Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC010769A_C01 KMC010769A_c01
(476 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_186921.1| expressed protein; protein id: At3g02720.1 [Ara... 126 1e-28
gb|AAK26033.2|AF360323_1 unknown protein [Arabidopsis thaliana] 126 1e-28
ref|ZP_00130315.1| hypothetical protein [Desulfovibrio desulfuri... 63 1e-09
ref|NP_698201.1| ThiJ/PfpI family protein [Brucella suis 1330] g... 61 7e-09
ref|NP_539710.1| PROTEASE I [Brucella melitensis] gi|25322940|pi... 61 7e-09
>ref|NP_186921.1| expressed protein; protein id: At3g02720.1 [Arabidopsis thaliana]
gi|6728990|gb|AAF26988.1|AC018363_33 unknown protein
[Arabidopsis thaliana] gi|24030368|gb|AAN41347.1|
unknown protein [Arabidopsis thaliana]
Length = 388
Score = 126 bits (316), Expect = 1e-28
Identities = 56/63 (88%), Positives = 59/63 (92%)
Frame = -2
Query: 352 QGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQ 173
+GRKCTAYPAVKLNVVL G TWLEPDPI RCFTDGNLVTGAAWPGHPEF+SQLM LLGIQ
Sbjct: 326 KGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLGIQ 385
Query: 172 ISF 164
+SF
Sbjct: 386 VSF 388
Score = 62.4 bits (150), Expect = 2e-09
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -2
Query: 349 GRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQI 170
GRKCTAY V ++V +GA W+EP C DG+L+T A + GHPEFI + LG +I
Sbjct: 134 GRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATYEGHPEFIQLFVKALGGKI 193
Query: 169 S 167
+
Sbjct: 194 T 194
>gb|AAK26033.2|AF360323_1 unknown protein [Arabidopsis thaliana]
Length = 324
Score = 126 bits (316), Expect = 1e-28
Identities = 56/63 (88%), Positives = 59/63 (92%)
Frame = -2
Query: 352 QGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQ 173
+GRKCTAYPAVKLNVVL G TWLEPDPI RCFTDGNLVTGAAWPGHPEF+SQLM LLGIQ
Sbjct: 262 KGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLGIQ 321
Query: 172 ISF 164
+SF
Sbjct: 322 VSF 324
Score = 62.4 bits (150), Expect = 2e-09
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -2
Query: 349 GRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQI 170
GRKCTAY V ++V +GA W+EP C DG+L+T A + GHPEFI + LG +I
Sbjct: 70 GRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATYEGHPEFIQLFVKALGGKI 129
Query: 169 S 167
+
Sbjct: 130 T 130
>ref|ZP_00130315.1| hypothetical protein [Desulfovibrio desulfuricans G20]
Length = 255
Score = 63.2 bits (152), Expect = 1e-09
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -2
Query: 352 QGRKCTAYPAVKLNVVLSGATWLE-PDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGI 176
QG CTAYPAVK +V +GATW E D S G++VT AWP HPE++ + + +LG
Sbjct: 192 QGHTCTAYPAVKPDVEAAGATWCEVNDTASNACVSGHVVTAPAWPAHPEWMRKFLEVLGT 251
Query: 175 QI 170
+I
Sbjct: 252 RI 253
>ref|NP_698201.1| ThiJ/PfpI family protein [Brucella suis 1330]
gi|23348032|gb|AAN30116.1|AE014420_1 ThiJ/PfpI family
protein [Brucella suis 1330]
Length = 194
Score = 60.8 bits (146), Expect = 7e-09
Identities = 28/62 (45%), Positives = 41/62 (65%)
Frame = -2
Query: 352 QGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQ 173
+GR C+AYPA + V L+G + + I + TDGNLVT AWP HP ++SQ + +LG +
Sbjct: 132 EGRTCSAYPACRPEVELAGGKYADI-AIDQAVTDGNLVTSPAWPAHPAWLSQFLAVLGTK 190
Query: 172 IS 167
I+
Sbjct: 191 IT 192
>ref|NP_539710.1| PROTEASE I [Brucella melitensis] gi|25322940|pir||AC3351 proteinase
I (EC 3.4.-.-) [imported] - Brucella melitensis (strain
16M) gi|17982734|gb|AAL51974.1| PROTEASE I [Brucella
melitensis 16M]
Length = 214
Score = 60.8 bits (146), Expect = 7e-09
Identities = 28/62 (45%), Positives = 41/62 (65%)
Frame = -2
Query: 352 QGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQ 173
+GR C+AYPA + V L+G + + I + TDGNLVT AWP HP ++SQ + +LG +
Sbjct: 152 EGRTCSAYPACRPEVELAGGKYADI-AIDQAVTDGNLVTSPAWPAHPAWLSQFLAVLGTK 210
Query: 172 IS 167
I+
Sbjct: 211 IT 212
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 399,617,470
Number of Sequences: 1393205
Number of extensions: 8039235
Number of successful extensions: 18907
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 18467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18864
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13106568690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
