+ N+ GEHG SL DW H+ G+ + A D+ I+ +++E+ V
Sbjct: 924 SFGVVLLELTTGKAANDGGEHG-SLADWARHHYQSGESIPDATDQCIRYAGYSDEIEVVF 982
Query: 314 KLGLMCTSSLPSTRPSMKEVLQVLRQSCSHGSAHKRVA----TEFDITPLSWGYRGT 156
+LG+MCT + P++RP+MK+VLQ+L CS + K A E+++ PL RG+
Sbjct: 983 RLGVMCTGATPASRPTMKDVLQIL-VKCSEQTHQKCKAESGQEEYEVAPLLLPQRGS 1038
Score = 23.1 bits (48), Expect(2) = 2e-19
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 547 GELHSMSALTGSFGYIPP 494
G ++SA+ GSFGY+ P
Sbjct: 891 GTPDTVSAVAGSFGYMAP 908
>ref|NP_201198.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g63930.1 [Arabidopsis thaliana]
gi|8777306|dbj|BAA96896.1| receptor-like protein kinase
[Arabidopsis thaliana]
Length = 1102
Score = 68.9 bits (167), Expect(2) = 7e-13
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = -2
Query: 494 SFGVVLLELVTGREPNNAGEHGGSLVDWVWQHFSEGKCLSGAFDE--GIKETRHAEEMTT 321
S+GVVLLEL+TG+ P + GG +V+WV + SG D +++ R M T
Sbjct: 993 SYGVVLLELLTGKAPVQPIDQGGDVVNWVRSYIRRDALSSGVLDARLTLEDERIVSHMLT 1052
Query: 320 VVKLGLMCTSSLPSTRPSMKEVLQVLRQSCSHGSAHKRVATE 195
V+K+ L+CTS P RPSM++V+ +L +S + + TE
Sbjct: 1053 VLKIALLCTSVSPVARPSMRQVVLMLIESERSEGEQEHLDTE 1094
Score = 25.8 bits (55), Expect(2) = 7e-13
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 535 SMSALTGSFGYIPP 494
SMSA+ GS+GYI P
Sbjct: 964 SMSAIAGSYGYIAP 977
>ref|NP_173166.1| putative leucine-rich receptor protein kinase; protein id:
At1g17230.1 [Arabidopsis thaliana]
gi|25518557|pir||E86308 hypothetical protein F20D23.7 -
Arabidopsis thaliana gi|5734762|gb|AAD50027.1|AC007651_22
Similar to leucine-rich receptor-like protein kinase
[Arabidopsis thaliana]
Length = 1133
Score = 68.9 bits (167), Expect(2) = 1e-12
Identities = 41/108 (37%), Positives = 63/108 (57%), Gaps = 2/108 (1%)
Frame = -2
Query: 494 SFGVVLLELVTGREPNNAGEHGGSLVDWVWQHFSEGKCLSGAFDEGI--KETRHAEEMTT 321
SFGVVLLEL+TG+ P E GG LV+WV + FD + + R EM+
Sbjct: 987 SFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEMFDARLDTNDKRTVHEMSL 1046
Query: 320 VVKLGLMCTSSLPSTRPSMKEVLQVLRQSCSHGSAHKRVATEFDITPL 177
V+K+ L CTS+ P++RP+M+EV+ ++ + + GS+ ++ TPL
Sbjct: 1047 VLKIALFCTSNSPASRPTMREVVAMITE--ARGSSSLSSSSITSETPL 1092
Score = 25.4 bits (54), Expect(2) = 1e-12
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 535 SMSALTGSFGYIPP 494
SMSA+ GS+GYI P
Sbjct: 958 SMSAVAGSYGYIAP 971
>ref|NP_180875.1| putative receptor-like protein kinase; protein id: At2g33170.1
[Arabidopsis thaliana] gi|25408249|pir||B84742 probable
receptor-like protein kinase [imported] - Arabidopsis
thaliana gi|2924777|gb|AAC04906.1| putative receptor-like
protein kinase [Arabidopsis thaliana]
Length = 1124
Score = 66.2 bits (160), Expect(2) = 2e-11
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Frame = -2
Query: 494 SFGVVLLELVTGREPNNAGEHGGSLVDWVWQHFSEGKCLSGAFDEGIKETRH---AEEMT 324
SFGVVLLEL+TG+ P E GG L W H + S D + + M
Sbjct: 1013 SFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMI 1072
Query: 323 TVVKLGLMCTSSLPSTRPSMKEVLQVLRQS 234
TV K+ ++CT S PS RP+M+EV+ +L +S
Sbjct: 1073 TVTKIAVLCTKSSPSDRPTMREVVLMLIES 1102
Score = 23.9 bits (50), Expect(2) = 2e-11
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 535 SMSALTGSFGYIPP 494
S+SA+ GS+GYI P
Sbjct: 984 SVSAVAGSYGYIAP 997
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,137,983
Number of Sequences: 1393205
Number of extensions: 9802657
Number of successful extensions: 34330
Number of sequences better than 10.0: 1306
Number of HSP's better than 10.0 without gapping: 32059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33473
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
